Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
IRX3P78415 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.89□□□□□ -2.27
IRX3P78415 Y_RNA.265-201ENST00000364677 108 ntBASIC0.88□□□□□ -2.27
IRX3P78415 RNU6-306P-201ENST00000384617 107 ntBASIC0.88□□□□□ -2.27
IRX3P78415 MIR19B1-201ENST00000384829 87 ntBASIC0.88□□□□□ -2.27
IRX3P78415 MIR329-1-201ENST00000385028 80 ntBASIC0.88□□□□□ -2.27
IRX3P78415 AL451046.2-201ENST00000403074 277 ntBASIC0.88□□□□□ -2.27
IRX3P78415 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.88□□□□□ -2.27
IRX3P78415 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.88□□□□□ -2.27
IRX3P78415 PSMC1P5-201ENST00000512850 177 ntBASIC0.88□□□□□ -2.27
IRX3P78415 RNU6-351P-201ENST00000516097 100 ntBASIC0.88□□□□□ -2.27
IRX3P78415 RNU6-1016P-201ENST00000516689 94 ntBASIC0.88□□□□□ -2.27
IRX3P78415 RNU2-56P-201ENST00000516826 190 ntBASIC0.88□□□□□ -2.27
IRX3P78415 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.88□□□□□ -2.27
IRX3P78415 MIR6513-201ENST00000621188 64 ntBASIC0.88□□□□□ -2.27
IRX3P78415 MTND5P16-201ENST00000460269 1703 ntBASIC0.87□□□□□ -2.27
IRX3P78415 Y_RNA.6-201ENST00000362350 114 ntBASIC0.87□□□□□ -2.27
IRX3P78415 RNU4-75P-201ENST00000364621 146 ntBASIC0.87□□□□□ -2.27
IRX3P78415 SNORA20B-201ENST00000384220 132 ntBASIC0.87□□□□□ -2.27
IRX3P78415 RNU6-842P-201ENST00000384269 107 ntBASIC0.87□□□□□ -2.27
IRX3P78415 RNU6-424P-201ENST00000384367 105 ntBASIC0.87□□□□□ -2.27
IRX3P78415 RNU6-505P-201ENST00000384427 107 ntBASIC0.87□□□□□ -2.27
IRX3P78415 Y_RNA.554-201ENST00000384672 102 ntBASIC0.87□□□□□ -2.27
IRX3P78415 RPL39P39-201ENST00000455840 151 ntBASIC0.87□□□□□ -2.27
IRX3P78415 RNU6-329P-201ENST00000459618 107 ntBASIC0.87□□□□□ -2.27
IRX3P78415 MTND5P5-201ENST00000503764 376 ntBASIC0.87□□□□□ -2.27
IRX3P78415 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.87□□□□□ -2.27
IRX3P78415 AC136628.3-201ENST00000521868 290 ntBASIC0.87□□□□□ -2.27
IRX3P78415 AC090517.2-201ENST00000614966 680 ntBASIC0.87□□□□□ -2.27
IRX3P78415 AC073544.1-201ENST00000600110 1595 ntBASIC0.87□□□□□ -2.27
IRX3P78415 SNORA27.1-201ENST00000362604 124 ntBASIC0.86□□□□□ -2.27
IRX3P78415 Y_RNA.482-201ENST00000384377 111 ntBASIC0.86□□□□□ -2.27
IRX3P78415 Y_RNA.498-201ENST00000384460 102 ntBASIC0.86□□□□□ -2.27
IRX3P78415 MIR1277-201ENST00000408536 78 ntBASIC0.86□□□□□ -2.27
IRX3P78415 RNA5SP475-201ENST00000410568 110 ntBASIC0.86□□□□□ -2.27
IRX3P78415 STAG3L5P-204ENST00000443759 179 ntBASIC0.86□□□□□ -2.27
IRX3P78415 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.86□□□□□ -2.27
IRX3P78415 AC105758.1-201ENST00000506038 399 ntBASIC0.86□□□□□ -2.27
IRX3P78415 RNA5SP20-201ENST00000515976 84 ntBASIC0.86□□□□□ -2.27
IRX3P78415 RNU6-165P-201ENST00000517170 99 ntBASIC0.86□□□□□ -2.27
IRX3P78415 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.86□□□□□ -2.27
IRX3P78415 AC023157.2-201ENST00000540596 141 ntBASIC0.86□□□□□ -2.27
IRX3P78415 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.86□□□□□ -2.27
IRX3P78415 AC091178.2-201ENST00000584401 117 ntBASIC0.86□□□□□ -2.27
IRX3P78415 AC068647.2-201ENST00000637380 353 ntBASIC0.86□□□□□ -2.27
IRX3P78415 AL442644.1-201ENST00000454390 3105 ntBASIC0.86□□□□□ -2.27
IRX3P78415 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
IRX3P78415 Y_RNA.3-201ENST00000362331 103 ntBASIC0.85□□□□□ -2.27
IRX3P78415 SNORD116-4-201ENST00000384733 96 ntBASIC0.85□□□□□ -2.27
IRX3P78415 MIR873-201ENST00000401120 77 ntBASIC0.85□□□□□ -2.27
IRX3P78415 ELOCP21-201ENST00000412558 336 ntBASIC0.85□□□□□ -2.27
IRX3P78415 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.85□□□□□ -2.27
IRX3P78415 AC116353.2-201ENST00000505332 712 ntBASIC0.85□□□□□ -2.27
IRX3P78415 AC022493.2-201ENST00000506122 481 ntBASIC0.85□□□□□ -2.27
IRX3P78415 RNU4-49P-201ENST00000516080 140 ntBASIC0.85□□□□□ -2.27
IRX3P78415 RNA5SP168-201ENST00000516642 112 ntBASIC0.85□□□□□ -2.27
IRX3P78415 Y_RNA.708-201ENST00000516950 96 ntBASIC0.85□□□□□ -2.27
IRX3P78415 AF235103.2-201ENST00000525753 346 ntBASIC0.85□□□□□ -2.27
IRX3P78415 AL590095.2-201ENST00000604136 117 ntBASIC0.85□□□□□ -2.27
IRX3P78415 AC005828.6-201ENST00000606610 232 ntBASIC0.85□□□□□ -2.27
IRX3P78415 AC002553.4-201ENST00000616896 331 ntBASIC0.85□□□□□ -2.27
IRX3P78415 RNU4-79P-201ENST00000362764 141 ntBASIC0.84□□□□□ -2.27
IRX3P78415 Y_RNA.72-201ENST00000362894 103 ntBASIC0.84□□□□□ -2.27
IRX3P78415 RNY1P16-201ENST00000363063 111 ntBASIC0.84□□□□□ -2.27
IRX3P78415 RNU4-41P-201ENST00000364426 143 ntBASIC0.84□□□□□ -2.27
IRX3P78415 RNU6-376P-201ENST00000384731 106 ntBASIC0.84□□□□□ -2.27
IRX3P78415 MIR200A-201ENST00000384875 90 ntBASIC0.84□□□□□ -2.27
IRX3P78415 MIR548K-201ENST00000408406 116 ntBASIC0.84□□□□□ -2.27
IRX3P78415 MTND3P8-201ENST00000412909 339 ntBASIC0.84□□□□□ -2.27
IRX3P78415 AC016907.1-201ENST00000419483 435 ntBASIC0.84□□□□□ -2.27
IRX3P78415 AL137792.2-201ENST00000443484 235 ntBASIC0.84□□□□□ -2.27
IRX3P78415 HSPE1P13-201ENST00000451143 297 ntBASIC0.84□□□□□ -2.27
IRX3P78415 AC107399.1-201ENST00000451226 265 ntBASIC0.84□□□□□ -2.27
IRX3P78415 U8.19-201ENST00000459095 133 ntBASIC0.84□□□□□ -2.27
IRX3P78415 U8.22-201ENST00000459141 133 ntBASIC0.84□□□□□ -2.27
IRX3P78415 OR9P1P-201ENST00000496431 281 ntBASIC0.84□□□□□ -2.27
IRX3P78415 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.84□□□□□ -2.27
IRX3P78415 AC026782.1-201ENST00000512952 449 ntBASIC0.84□□□□□ -2.27
IRX3P78415 RNU6-273P-201ENST00000516937 96 ntBASIC0.84□□□□□ -2.27
IRX3P78415 AC018448.1-201ENST00000552843 316 ntBASIC0.84□□□□□ -2.27
IRX3P78415 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
IRX3P78415 AC106800.4-201ENST00000614905 153 ntBASIC0.84□□□□□ -2.27
IRX3P78415 AC127459.3-201ENST00000624328 466 ntBASIC0.84□□□□□ -2.27
IRX3P78415 SNORA80D-201ENST00000384488 135 ntBASIC0.83□□□□□ -2.28
IRX3P78415 SNORA12.1-201ENST00000390873 148 ntBASIC0.83□□□□□ -2.28
IRX3P78415 AL355796.1-201ENST00000406706 323 ntBASIC0.83□□□□□ -2.28
IRX3P78415 RNU6-1050P-201ENST00000410388 107 ntBASIC0.83□□□□□ -2.28
IRX3P78415 RNU6-1148P-201ENST00000410992 104 ntBASIC0.83□□□□□ -2.28
IRX3P78415 RNU6-1001P-201ENST00000411265 100 ntBASIC0.83□□□□□ -2.28
IRX3P78415 AC018865.2-201ENST00000423631 129 ntBASIC0.83□□□□□ -2.28
IRX3P78415 AC245047.7-201ENST00000440265 293 ntBASIC0.83□□□□□ -2.28
IRX3P78415 SNORA70.12-201ENST00000516084 153 ntBASIC0.83□□□□□ -2.28
IRX3P78415 Y_RNA.682-201ENST00000516457 100 ntBASIC0.83□□□□□ -2.28
IRX3P78415 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.83□□□□□ -2.28
IRX3P78415 AC125232.2-201ENST00000592457 143 ntBASIC0.83□□□□□ -2.28
IRX3P78415 AC007742.2-201ENST00000618226 398 ntBASIC0.83□□□□□ -2.28
IRX3P78415 AC027279.3-201ENST00000625055 122 ntBASIC0.83□□□□□ -2.28
IRX3P78415 MIR3674-201ENST00000636576 68 ntBASIC0.83□□□□□ -2.28
IRX3P78415 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
IRX3P78415 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms