Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 AC099799.1-201ENST00000439809 192 ntBASIC1.13□□□□□ -2.23
SF3A2Q15428 RNU7-87P-201ENST00000459343 62 ntBASIC1.13□□□□□ -2.23
SF3A2Q15428 AC007215.1-201ENST00000464893 276 ntBASIC1.13□□□□□ -2.23
SF3A2Q15428 AP000870.1-201ENST00000472927 406 ntBASIC1.13□□□□□ -2.23
SF3A2Q15428 Y_RNA.661-201ENST00000516003 99 ntBASIC1.13□□□□□ -2.23
SF3A2Q15428 RNU6-976P-201ENST00000516086 111 ntBASIC1.13□□□□□ -2.23
SF3A2Q15428 RNU6-58P-201ENST00000517143 103 ntBASIC1.13□□□□□ -2.23
SF3A2Q15428 SNORD116.3-201ENST00000517176 78 ntBASIC1.13□□□□□ -2.23
SF3A2Q15428 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SF3A2Q15428 AC019288.1-201ENST00000557918 224 ntBASIC1.13□□□□□ -2.23
SF3A2Q15428 AC044792.1-201ENST00000593294 196 ntBASIC1.13□□□□□ -2.23
SF3A2Q15428 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.13□□□□□ -2.23
SF3A2Q15428 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.13□□□□□ -2.23
SF3A2Q15428 AC087588.2-201ENST00000617667 426 ntBASIC1.13□□□□□ -2.23
SF3A2Q15428 Y_RNA.31-201ENST00000362574 102 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 Y_RNA.128-201ENST00000363391 112 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 RNU6-727P-201ENST00000363592 107 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 SNORD115-8-201ENST00000363856 82 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 RNU4-41P-201ENST00000364426 143 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 Y_RNA.252-201ENST00000364556 101 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 SNORD115-38-201ENST00000365037 82 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 Y_RNA.358-201ENST00000365491 99 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 Y_RNA.364-201ENST00000365532 101 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 RNU6-939P-201ENST00000384634 107 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 RNU6-417P-201ENST00000384712 107 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 RNU6-308P-201ENST00000390957 107 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 RNA5SP467-201ENST00000391274 118 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 AC005534.2-201ENST00000431047 433 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 AC069257.2-201ENST00000441819 155 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 AL137792.2-201ENST00000443484 235 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 AC009237.7-201ENST00000447357 229 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 RNU7-169P-201ENST00000459456 61 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 Y_RNA.631-201ENST00000459607 101 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 RNU6-1198P-201ENST00000516904 67 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 RNA5SP54-201ENST00000516951 92 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 AC090821.2-201ENST00000523552 176 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 UBL5P4-201ENST00000562584 236 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.12□□□□□ -2.23
SF3A2Q15428 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.12□□□□□ -2.23
SF3A2Q15428 AC091925.1-201ENST00000623204 462 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 AC134503.1-201ENST00000633048 54 ntBASIC1.12□□□□□ -2.23
SF3A2Q15428 SNORD33-201ENST00000362761 85 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 RNU6-137P-201ENST00000363680 108 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 RNU6-873P-201ENST00000363833 107 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 RNU6-975P-201ENST00000384296 105 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 Y_RNA.557-201ENST00000384680 107 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 MIR194-1-201ENST00000384892 85 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 MIR10B-201ENST00000385011 110 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 SNORA69.1-201ENST00000390904 137 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 RNU6-159P-201ENST00000391080 106 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 MIR548P-201ENST00000408336 84 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 RNA5SP504-201ENST00000410676 117 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 PMCHL1-202ENST00000423102 261 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 AC096644.2-201ENST00000429278 159 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 USP9YP16-201ENST00000430287 407 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 HMGN2P34-201ENST00000437647 269 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 CHEK2P4-201ENST00000450340 246 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 USP9YP23-201ENST00000455085 407 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 U8.22-201ENST00000459141 133 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 RNU7-57P-201ENST00000459540 60 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 RPL30P7-201ENST00000479312 323 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 RNU6-1114P-201ENST00000516022 107 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 RNU2-34P-201ENST00000516534 121 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 RNU7-4P-201ENST00000516961 62 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 AC144568.1-201ENST00000520139 137 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 AC020661.2-201ENST00000560114 134 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 AC026470.2-201ENST00000561492 181 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.11□□□□□ -2.23
SF3A2Q15428 MIR5695-201ENST00000579717 85 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 MIR3171-201ENST00000584270 74 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 AC092447.9-201ENST00000603395 144 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 SNRPGP20-201ENST00000604477 205 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 AC006157.1-201ENST00000611750 366 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 AC007485.1-201ENST00000616755 206 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 AC138305.3-201ENST00000624988 240 ntBASIC1.11□□□□□ -2.23
SF3A2Q15428 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SF3A2Q15428 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
SF3A2Q15428 MIR373-201ENST00000362273 69 ntBASIC1.1□□□□□ -2.23
SF3A2Q15428 RNU1-115P-201ENST00000365329 160 ntBASIC1.1□□□□□ -2.23
SF3A2Q15428 RNU6-1227P-201ENST00000383981 107 ntBASIC1.1□□□□□ -2.23
SF3A2Q15428 SNORA67.2-201ENST00000384300 149 ntBASIC1.1□□□□□ -2.23
SF3A2Q15428 MIR1302-11-201ENST00000408051 138 ntBASIC1.1□□□□□ -2.23
SF3A2Q15428 MIR1302-9-201ENST00000408365 138 ntBASIC1.1□□□□□ -2.23
SF3A2Q15428 MIR320B2-201ENST00000408479 138 ntBASIC1.1□□□□□ -2.23
SF3A2Q15428 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
SF3A2Q15428 MIR1302-10-201ENST00000408734 138 ntBASIC1.1□□□□□ -2.23
SF3A2Q15428 Y_RNA.592-201ENST00000410274 109 ntBASIC1.1□□□□□ -2.23
SF3A2Q15428 Y_RNA.605-201ENST00000410577 105 ntBASIC1.1□□□□□ -2.23
SF3A2Q15428 AC016909.1-201ENST00000415916 166 ntBASIC1.1□□□□□ -2.23
SF3A2Q15428 COX6CP10-201ENST00000416832 224 ntBASIC1.1□□□□□ -2.23
SF3A2Q15428 AC114482.1-201ENST00000418010 247 ntBASIC1.1□□□□□ -2.23
SF3A2Q15428 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.1□□□□□ -2.23
SF3A2Q15428 EIF1P2-201ENST00000428233 350 ntBASIC1.1□□□□□ -2.23
SF3A2Q15428 MTCYBP6-201ENST00000441810 138 ntBASIC1.1□□□□□ -2.23
SF3A2Q15428 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.1□□□□□ -2.23
SF3A2Q15428 SNORA25.14-201ENST00000516481 132 ntBASIC1.1□□□□□ -2.23
SF3A2Q15428 RN7SKP295-201ENST00000517264 153 ntBASIC1.1□□□□□ -2.23
SF3A2Q15428 AC022868.1-201ENST00000517767 391 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms