Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 AC244669.1-204ENST00000621564 178 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.38□□□□□ -2.47
HSPG2P98160 SCARNA4-201ENST00000629045 128 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 AL445523.1-201ENST00000451184 1362 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 RNU6-490P-201ENST00000362985 107 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 RNU6-353P-201ENST00000364266 108 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 RNU6-796P-201ENST00000391086 107 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 AL663109.1-201ENST00000411498 844 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 MTCO1P17-201ENST00000411522 491 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 SSR1P2-201ENST00000415208 787 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 XACT-201ENST00000468762 497 ntTSL 5 BASIC-0.38□□□□□ -2.47
HSPG2P98160 AC117522.1-201ENST00000509821 380 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.38□□□□□ -2.47
HSPG2P98160 AC022306.2-201ENST00000617563 647 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 SNORD115-48-201ENST00000364764 76 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 U6.112-201ENST00000384129 70 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 ELOCP17-201ENST00000414751 326 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 RNU7-140P-201ENST00000459546 60 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 EIF1AXP2-201ENST00000555940 413 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 AC087683.1-201ENST00000591187 441 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 U8.6-201ENST00000364939 135 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 MIR1185-2-201ENST00000408687 86 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 RNU2-54P-201ENST00000410299 190 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 AL158050.1-201ENST00000416077 457 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 MTND4P18-201ENST00000447010 465 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 ZNF114P1-201ENST00000453500 292 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 AC011352.1-201ENST00000512300 793 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 RNU6-469P-201ENST00000516253 101 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.38□□□□□ -2.47
HSPG2P98160 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.38□□□□□ -2.47
HSPG2P98160 AC012414.2-201ENST00000559474 187 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 MIR544B-201ENST00000582372 78 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 MIR4306-201ENST00000583390 91 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 AC121247.2-201ENST00000604776 136 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 AC078880.5-201ENST00000617845 421 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 AC005562.2-201ENST00000618264 111 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 MIR6740-201ENST00000618268 113 ntBASIC-0.38□□□□□ -2.47
HSPG2P98160 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 RNU6-371P-201ENST00000364283 108 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 RNU6-116P-201ENST00000384042 109 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.39□□□□□ -2.47
HSPG2P98160 ZNF736P7Y-201ENST00000425158 820 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 MTND2P20-201ENST00000440805 661 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 RNU6-274P-201ENST00000459566 107 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 RPL39P34-201ENST00000477141 156 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 RNU7-172P-201ENST00000517125 64 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 AC090572.1-201ENST00000519251 160 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.39□□□□□ -2.47
HSPG2P98160 MIR4264-201ENST00000583520 66 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 AL157770.1-201ENST00000623049 439 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 ZNF299P-201ENST00000406845 1804 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 RNU6-946P-201ENST00000383878 107 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 MTCO3P19-201ENST00000415864 321 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 BX276092.1-201ENST00000427368 251 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 AC072039.2-201ENST00000608883 439 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 RNU6-245P-201ENST00000384020 107 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 RNU6-535P-201ENST00000384722 107 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 AC004866.1-201ENST00000411748 78 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 AC074085.1-201ENST00000413598 418 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 UQCRBP2-201ENST00000447827 297 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 RNA5SP470-201ENST00000516463 106 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 AC131281.1-201ENST00000522984 164 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 AC138749.4-201ENST00000563970 127 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 AC124016.2-201ENST00000610058 665 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 AL590491.3-201ENST00000610731 82 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 AC103705.1-201ENST00000619013 241 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 AC091912.2-201ENST00000624798 167 ntBASIC-0.39□□□□□ -2.47
HSPG2P98160 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 RNU6-187P-201ENST00000384139 106 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.4□□□□□ -2.47
HSPG2P98160 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.4□□□□□ -2.47
HSPG2P98160 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.4□□□□□ -2.47
HSPG2P98160 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 AC073539.2-201ENST00000597113 165 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 AP001836.1-201ENST00000604675 523 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.4□□□□□ -2.47
HSPG2P98160 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 AC022306.3-201ENST00000619930 550 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.4□□□□□ -2.47
HSPG2P98160 AC244250.2-201ENST00000418731 148 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms