Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNU6-1291P-201ENST00000516591 104 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 RNA5SP168-201ENST00000516642 112 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 RN7SKP88-201ENST00000516847 250 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.95□□□□□ -2.26
RFX4Q33E94 MIR3684-201ENST00000579779 74 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 SNORD114-21-201ENST00000606412 72 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 7SK.8-201ENST00000612110 250 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 7SK.11-201ENST00000615477 250 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 7SK.13-201ENST00000622040 250 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 AC005592.1-201ENST00000566527 1640 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 Y_RNA.267-201ENST00000364679 109 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 RNU6-1187P-201ENST00000364771 110 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 Y_RNA.327-201ENST00000365201 102 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 Y_RNA.338-201ENST00000365320 114 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 Y_RNA.361-201ENST00000365515 120 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 RNU6-424P-201ENST00000384367 105 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 RNU6-376P-201ENST00000384731 106 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 RNU5A-5P-201ENST00000411054 116 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 AC138393.2-201ENST00000414742 246 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 MTND4P28-201ENST00000426217 387 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.94□□□□□ -2.26
RFX4Q33E94 RPL30P15-201ENST00000457129 321 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 RPS23P4-201ENST00000487908 423 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 RNU6-408P-201ENST00000515910 100 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 RNU6-63P-201ENST00000516690 95 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 RNU6-922P-201ENST00000516753 99 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 RNU6-341P-201ENST00000516973 96 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 RNU2-12P-201ENST00000517216 168 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.94□□□□□ -2.26
RFX4Q33E94 AC023442.1-201ENST00000531247 422 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 MIR4498-201ENST00000577599 66 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 AL162424.1-201ENST00000602325 221 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 AL355073.2-201ENST00000612106 557 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.94□□□□□ -2.26
RFX4Q33E94 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.94□□□□□ -2.26
RFX4Q33E94 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.94□□□□□ -2.26
RFX4Q33E94 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
RFX4Q33E94 MIRLET7C-201ENST00000362160 84 ntBASIC0.93□□□□□ -2.26
RFX4Q33E94 RNU6-926P-201ENST00000384075 107 ntBASIC0.93□□□□□ -2.26
RFX4Q33E94 SNORD41-201ENST00000386967 70 ntBASIC0.93□□□□□ -2.26
RFX4Q33E94 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.93□□□□□ -2.26
RFX4Q33E94 AC093850.1-201ENST00000454121 251 ntBASIC0.93□□□□□ -2.26
RFX4Q33E94 RNU6-277P-201ENST00000516272 106 ntBASIC0.93□□□□□ -2.26
RFX4Q33E94 RNU6-917P-201ENST00000516294 104 ntBASIC0.93□□□□□ -2.26
RFX4Q33E94 RPL21P9-201ENST00000556149 474 ntBASIC0.93□□□□□ -2.26
RFX4Q33E94 AC004467.1-201ENST00000615678 330 ntBASIC0.93□□□□□ -2.26
RFX4Q33E94 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.93□□□□□ -2.26
RFX4Q33E94 AC127459.3-201ENST00000624328 466 ntBASIC0.93□□□□□ -2.26
RFX4Q33E94 AC099654.14-201ENST00000638599 341 ntBASIC0.93□□□□□ -2.26
RFX4Q33E94 Y_RNA.101-201ENST00000363154 102 ntBASIC0.92□□□□□ -2.26
RFX4Q33E94 SNORD115-30-201ENST00000364117 82 ntBASIC0.92□□□□□ -2.26
RFX4Q33E94 RNU4-76P-201ENST00000364509 141 ntBASIC0.92□□□□□ -2.26
RFX4Q33E94 Y_RNA.265-201ENST00000364677 108 ntBASIC0.92□□□□□ -2.26
RFX4Q33E94 RNU6-136P-201ENST00000384663 107 ntBASIC0.92□□□□□ -2.26
RFX4Q33E94 SNORA69.1-201ENST00000390904 137 ntBASIC0.92□□□□□ -2.26
RFX4Q33E94 RNA5SP475-201ENST00000410568 110 ntBASIC0.92□□□□□ -2.26
RFX4Q33E94 AC098614.3-201ENST00000438957 440 ntBASIC0.92□□□□□ -2.26
RFX4Q33E94 AC082651.2-201ENST00000496833 166 ntBASIC0.92□□□□□ -2.26
RFX4Q33E94 RNU6-470P-201ENST00000515954 104 ntBASIC0.92□□□□□ -2.26
RFX4Q33E94 RNU6-559P-201ENST00000516151 98 ntBASIC0.92□□□□□ -2.26
RFX4Q33E94 RNU6-966P-201ENST00000516479 104 ntBASIC0.92□□□□□ -2.26
RFX4Q33E94 RNU2-56P-201ENST00000516826 190 ntBASIC0.92□□□□□ -2.26
RFX4Q33E94 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.92□□□□□ -2.26
RFX4Q33E94 AC113139.1-201ENST00000605049 239 ntBASIC0.92□□□□□ -2.26
RFX4Q33E94 AL359821.1-201ENST00000605519 182 ntBASIC0.92□□□□□ -2.26
RFX4Q33E94 SNORA28-201ENST00000606769 126 ntBASIC0.92□□□□□ -2.26
RFX4Q33E94 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
RFX4Q33E94 AL391516.1-201ENST00000554380 2449 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 SNORD116-29-201ENST00000384516 83 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 MIR625-201ENST00000385047 85 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 MIR559-201ENST00000385188 96 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 MIR653-201ENST00000385279 96 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.91□□□□□ -2.26
RFX4Q33E94 AL603825.1-201ENST00000438481 80 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 CHEK2P4-201ENST00000450340 246 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.91□□□□□ -2.26
RFX4Q33E94 RNU7-169P-201ENST00000459456 61 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 AC087343.1-201ENST00000477341 475 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.91□□□□□ -2.26
RFX4Q33E94 TRMT112P2-201ENST00000512910 132 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 RNU6-1278P-201ENST00000516130 107 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 RNU6-1096P-201ENST00000517089 102 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 MIR2355-201ENST00000517199 87 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 RNU6-1116P-201ENST00000517269 99 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 AP002004.2-201ENST00000531656 154 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.91□□□□□ -2.26
RFX4Q33E94 MIR5690-201ENST00000583739 73 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 AL117336.2-201ENST00000602435 335 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 AL513534.2-201ENST00000603836 250 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 MIR8065-201ENST00000620577 100 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 AC091895.1-201ENST00000624494 256 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 AC138305.3-201ENST00000624988 240 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 MTND4LP32-201ENST00000636111 270 ntBASIC0.91□□□□□ -2.26
RFX4Q33E94 RNU6-199P-201ENST00000362954 107 ntBASIC0.9□□□□□ -2.27
RFX4Q33E94 RNU1-124P-201ENST00000363861 145 ntBASIC0.9□□□□□ -2.27
RFX4Q33E94 RNU4-41P-201ENST00000364426 143 ntBASIC0.9□□□□□ -2.27
RFX4Q33E94 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
RFX4Q33E94 RNU6-708P-201ENST00000384217 107 ntBASIC0.9□□□□□ -2.27
RFX4Q33E94 MIR562-201ENST00000384894 95 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms