Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 MIR144-201ENST00000384886 86 ntBASIC2.72□□□□□ -1.97
CCDC144BQ3MJ40 MIR520G-201ENST00000385064 90 ntBASIC2.72□□□□□ -1.97
CCDC144BQ3MJ40 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.72□□□□□ -1.97
CCDC144BQ3MJ40 SNORD127-201ENST00000458892 86 ntBASIC2.72□□□□□ -1.97
CCDC144BQ3MJ40 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.72□□□□□ -1.97
CCDC144BQ3MJ40 AL163195.1-201ENST00000496941 348 ntBASIC2.72□□□□□ -1.97
CCDC144BQ3MJ40 Y_RNA.668-201ENST00000516233 93 ntBASIC2.72□□□□□ -1.97
CCDC144BQ3MJ40 SNORA27.4-201ENST00000516650 95 ntBASIC2.72□□□□□ -1.97
CCDC144BQ3MJ40 SCARNA24.2-201ENST00000516968 130 ntBASIC2.72□□□□□ -1.97
CCDC144BQ3MJ40 AC136628.3-201ENST00000521868 290 ntBASIC2.72□□□□□ -1.97
CCDC144BQ3MJ40 AC062037.2-201ENST00000610137 73 ntBASIC2.72□□□□□ -1.97
CCDC144BQ3MJ40 MIR6895-201ENST00000613497 78 ntBASIC2.72□□□□□ -1.97
CCDC144BQ3MJ40 ZNF702P-202ENST00000434269 1966 ntBASIC2.72□□□□□ -1.97
CCDC144BQ3MJ40 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC144BQ3MJ40 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC144BQ3MJ40 RNU4-13P-201ENST00000364019 141 ntBASIC2.71□□□□□ -1.98
CCDC144BQ3MJ40 SNORA80E-201ENST00000384744 137 ntBASIC2.71□□□□□ -1.98
CCDC144BQ3MJ40 AL355497.1-201ENST00000406262 551 ntBASIC2.71□□□□□ -1.98
CCDC144BQ3MJ40 AC026436.1-201ENST00000510537 270 ntBASIC2.71□□□□□ -1.98
CCDC144BQ3MJ40 RNU7-128P-201ENST00000517247 62 ntBASIC2.71□□□□□ -1.98
CCDC144BQ3MJ40 MIR1273D-201ENST00000577266 86 ntBASIC2.71□□□□□ -1.98
CCDC144BQ3MJ40 MIR5694-201ENST00000581190 76 ntBASIC2.71□□□□□ -1.98
CCDC144BQ3MJ40 MIR4769-201ENST00000584126 77 ntBASIC2.71□□□□□ -1.98
CCDC144BQ3MJ40 AC073413.2-201ENST00000604332 360 ntBASIC2.71□□□□□ -1.98
CCDC144BQ3MJ40 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.71□□□□□ -1.98
CCDC144BQ3MJ40 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.71□□□□□ -1.98
CCDC144BQ3MJ40 MIR1291-201ENST00000627649 87 ntBASIC2.71□□□□□ -1.98
CCDC144BQ3MJ40 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC144BQ3MJ40 U6.108-201ENST00000637764 58 ntBASIC2.71□□□□□ -1.98
CCDC144BQ3MJ40 ZNF720P1-201ENST00000562403 1939 ntBASIC2.71□□□□□ -1.98
CCDC144BQ3MJ40 AC018630.2-201ENST00000534866 2403 ntBASIC2.71□□□□□ -1.98
CCDC144BQ3MJ40 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC144BQ3MJ40 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC144BQ3MJ40 Y_RNA.401-201ENST00000383965 117 ntBASIC2.7□□□□□ -1.98
CCDC144BQ3MJ40 MIR548H3-201ENST00000408771 118 ntBASIC2.7□□□□□ -1.98
CCDC144BQ3MJ40 AL162725.1-201ENST00000435405 301 ntBASIC2.7□□□□□ -1.98
CCDC144BQ3MJ40 RPS20P10-201ENST00000451209 253 ntBASIC2.7□□□□□ -1.98
CCDC144BQ3MJ40 AC091959.1-201ENST00000495857 238 ntBASIC2.7□□□□□ -1.98
CCDC144BQ3MJ40 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC144BQ3MJ40 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC144BQ3MJ40 AC005972.2-201ENST00000604690 348 ntBASIC2.7□□□□□ -1.98
CCDC144BQ3MJ40 AC005336.3-201ENST00000623833 2679 ntBASIC2.7□□□□□ -1.98
CCDC144BQ3MJ40 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
CCDC144BQ3MJ40 AC016717.2-201ENST00000609089 5141 ntBASIC2.69□□□□□ -1.98
CCDC144BQ3MJ40 UBE2WP1-201ENST00000362030 340 ntBASIC2.69□□□□□ -1.98
CCDC144BQ3MJ40 SNORA33-201ENST00000363664 130 ntBASIC2.69□□□□□ -1.98
CCDC144BQ3MJ40 Y_RNA.310-201ENST00000365063 113 ntBASIC2.69□□□□□ -1.98
CCDC144BQ3MJ40 Y_RNA.352-201ENST00000365439 102 ntBASIC2.69□□□□□ -1.98
CCDC144BQ3MJ40 RNU6-950P-201ENST00000384651 107 ntBASIC2.69□□□□□ -1.98
CCDC144BQ3MJ40 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CCDC144BQ3MJ40 RNU6-1132P-201ENST00000459214 107 ntBASIC2.69□□□□□ -1.98
CCDC144BQ3MJ40 RPL39P38-201ENST00000467018 153 ntBASIC2.69□□□□□ -1.98
CCDC144BQ3MJ40 RNU7-116P-201ENST00000516940 62 ntBASIC2.69□□□□□ -1.98
CCDC144BQ3MJ40 MIR4287-201ENST00000579398 78 ntBASIC2.69□□□□□ -1.98
CCDC144BQ3MJ40 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC144BQ3MJ40 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC144BQ3MJ40 Y_RNA.44-201ENST00000362676 108 ntBASIC2.68□□□□□ -1.98
CCDC144BQ3MJ40 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC144BQ3MJ40 MIR1289-2-201ENST00000408360 111 ntBASIC2.68□□□□□ -1.98
CCDC144BQ3MJ40 RNU2-7P-201ENST00000410794 178 ntBASIC2.68□□□□□ -1.98
CCDC144BQ3MJ40 Y_RNA.618-201ENST00000410949 107 ntBASIC2.68□□□□□ -1.98
CCDC144BQ3MJ40 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC144BQ3MJ40 AC245047.4-201ENST00000433189 144 ntBASIC2.68□□□□□ -1.98
CCDC144BQ3MJ40 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC144BQ3MJ40 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC144BQ3MJ40 RNA5SP481-201ENST00000516814 122 ntBASIC2.68□□□□□ -1.98
CCDC144BQ3MJ40 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC144BQ3MJ40 AL078604.3-201ENST00000615580 211 ntBASIC2.68□□□□□ -1.98
CCDC144BQ3MJ40 U2.14-201ENST00000615943 113 ntBASIC2.68□□□□□ -1.98
CCDC144BQ3MJ40 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC144BQ3MJ40 MIR6079-201ENST00000635807 62 ntBASIC2.68□□□□□ -1.98
CCDC144BQ3MJ40 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC144BQ3MJ40 Y_RNA.14-201ENST00000362415 103 ntBASIC2.67□□□□□ -1.98
CCDC144BQ3MJ40 SNORA63D-201ENST00000364359 132 ntBASIC2.67□□□□□ -1.98
CCDC144BQ3MJ40 RNA5SP511-201ENST00000410487 115 ntBASIC2.67□□□□□ -1.98
CCDC144BQ3MJ40 HSPE1P21-201ENST00000438283 308 ntBASIC2.67□□□□□ -1.98
CCDC144BQ3MJ40 U8.19-201ENST00000459095 133 ntBASIC2.67□□□□□ -1.98
CCDC144BQ3MJ40 Y_RNA.638-201ENST00000459374 113 ntBASIC2.67□□□□□ -1.98
CCDC144BQ3MJ40 RNA5SP57-201ENST00000459463 123 ntBASIC2.67□□□□□ -1.98
CCDC144BQ3MJ40 RNU6-341P-201ENST00000516973 96 ntBASIC2.67□□□□□ -1.98
CCDC144BQ3MJ40 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.67□□□□□ -1.98
CCDC144BQ3MJ40 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CCDC144BQ3MJ40 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC144BQ3MJ40 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC144BQ3MJ40 RNU6-112P-201ENST00000363599 104 ntBASIC2.66□□□□□ -1.98
CCDC144BQ3MJ40 SNORA16B-201ENST00000364674 135 ntBASIC2.66□□□□□ -1.98
CCDC144BQ3MJ40 RNU6-1323P-201ENST00000384025 107 ntBASIC2.66□□□□□ -1.98
CCDC144BQ3MJ40 Y_RNA.478-201ENST00000384358 107 ntBASIC2.66□□□□□ -1.98
CCDC144BQ3MJ40 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC144BQ3MJ40 RNU6-63P-201ENST00000516690 95 ntBASIC2.66□□□□□ -1.98
CCDC144BQ3MJ40 AC015720.1-201ENST00000565251 277 ntBASIC2.66□□□□□ -1.98
CCDC144BQ3MJ40 AP000942.4-201ENST00000604811 241 ntBASIC2.66□□□□□ -1.98
CCDC144BQ3MJ40 AC004832.4-201ENST00000608952 331 ntBASIC2.66□□□□□ -1.98
CCDC144BQ3MJ40 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC144BQ3MJ40 RNA5SP276-201ENST00000362580 94 ntBASIC2.65□□□□□ -1.99
CCDC144BQ3MJ40 Y_RNA.350-201ENST00000365409 98 ntBASIC2.65□□□□□ -1.99
CCDC144BQ3MJ40 RNU6-574P-201ENST00000384265 107 ntBASIC2.65□□□□□ -1.99
CCDC144BQ3MJ40 SNORD116-13-201ENST00000384408 92 ntBASIC2.65□□□□□ -1.99
CCDC144BQ3MJ40 Y_RNA.562-201ENST00000384695 113 ntBASIC2.65□□□□□ -1.99
CCDC144BQ3MJ40 RNU2-38P-201ENST00000410856 79 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms