Protein–RNA interactions for Protein: Q13011

ECH1, Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECH1Q13011 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.72□□□□□ -2.29
ECH1Q13011 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.72□□□□□ -2.29
ECH1Q13011 MTATP6P26-201ENST00000445926 662 ntBASIC0.72□□□□□ -2.29
ECH1Q13011 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.72□□□□□ -2.29
ECH1Q13011 RPL39P39-201ENST00000455840 151 ntBASIC0.72□□□□□ -2.29
ECH1Q13011 PDCD5P2-201ENST00000507570 312 ntBASIC0.72□□□□□ -2.29
ECH1Q13011 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.72□□□□□ -2.29
ECH1Q13011 RNU6-197P-201ENST00000516680 100 ntBASIC0.72□□□□□ -2.29
ECH1Q13011 RNU6-1016P-201ENST00000516689 94 ntBASIC0.72□□□□□ -2.29
ECH1Q13011 MIR3192-201ENST00000584920 77 ntBASIC0.72□□□□□ -2.29
ECH1Q13011 AC211469.2-201ENST00000605461 205 ntBASIC0.72□□□□□ -2.29
ECH1Q13011 AL391903.3-201ENST00000612158 163 ntBASIC0.72□□□□□ -2.29
ECH1Q13011 MIR3674-201ENST00000636576 68 ntBASIC0.72□□□□□ -2.29
ECH1Q13011 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.71□□□□□ -2.3
ECH1Q13011 SNORD114-7-201ENST00000362520 77 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 RNU6-833P-201ENST00000363486 107 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 RNU6-879P-201ENST00000364328 108 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 Y_RNA.339-201ENST00000365325 102 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 Y_RNA.361-201ENST00000365515 120 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 RNU6-136P-201ENST00000384663 107 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 MIR200A-201ENST00000384875 90 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 MIR520G-201ENST00000385064 90 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 RNU6-700P-201ENST00000391043 107 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 SNORD115-47-201ENST00000391226 86 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 MTCYBP10-201ENST00000424905 650 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 LINC01399-202ENST00000458450 244 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 RNU7-87P-201ENST00000459343 62 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.71□□□□□ -2.3
ECH1Q13011 SNORA40.9-201ENST00000515895 93 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 RNU6-63P-201ENST00000516690 95 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 RNU6-1096P-201ENST00000517089 102 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.71□□□□□ -2.3
ECH1Q13011 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.71□□□□□ -2.3
ECH1Q13011 FAM106DP-201ENST00000586416 501 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 AC018638.8-201ENST00000588755 281 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 AC136443.5-201ENST00000603741 370 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 AC012557.2-201ENST00000605919 418 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 MIR6504-201ENST00000613520 61 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.71□□□□□ -2.3
ECH1Q13011 U4.5-201ENST00000617137 123 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 AL008636.1-201ENST00000625038 1018 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 MIR6866-201ENST00000638146 69 ntBASIC0.71□□□□□ -2.3
ECH1Q13011 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
ECH1Q13011 Y_RNA.2-201ENST00000362330 96 ntBASIC0.7□□□□□ -2.3
ECH1Q13011 RNU6-623P-201ENST00000363143 105 ntBASIC0.7□□□□□ -2.3
ECH1Q13011 Y_RNA.358-201ENST00000365491 99 ntBASIC0.7□□□□□ -2.3
ECH1Q13011 Y_RNA.453-201ENST00000384223 109 ntBASIC0.7□□□□□ -2.3
ECH1Q13011 MIR608-201ENST00000384820 100 ntBASIC0.7□□□□□ -2.3
ECH1Q13011 MIR100-201ENST00000385259 80 ntBASIC0.7□□□□□ -2.3
ECH1Q13011 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.7□□□□□ -2.3
ECH1Q13011 MIR1276-201ENST00000408707 83 ntBASIC0.7□□□□□ -2.3
ECH1Q13011 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.7□□□□□ -2.3
ECH1Q13011 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.7□□□□□ -2.3
ECH1Q13011 AL353997.1-201ENST00000432936 108 ntBASIC0.7□□□□□ -2.3
ECH1Q13011 AC233266.1-201ENST00000454518 96 ntBASIC0.7□□□□□ -2.3
ECH1Q13011 AC245047.8-201ENST00000456455 284 ntBASIC0.7□□□□□ -2.3
ECH1Q13011 RNU6-625P-201ENST00000459412 107 ntBASIC0.7□□□□□ -2.3
ECH1Q13011 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.7□□□□□ -2.3
ECH1Q13011 AC242852.1-201ENST00000612151 96 ntBASIC0.7□□□□□ -2.3
ECH1Q13011 AC244015.1-201ENST00000622301 99 ntBASIC0.7□□□□□ -2.3
ECH1Q13011 MIR96-201ENST00000362288 78 ntBASIC0.69□□□□□ -2.3
ECH1Q13011 Y_RNA.224-201ENST00000364308 111 ntBASIC0.69□□□□□ -2.3
ECH1Q13011 RNU6-593P-201ENST00000364716 112 ntBASIC0.69□□□□□ -2.3
ECH1Q13011 MIR499A-201ENST00000384903 122 ntBASIC0.69□□□□□ -2.3
ECH1Q13011 MIR891A-201ENST00000401237 79 ntBASIC0.69□□□□□ -2.3
ECH1Q13011 RNA5SP511-201ENST00000410487 115 ntBASIC0.69□□□□□ -2.3
ECH1Q13011 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.69□□□□□ -2.3
ECH1Q13011 UBE2V1P7-201ENST00000446395 340 ntBASIC0.69□□□□□ -2.3
ECH1Q13011 RPS4XP11-201ENST00000446897 772 ntBASIC0.69□□□□□ -2.3
ECH1Q13011 AC022868.1-201ENST00000517767 391 ntBASIC0.69□□□□□ -2.3
ECH1Q13011 MIR4452-201ENST00000583004 71 ntBASIC0.69□□□□□ -2.3
ECH1Q13011 MIR4653-201ENST00000585107 83 ntBASIC0.69□□□□□ -2.3
ECH1Q13011 AC108706.1-201ENST00000611053 297 ntBASIC0.69□□□□□ -2.3
ECH1Q13011 AC093913.1-201ENST00000614178 329 ntBASIC0.69□□□□□ -2.3
ECH1Q13011 AC106800.4-201ENST00000614905 153 ntBASIC0.69□□□□□ -2.3
ECH1Q13011 AC027279.3-201ENST00000625055 122 ntBASIC0.69□□□□□ -2.3
ECH1Q13011 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
ECH1Q13011 Y_RNA.336-201ENST00000365307 109 ntBASIC0.68□□□□□ -2.3
ECH1Q13011 SNORD114-22-201ENST00000365423 72 ntBASIC0.68□□□□□ -2.3
ECH1Q13011 Y_RNA.404-201ENST00000383978 102 ntBASIC0.68□□□□□ -2.3
ECH1Q13011 SNORD116-13-201ENST00000384408 92 ntBASIC0.68□□□□□ -2.3
ECH1Q13011 MIR548F5-201ENST00000408421 86 ntBASIC0.68□□□□□ -2.3
ECH1Q13011 RNA5SP475-201ENST00000410568 110 ntBASIC0.68□□□□□ -2.3
ECH1Q13011 AL354751.2-201ENST00000415471 210 ntBASIC0.68□□□□□ -2.3
ECH1Q13011 AC004941.2-201ENST00000427009 228 ntBASIC0.68□□□□□ -2.3
ECH1Q13011 RPS3AP52-201ENST00000435639 297 ntBASIC0.68□□□□□ -2.3
ECH1Q13011 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.68□□□□□ -2.3
ECH1Q13011 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.68□□□□□ -2.3
ECH1Q13011 SUMO1P2-201ENST00000452524 304 ntBASIC0.68□□□□□ -2.3
ECH1Q13011 RNU7-90P-201ENST00000459216 62 ntBASIC0.68□□□□□ -2.3
ECH1Q13011 AC092989.1-201ENST00000481235 277 ntBASIC0.68□□□□□ -2.3
ECH1Q13011 RNA5SP255-201ENST00000516370 107 ntBASIC0.68□□□□□ -2.3
ECH1Q13011 AC090142.3-201ENST00000519012 385 ntBASIC0.68□□□□□ -2.3
ECH1Q13011 AP003716.2-201ENST00000528260 108 ntBASIC0.68□□□□□ -2.3
ECH1Q13011 AC120024.3-201ENST00000603167 156 ntBASIC0.68□□□□□ -2.3
ECH1Q13011 AC009229.3-201ENST00000608056 282 ntBASIC0.68□□□□□ -2.3
ECH1Q13011 HSBP1P2-201ENST00000299671 229 ntBASIC0.67□□□□□ -2.3
ECH1Q13011 Y_RNA.86-201ENST00000363020 111 ntBASIC0.67□□□□□ -2.3
ECH1Q13011 Y_RNA.318-201ENST00000365131 97 ntBASIC0.67□□□□□ -2.3
ECH1Q13011 MIR605-201ENST00000385078 83 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms