Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AL391903.3-201ENST00000612158 163 ntBASIC2.62□□□□□ -1.99
IRF9Q00978 MIR7106-201ENST00000612419 65 ntBASIC2.62□□□□□ -1.99
IRF9Q00978 AL359075.3-201ENST00000613288 217 ntBASIC2.62□□□□□ -1.99
IRF9Q00978 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.62□□□□□ -1.99
IRF9Q00978 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.61□□□□□ -1.99
IRF9Q00978 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
IRF9Q00978 Y_RNA.23-201ENST00000362496 106 ntBASIC2.61□□□□□ -1.99
IRF9Q00978 SNORD115-3-201ENST00000363100 82 ntBASIC2.61□□□□□ -1.99
IRF9Q00978 RNU6-674P-201ENST00000363831 107 ntBASIC2.61□□□□□ -1.99
IRF9Q00978 Y_RNA.229-201ENST00000364347 113 ntBASIC2.61□□□□□ -1.99
IRF9Q00978 RNU6-312P-201ENST00000364629 107 ntBASIC2.61□□□□□ -1.99
IRF9Q00978 RNU6-275P-201ENST00000364910 107 ntBASIC2.61□□□□□ -1.99
IRF9Q00978 MIR29C-201ENST00000385231 88 ntBASIC2.61□□□□□ -1.99
IRF9Q00978 AL117342.1-201ENST00000404861 406 ntBASIC2.61□□□□□ -1.99
IRF9Q00978 RNA5SP21-201ENST00000410917 96 ntBASIC2.61□□□□□ -1.99
IRF9Q00978 RNU5E-9P-201ENST00000411164 104 ntBASIC2.61□□□□□ -1.99
IRF9Q00978 AC087499.2-201ENST00000432861 149 ntBASIC2.61□□□□□ -1.99
IRF9Q00978 MTND2P29-201ENST00000438595 412 ntBASIC2.61□□□□□ -1.99
IRF9Q00978 AL109933.2-201ENST00000452651 260 ntBASIC2.61□□□□□ -1.99
IRF9Q00978 AC245047.8-201ENST00000456455 284 ntBASIC2.61□□□□□ -1.99
IRF9Q00978 AC091021.1-201ENST00000468051 388 ntBASIC2.61□□□□□ -1.99
IRF9Q00978 RNU6-1007P-201ENST00000516586 107 ntBASIC2.61□□□□□ -1.99
IRF9Q00978 MIR3169-201ENST00000578032 83 ntBASIC2.61□□□□□ -1.99
IRF9Q00978 MIR4658-201ENST00000584344 65 ntBASIC2.61□□□□□ -1.99
IRF9Q00978 AC108706.1-201ENST00000611053 297 ntBASIC2.61□□□□□ -1.99
IRF9Q00978 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.61□□□□□ -1.99
IRF9Q00978 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
IRF9Q00978 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
IRF9Q00978 SNORA80A-201ENST00000363922 136 ntBASIC2.6□□□□□ -1.99
IRF9Q00978 Y_RNA.441-201ENST00000384123 112 ntBASIC2.6□□□□□ -1.99
IRF9Q00978 MIR515-2-201ENST00000384883 83 ntBASIC2.6□□□□□ -1.99
IRF9Q00978 MIR515-1-201ENST00000384884 83 ntBASIC2.6□□□□□ -1.99
IRF9Q00978 MIR520G-201ENST00000385064 90 ntBASIC2.6□□□□□ -1.99
IRF9Q00978 RNU6-578P-201ENST00000390980 103 ntBASIC2.6□□□□□ -1.99
IRF9Q00978 RNU11-5P-201ENST00000391216 129 ntBASIC2.6□□□□□ -1.99
IRF9Q00978 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.6□□□□□ -1.99
IRF9Q00978 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.6□□□□□ -1.99
IRF9Q00978 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.6□□□□□ -1.99
IRF9Q00978 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.6□□□□□ -1.99
IRF9Q00978 SCARNA8-201ENST00000515924 131 ntBASIC2.6□□□□□ -1.99
IRF9Q00978 RNU6-453P-201ENST00000516819 85 ntBASIC2.6□□□□□ -1.99
IRF9Q00978 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.6□□□□□ -1.99
IRF9Q00978 AL031274.2-201ENST00000599419 203 ntBASIC2.6□□□□□ -1.99
IRF9Q00978 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
IRF9Q00978 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.59□□□□□ -1.99
IRF9Q00978 SNORA33-201ENST00000363664 130 ntBASIC2.59□□□□□ -1.99
IRF9Q00978 SNORA25.6-201ENST00000364121 118 ntBASIC2.59□□□□□ -1.99
IRF9Q00978 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.59□□□□□ -1.99
IRF9Q00978 CST2P1-201ENST00000425770 87 ntBASIC2.59□□□□□ -1.99
IRF9Q00978 AC018634.1-201ENST00000437554 401 ntBASIC2.59□□□□□ -1.99
IRF9Q00978 AC107083.1-201ENST00000439643 279 ntBASIC2.59□□□□□ -1.99
IRF9Q00978 RNU1-142P-201ENST00000516682 145 ntBASIC2.59□□□□□ -1.99
IRF9Q00978 RNU6-1096P-201ENST00000517089 102 ntBASIC2.59□□□□□ -1.99
IRF9Q00978 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.59□□□□□ -1.99
IRF9Q00978 AC011604.1-201ENST00000545978 196 ntBASIC2.59□□□□□ -1.99
IRF9Q00978 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.59□□□□□ -1.99
IRF9Q00978 AL929325.1-201ENST00000603096 117 ntBASIC2.59□□□□□ -1.99
IRF9Q00978 AC104465.1-201ENST00000611365 139 ntBASIC2.59□□□□□ -1.99
IRF9Q00978 AC021753.1-201ENST00000635724 168 ntBASIC2.59□□□□□ -1.99
IRF9Q00978 U6.108-201ENST00000637764 58 ntBASIC2.59□□□□□ -1.99
IRF9Q00978 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
IRF9Q00978 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
IRF9Q00978 SNORA5B-201ENST00000363786 132 ntBASIC2.58□□□□□ -2
IRF9Q00978 RNA5SP323-201ENST00000391094 133 ntBASIC2.58□□□□□ -2
IRF9Q00978 RNU6-394P-201ENST00000410735 107 ntBASIC2.58□□□□□ -2
IRF9Q00978 RNU6-1135P-201ENST00000411083 103 ntBASIC2.58□□□□□ -2
IRF9Q00978 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.58□□□□□ -2
IRF9Q00978 RNA5SP137-201ENST00000516833 135 ntBASIC2.58□□□□□ -2
IRF9Q00978 AL033523.1-201ENST00000605153 153 ntBASIC2.58□□□□□ -2
IRF9Q00978 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.58□□□□□ -2
IRF9Q00978 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
IRF9Q00978 AC100821.1-201ENST00000523153 2479 ntBASIC2.58□□□□□ -2
IRF9Q00978 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.57□□□□□ -2
IRF9Q00978 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.57□□□□□ -2
IRF9Q00978 RNU1-58P-201ENST00000362413 163 ntBASIC2.57□□□□□ -2
IRF9Q00978 RNU6-862P-201ENST00000362804 105 ntBASIC2.57□□□□□ -2
IRF9Q00978 RNU4-41P-201ENST00000364426 143 ntBASIC2.57□□□□□ -2
IRF9Q00978 RNU6-746P-201ENST00000384112 109 ntBASIC2.57□□□□□ -2
IRF9Q00978 RNU6-804P-201ENST00000384286 107 ntBASIC2.57□□□□□ -2
IRF9Q00978 MT-TT-201ENST00000387460 66 ntBASIC2.57□□□□□ -2
IRF9Q00978 RNU6-1228P-201ENST00000391014 107 ntBASIC2.57□□□□□ -2
IRF9Q00978 SEPT7P4-201ENST00000437076 306 ntBASIC2.57□□□□□ -2
IRF9Q00978 AC005840.1-201ENST00000498412 377 ntBASIC2.57□□□□□ -2
IRF9Q00978 AC024995.1-201ENST00000523014 93 ntBASIC2.57□□□□□ -2
IRF9Q00978 AC109810.1-201ENST00000534066 224 ntBASIC2.57□□□□□ -2
IRF9Q00978 AC004486.1-201ENST00000546846 233 ntBASIC2.57□□□□□ -2
IRF9Q00978 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.57□□□□□ -2
IRF9Q00978 MIR3144-201ENST00000579460 79 ntBASIC2.57□□□□□ -2
IRF9Q00978 MIR6852-201ENST00000621699 66 ntBASIC2.57□□□□□ -2
IRF9Q00978 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.57□□□□□ -2
IRF9Q00978 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.56□□□□□ -2
IRF9Q00978 RNU6-774P-201ENST00000363238 107 ntBASIC2.56□□□□□ -2
IRF9Q00978 Y_RNA.170-201ENST00000363746 110 ntBASIC2.56□□□□□ -2
IRF9Q00978 Y_RNA.203-201ENST00000364106 102 ntBASIC2.56□□□□□ -2
IRF9Q00978 Y_RNA.272-201ENST00000364696 102 ntBASIC2.56□□□□□ -2
IRF9Q00978 DEFA7P-201ENST00000382676 285 ntBASIC2.56□□□□□ -2
IRF9Q00978 SNORA8-201ENST00000384574 139 ntBASIC2.56□□□□□ -2
IRF9Q00978 RNA5SP496-201ENST00000391240 109 ntBASIC2.56□□□□□ -2
IRF9Q00978 AL512604.1-201ENST00000404812 257 ntBASIC2.56□□□□□ -2
IRF9Q00978 AL606845.1-201ENST00000404881 255 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms