Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 snoU2-30.1-201ENST00000365012 70 ntBASIC3.66□□□□□ -1.82
FOXC1Q12948 Y_RNA.332-201ENST00000365271 113 ntBASIC3.66□□□□□ -1.82
FOXC1Q12948 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
FOXC1Q12948 AC005326.1-201ENST00000429197 123 ntBASIC3.66□□□□□ -1.82
FOXC1Q12948 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.66□□□□□ -1.82
FOXC1Q12948 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.66□□□□□ -1.82
FOXC1Q12948 AL161932.1-201ENST00000437408 146 ntBASIC3.66□□□□□ -1.82
FOXC1Q12948 AC107083.1-201ENST00000439643 279 ntBASIC3.66□□□□□ -1.82
FOXC1Q12948 RPS26P2-201ENST00000440331 348 ntBASIC3.66□□□□□ -1.82
FOXC1Q12948 SCARNA3-201ENST00000517097 143 ntBASIC3.66□□□□□ -1.82
FOXC1Q12948 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.66□□□□□ -1.82
FOXC1Q12948 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.66□□□□□ -1.82
FOXC1Q12948 AF117829.1-206ENST00000621883 3802 ntBASIC3.66□□□□□ -1.82
FOXC1Q12948 AC006386.2-201ENST00000624491 75 ntBASIC3.66□□□□□ -1.82
FOXC1Q12948 AC012005.1-201ENST00000624575 75 ntBASIC3.66□□□□□ -1.82
FOXC1Q12948 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
FOXC1Q12948 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.66□□□□□ -1.82
FOXC1Q12948 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
FOXC1Q12948 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
FOXC1Q12948 Y_RNA.140-201ENST00000363474 103 ntBASIC3.65□□□□□ -1.83
FOXC1Q12948 SNORA27-201ENST00000384323 126 ntBASIC3.65□□□□□ -1.83
FOXC1Q12948 RNA5SP467-201ENST00000391274 118 ntBASIC3.65□□□□□ -1.83
FOXC1Q12948 AC123900.1-201ENST00000420390 96 ntBASIC3.65□□□□□ -1.83
FOXC1Q12948 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.65□□□□□ -1.83
FOXC1Q12948 AC244505.4-201ENST00000434905 287 ntBASIC3.65□□□□□ -1.83
FOXC1Q12948 SSXP5-201ENST00000443473 287 ntBASIC3.65□□□□□ -1.83
FOXC1Q12948 SNORD105B-201ENST00000458770 79 ntBASIC3.65□□□□□ -1.83
FOXC1Q12948 RN7SL271P-201ENST00000487601 295 ntBASIC3.65□□□□□ -1.83
FOXC1Q12948 RNU6-539P-201ENST00000516665 103 ntBASIC3.65□□□□□ -1.83
FOXC1Q12948 RNU6-86P-201ENST00000606534 107 ntBASIC3.65□□□□□ -1.83
FOXC1Q12948 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.65□□□□□ -1.83
FOXC1Q12948 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC3.65□□□□□ -1.83
FOXC1Q12948 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
FOXC1Q12948 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
FOXC1Q12948 SNORD77B-201ENST00000391112 67 ntBASIC3.64□□□□□ -1.83
FOXC1Q12948 Z98742.3-201ENST00000418637 326 ntBASIC3.64□□□□□ -1.83
FOXC1Q12948 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.64□□□□□ -1.83
FOXC1Q12948 RPS12P2-201ENST00000439728 269 ntBASIC3.64□□□□□ -1.83
FOXC1Q12948 AL109933.2-201ENST00000452651 260 ntBASIC3.64□□□□□ -1.83
FOXC1Q12948 RNU7-113P-201ENST00000459273 62 ntBASIC3.64□□□□□ -1.83
FOXC1Q12948 RNU7-96P-201ENST00000459535 64 ntBASIC3.64□□□□□ -1.83
FOXC1Q12948 UBL5P1-201ENST00000507979 193 ntBASIC3.64□□□□□ -1.83
FOXC1Q12948 SNORD45.4-201ENST00000516629 73 ntBASIC3.64□□□□□ -1.83
FOXC1Q12948 RNU6-965P-201ENST00000516721 96 ntBASIC3.64□□□□□ -1.83
FOXC1Q12948 RNU6-586P-201ENST00000517265 104 ntBASIC3.64□□□□□ -1.83
FOXC1Q12948 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.64□□□□□ -1.83
FOXC1Q12948 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.64□□□□□ -1.83
FOXC1Q12948 EIF4BP1-201ENST00000554881 351 ntBASIC3.64□□□□□ -1.83
FOXC1Q12948 LINC00901.1-201ENST00000617252 152 ntBASIC3.64□□□□□ -1.83
FOXC1Q12948 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
FOXC1Q12948 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
FOXC1Q12948 CEP170P1-201ENST00000502249 4587 ntBASIC3.63□□□□□ -1.83
FOXC1Q12948 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
FOXC1Q12948 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
FOXC1Q12948 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
FOXC1Q12948 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
FOXC1Q12948 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
FOXC1Q12948 SNORD68-201ENST00000363214 84 ntBASIC3.63□□□□□ -1.83
FOXC1Q12948 RNU1-33P-201ENST00000364249 162 ntBASIC3.63□□□□□ -1.83
FOXC1Q12948 Y_RNA.470-201ENST00000384307 117 ntBASIC3.63□□□□□ -1.83
FOXC1Q12948 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
FOXC1Q12948 COTL1P1-201ENST00000422309 375 ntBASIC3.63□□□□□ -1.83
FOXC1Q12948 AC017083.1-201ENST00000428093 483 ntBASIC3.63□□□□□ -1.83
FOXC1Q12948 HMGN2P16-201ENST00000456802 261 ntBASIC3.63□□□□□ -1.83
FOXC1Q12948 RNA5SP112-201ENST00000515937 99 ntBASIC3.63□□□□□ -1.83
FOXC1Q12948 RNA5SP164-201ENST00000516533 110 ntBASIC3.63□□□□□ -1.83
FOXC1Q12948 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.63□□□□□ -1.83
FOXC1Q12948 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.63□□□□□ -1.83
FOXC1Q12948 MIR548AE2-201ENST00000583456 67 ntBASIC3.63□□□□□ -1.83
FOXC1Q12948 MIR4765-201ENST00000585007 77 ntBASIC3.63□□□□□ -1.83
FOXC1Q12948 AC104984.5-201ENST00000586878 94 ntBASIC3.63□□□□□ -1.83
FOXC1Q12948 AL137849.1-201ENST00000604767 169 ntBASIC3.63□□□□□ -1.83
FOXC1Q12948 SEPT14P17-201ENST00000617978 177 ntBASIC3.63□□□□□ -1.83
FOXC1Q12948 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
FOXC1Q12948 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
FOXC1Q12948 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.63□□□□□ -1.83
FOXC1Q12948 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.63□□□□□ -1.83
FOXC1Q12948 AL442644.1-201ENST00000454390 3105 ntBASIC3.62□□□□□ -1.83
FOXC1Q12948 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
FOXC1Q12948 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
FOXC1Q12948 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
FOXC1Q12948 RNU6-1084P-201ENST00000362498 107 ntBASIC3.62□□□□□ -1.83
FOXC1Q12948 RNU6-301P-201ENST00000384277 107 ntBASIC3.62□□□□□ -1.83
FOXC1Q12948 Y_RNA.494-201ENST00000384432 111 ntBASIC3.62□□□□□ -1.83
FOXC1Q12948 MIR519C-201ENST00000385053 87 ntBASIC3.62□□□□□ -1.83
FOXC1Q12948 RNU6-613P-201ENST00000410412 108 ntBASIC3.62□□□□□ -1.83
FOXC1Q12948 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXC1Q12948 ZNF861P-201ENST00000588126 639 ntBASIC3.62□□□□□ -1.83
FOXC1Q12948 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.62□□□□□ -1.83
FOXC1Q12948 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
FOXC1Q12948 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
FOXC1Q12948 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
FOXC1Q12948 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
FOXC1Q12948 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
FOXC1Q12948 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.62□□□□□ -1.83
FOXC1Q12948 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
FOXC1Q12948 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.61□□□□□ -1.83
FOXC1Q12948 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
FOXC1Q12948 SNORA80E-201ENST00000384744 137 ntBASIC3.61□□□□□ -1.83
FOXC1Q12948 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms