Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 SNORD116-29-201ENST00000384516 83 ntBASIC1.33□□□□□ -2.2
GABPAQ06546 AC018865.2-201ENST00000423631 129 ntBASIC1.33□□□□□ -2.2
GABPAQ06546 AC096644.2-201ENST00000429278 159 ntBASIC1.33□□□□□ -2.2
GABPAQ06546 AC027119.1-201ENST00000440877 241 ntBASIC1.33□□□□□ -2.2
GABPAQ06546 AC245517.4-201ENST00000448601 281 ntBASIC1.33□□□□□ -2.2
GABPAQ06546 ELOCP24-201ENST00000456370 334 ntBASIC1.33□□□□□ -2.2
GABPAQ06546 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.33□□□□□ -2.2
GABPAQ06546 RNU6-875P-201ENST00000516488 106 ntBASIC1.33□□□□□ -2.2
GABPAQ06546 Y_RNA.718-201ENST00000517110 102 ntBASIC1.33□□□□□ -2.2
GABPAQ06546 RNU6-902P-201ENST00000517212 91 ntBASIC1.33□□□□□ -2.2
GABPAQ06546 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.33□□□□□ -2.2
GABPAQ06546 AL355375.2-201ENST00000574825 175 ntBASIC1.33□□□□□ -2.2
GABPAQ06546 MIR4801-201ENST00000582704 82 ntBASIC1.33□□□□□ -2.2
GABPAQ06546 PRR13P7-201ENST00000605538 430 ntBASIC1.33□□□□□ -2.2
GABPAQ06546 AC040896.1-201ENST00000613819 479 ntBASIC1.33□□□□□ -2.2
GABPAQ06546 AC004467.1-201ENST00000615678 330 ntBASIC1.33□□□□□ -2.2
GABPAQ06546 AL121890.5-201ENST00000620848 304 ntBASIC1.33□□□□□ -2.2
GABPAQ06546 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
GABPAQ06546 MIR410-201ENST00000362222 80 ntBASIC1.32□□□□□ -2.2
GABPAQ06546 Y_RNA.267-201ENST00000364679 109 ntBASIC1.32□□□□□ -2.2
GABPAQ06546 SNORD114-22-201ENST00000365423 72 ntBASIC1.32□□□□□ -2.2
GABPAQ06546 RNY4P36-201ENST00000391116 96 ntBASIC1.32□□□□□ -2.2
GABPAQ06546 RNU11-5P-201ENST00000391216 129 ntBASIC1.32□□□□□ -2.2
GABPAQ06546 AL034345.1-201ENST00000407768 123 ntBASIC1.32□□□□□ -2.2
GABPAQ06546 AC015922.2-201ENST00000435593 184 ntBASIC1.32□□□□□ -2.2
GABPAQ06546 RNU6-699P-201ENST00000517081 110 ntBASIC1.32□□□□□ -2.2
GABPAQ06546 AC023442.1-201ENST00000531247 422 ntBASIC1.32□□□□□ -2.2
GABPAQ06546 AC127459.3-201ENST00000624328 466 ntBASIC1.32□□□□□ -2.2
GABPAQ06546 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
GABPAQ06546 RNU6-1123P-201ENST00000362347 106 ntBASIC1.31□□□□□ -2.2
GABPAQ06546 RNU6-961P-201ENST00000363893 105 ntBASIC1.31□□□□□ -2.2
GABPAQ06546 RNU6-136P-201ENST00000384663 107 ntBASIC1.31□□□□□ -2.2
GABPAQ06546 RNU6-376P-201ENST00000384731 106 ntBASIC1.31□□□□□ -2.2
GABPAQ06546 MIR628-201ENST00000385229 95 ntBASIC1.31□□□□□ -2.2
GABPAQ06546 RNU6-1009P-201ENST00000390996 107 ntBASIC1.31□□□□□ -2.2
GABPAQ06546 MTCO2P27-201ENST00000420740 428 ntBASIC1.31□□□□□ -2.2
GABPAQ06546 SNX2P2-201ENST00000424553 323 ntBASIC1.31□□□□□ -2.2
GABPAQ06546 SDAD1P3-201ENST00000427380 333 ntBASIC1.31□□□□□ -2.2
GABPAQ06546 AC099799.1-201ENST00000439809 192 ntBASIC1.31□□□□□ -2.2
GABPAQ06546 RNU6-507P-201ENST00000516045 100 ntBASIC1.31□□□□□ -2.2
GABPAQ06546 MIR548S-201ENST00000581352 82 ntBASIC1.31□□□□□ -2.2
GABPAQ06546 AL390123.1-201ENST00000603216 237 ntBASIC1.31□□□□□ -2.2
GABPAQ06546 AL365434.2-201ENST00000607979 234 ntBASIC1.31□□□□□ -2.2
GABPAQ06546 U2.1-201ENST00000618978 145 ntBASIC1.31□□□□□ -2.2
GABPAQ06546 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.31□□□□□ -2.2
GABPAQ06546 RNU6-1065P-201ENST00000384513 106 ntBASIC1.3□□□□□ -2.2
GABPAQ06546 Y_RNA.529-201ENST00000384586 119 ntBASIC1.3□□□□□ -2.2
GABPAQ06546 MIR559-201ENST00000385188 96 ntBASIC1.3□□□□□ -2.2
GABPAQ06546 MIR873-201ENST00000401120 77 ntBASIC1.3□□□□□ -2.2
GABPAQ06546 AL591704.2-201ENST00000421658 181 ntBASIC1.3□□□□□ -2.2
GABPAQ06546 RPS27P16-201ENST00000425758 201 ntBASIC1.3□□□□□ -2.2
GABPAQ06546 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.3□□□□□ -2.2
GABPAQ06546 STAG3L5P-204ENST00000443759 179 ntBASIC1.3□□□□□ -2.2
GABPAQ06546 FCF1P4-201ENST00000448326 183 ntBASIC1.3□□□□□ -2.2
GABPAQ06546 MTND5P20-201ENST00000448677 143 ntBASIC1.3□□□□□ -2.2
GABPAQ06546 Y_RNA.632-201ENST00000459189 102 ntBASIC1.3□□□□□ -2.2
GABPAQ06546 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.3□□□□□ -2.2
GABPAQ06546 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.3□□□□□ -2.2
GABPAQ06546 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.3□□□□□ -2.2
GABPAQ06546 AL162424.1-201ENST00000602325 221 ntBASIC1.3□□□□□ -2.2
GABPAQ06546 AL078604.3-201ENST00000615580 211 ntBASIC1.3□□□□□ -2.2
GABPAQ06546 Y_RNA.124-201ENST00000363339 93 ntBASIC1.29□□□□□ -2.2
GABPAQ06546 Y_RNA.191-201ENST00000363972 113 ntBASIC1.29□□□□□ -2.2
GABPAQ06546 Y_RNA.265-201ENST00000364677 108 ntBASIC1.29□□□□□ -2.2
GABPAQ06546 MIR150-201ENST00000385048 84 ntBASIC1.29□□□□□ -2.2
GABPAQ06546 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.29□□□□□ -2.2
GABPAQ06546 AL137792.2-201ENST00000443484 235 ntBASIC1.29□□□□□ -2.2
GABPAQ06546 PGBD4P5-201ENST00000445958 426 ntBASIC1.29□□□□□ -2.2
GABPAQ06546 AC233266.1-201ENST00000454518 96 ntBASIC1.29□□□□□ -2.2
GABPAQ06546 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.29□□□□□ -2.2
GABPAQ06546 AC091021.1-201ENST00000468051 388 ntBASIC1.29□□□□□ -2.2
GABPAQ06546 RNU6-1278P-201ENST00000516130 107 ntBASIC1.29□□□□□ -2.2
GABPAQ06546 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.29□□□□□ -2.2
GABPAQ06546 MIR4452-201ENST00000583004 71 ntBASIC1.29□□□□□ -2.2
GABPAQ06546 MIR4295-201ENST00000585286 85 ntBASIC1.29□□□□□ -2.2
GABPAQ06546 SNORA28-201ENST00000606769 126 ntBASIC1.29□□□□□ -2.2
GABPAQ06546 AC242852.1-201ENST00000612151 96 ntBASIC1.29□□□□□ -2.2
GABPAQ06546 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.29□□□□□ -2.2
GABPAQ06546 AC244015.1-201ENST00000622301 99 ntBASIC1.29□□□□□ -2.2
GABPAQ06546 SNORD3E-202ENST00000627253 216 ntBASIC1.29□□□□□ -2.2
GABPAQ06546 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
GABPAQ06546 Y_RNA.116-201ENST00000363292 103 ntBASIC1.28□□□□□ -2.2
GABPAQ06546 SNORD114-27-201ENST00000363766 70 ntBASIC1.28□□□□□ -2.2
GABPAQ06546 Y_RNA.187-201ENST00000363918 113 ntBASIC1.28□□□□□ -2.2
GABPAQ06546 Y_RNA.243-201ENST00000364481 109 ntBASIC1.28□□□□□ -2.2
GABPAQ06546 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.28□□□□□ -2.2
GABPAQ06546 RNU6-1040P-201ENST00000383974 107 ntBASIC1.28□□□□□ -2.2
GABPAQ06546 RNU6-708P-201ENST00000384217 107 ntBASIC1.28□□□□□ -2.2
GABPAQ06546 RNY3P4-201ENST00000384428 101 ntBASIC1.28□□□□□ -2.2
GABPAQ06546 FGF7P4-201ENST00000509595 295 ntBASIC1.28□□□□□ -2.2
GABPAQ06546 RNU2-56P-201ENST00000516826 190 ntBASIC1.28□□□□□ -2.2
GABPAQ06546 Y_RNA.702-201ENST00000516843 96 ntBASIC1.28□□□□□ -2.2
GABPAQ06546 SNORD116.3-201ENST00000517176 78 ntBASIC1.28□□□□□ -2.2
GABPAQ06546 AC055872.1-201ENST00000570978 278 ntBASIC1.28□□□□□ -2.2
GABPAQ06546 MIR4659A-201ENST00000580269 81 ntBASIC1.28□□□□□ -2.2
GABPAQ06546 AC006380.1-201ENST00000603598 186 ntBASIC1.28□□□□□ -2.2
GABPAQ06546 AC011476.5-201ENST00000615594 130 ntBASIC1.28□□□□□ -2.2
GABPAQ06546 AC073349.3-201ENST00000617616 186 ntBASIC1.28□□□□□ -2.2
GABPAQ06546 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.28□□□□□ -2.2
GABPAQ06546 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms