Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 RNA5SP20-201ENST00000515976 84 ntBASIC2.81□□□□□ -1.96
HERVK_113P62684 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.81□□□□□ -1.96
HERVK_113P62684 MIR1273D-201ENST00000577266 86 ntBASIC2.81□□□□□ -1.96
HERVK_113P62684 MIR3616-201ENST00000584070 92 ntBASIC2.81□□□□□ -1.96
HERVK_113P62684 AL356280.1-201ENST00000603614 379 ntBASIC2.81□□□□□ -1.96
HERVK_113P62684 AC004832.4-201ENST00000608952 331 ntBASIC2.81□□□□□ -1.96
HERVK_113P62684 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.81□□□□□ -1.96
HERVK_113P62684 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.81□□□□□ -1.96
HERVK_113P62684 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HERVK_113P62684 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HERVK_113P62684 Y_RNA.506-201ENST00000384494 102 ntBASIC2.8□□□□□ -1.96
HERVK_113P62684 Y_RNA.572-201ENST00000384757 98 ntBASIC2.8□□□□□ -1.96
HERVK_113P62684 AC010531.2-201ENST00000465012 153 ntBASIC2.8□□□□□ -1.96
HERVK_113P62684 RPS26P55-201ENST00000471178 356 ntBASIC2.8□□□□□ -1.96
HERVK_113P62684 RPS27P22-201ENST00000478056 241 ntBASIC2.8□□□□□ -1.96
HERVK_113P62684 Y_RNA.797-201ENST00000515977 94 ntBASIC2.8□□□□□ -1.96
HERVK_113P62684 RNA5SP281-201ENST00000516504 135 ntBASIC2.8□□□□□ -1.96
HERVK_113P62684 RNU6-63P-201ENST00000516690 95 ntBASIC2.8□□□□□ -1.96
HERVK_113P62684 Y_RNA.703-201ENST00000516846 111 ntBASIC2.8□□□□□ -1.96
HERVK_113P62684 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.8□□□□□ -1.96
HERVK_113P62684 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HERVK_113P62684 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.8□□□□□ -1.96
HERVK_113P62684 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HERVK_113P62684 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HERVK_113P62684 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HERVK_113P62684 MIR6073-201ENST00000352083 89 ntBASIC2.79□□□□□ -1.96
HERVK_113P62684 SNORD114-7-201ENST00000362520 77 ntBASIC2.79□□□□□ -1.96
HERVK_113P62684 Y_RNA.170-201ENST00000363746 110 ntBASIC2.79□□□□□ -1.96
HERVK_113P62684 U8.7-201ENST00000364940 136 ntBASIC2.79□□□□□ -1.96
HERVK_113P62684 RNU6-1240P-201ENST00000365155 104 ntBASIC2.79□□□□□ -1.96
HERVK_113P62684 RNU6-125P-201ENST00000384505 107 ntBASIC2.79□□□□□ -1.96
HERVK_113P62684 MIR626-201ENST00000385032 94 ntBASIC2.79□□□□□ -1.96
HERVK_113P62684 MIR561-201ENST00000385216 97 ntBASIC2.79□□□□□ -1.96
HERVK_113P62684 RNA5SP492-201ENST00000411330 114 ntBASIC2.79□□□□□ -1.96
HERVK_113P62684 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.79□□□□□ -1.96
HERVK_113P62684 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.79□□□□□ -1.96
HERVK_113P62684 SNORA4.4-201ENST00000515921 135 ntBASIC2.79□□□□□ -1.96
HERVK_113P62684 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.79□□□□□ -1.96
HERVK_113P62684 MIR3144-201ENST00000579460 79 ntBASIC2.79□□□□□ -1.96
HERVK_113P62684 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HERVK_113P62684 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
HERVK_113P62684 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
HERVK_113P62684 AC009487.4-201ENST00000624969 3585 ntBASIC2.78□□□□□ -1.96
HERVK_113P62684 RNA5SP125-201ENST00000364843 120 ntBASIC2.78□□□□□ -1.96
HERVK_113P62684 RNU6-969P-201ENST00000383900 105 ntBASIC2.78□□□□□ -1.96
HERVK_113P62684 Y_RNA.412-201ENST00000384001 104 ntBASIC2.78□□□□□ -1.96
HERVK_113P62684 RNU6-381P-201ENST00000391259 108 ntBASIC2.78□□□□□ -1.96
HERVK_113P62684 AC016909.1-201ENST00000415916 166 ntBASIC2.78□□□□□ -1.96
HERVK_113P62684 AC123900.1-201ENST00000420390 96 ntBASIC2.78□□□□□ -1.96
HERVK_113P62684 HSPE1P13-201ENST00000451143 297 ntBASIC2.78□□□□□ -1.96
HERVK_113P62684 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.78□□□□□ -1.96
HERVK_113P62684 AC093259.1-201ENST00000509755 300 ntBASIC2.78□□□□□ -1.96
HERVK_113P62684 AC026436.1-201ENST00000510537 270 ntBASIC2.78□□□□□ -1.96
HERVK_113P62684 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.78□□□□□ -1.96
HERVK_113P62684 RNU2-34P-201ENST00000516534 121 ntBASIC2.78□□□□□ -1.96
HERVK_113P62684 RNU6-667P-201ENST00000517186 102 ntBASIC2.78□□□□□ -1.96
HERVK_113P62684 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.78□□□□□ -1.96
HERVK_113P62684 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.78□□□□□ -1.96
HERVK_113P62684 MIR548AY-201ENST00000617669 107 ntBASIC2.78□□□□□ -1.96
HERVK_113P62684 MIR1291-201ENST00000627649 87 ntBASIC2.78□□□□□ -1.96
HERVK_113P62684 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.78□□□□□ -1.96
HERVK_113P62684 AC016717.2-201ENST00000609089 5141 ntBASIC2.78□□□□□ -1.96
HERVK_113P62684 AL159152.1-201ENST00000635019 2587 ntBASIC2.77□□□□□ -1.97
HERVK_113P62684 MIR367-201ENST00000362299 68 ntBASIC2.77□□□□□ -1.97
HERVK_113P62684 Y_RNA.121-201ENST00000363309 113 ntBASIC2.77□□□□□ -1.97
HERVK_113P62684 snoU2_19.4-201ENST00000364329 80 ntBASIC2.77□□□□□ -1.97
HERVK_113P62684 Y_RNA.398-201ENST00000383952 99 ntBASIC2.77□□□□□ -1.97
HERVK_113P62684 MIR1253-201ENST00000408273 105 ntBASIC2.77□□□□□ -1.97
HERVK_113P62684 RNU6-1135P-201ENST00000411083 103 ntBASIC2.77□□□□□ -1.97
HERVK_113P62684 RNU5E-9P-201ENST00000411164 104 ntBASIC2.77□□□□□ -1.97
HERVK_113P62684 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HERVK_113P62684 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.77□□□□□ -1.97
HERVK_113P62684 RN7SKP164-201ENST00000516138 266 ntBASIC2.77□□□□□ -1.97
HERVK_113P62684 RNU7-115P-201ENST00000516433 55 ntBASIC2.77□□□□□ -1.97
HERVK_113P62684 RNU6-1007P-201ENST00000516586 107 ntBASIC2.77□□□□□ -1.97
HERVK_113P62684 MTND5P41-201ENST00000517498 206 ntBASIC2.77□□□□□ -1.97
HERVK_113P62684 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.77□□□□□ -1.97
HERVK_113P62684 MIR5092-201ENST00000583139 88 ntBASIC2.77□□□□□ -1.97
HERVK_113P62684 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.77□□□□□ -1.97
HERVK_113P62684 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
HERVK_113P62684 RNU4-13P-201ENST00000364019 141 ntBASIC2.76□□□□□ -1.97
HERVK_113P62684 Y_RNA.357-201ENST00000365487 109 ntBASIC2.76□□□□□ -1.97
HERVK_113P62684 RNU6-136P-201ENST00000384663 107 ntBASIC2.76□□□□□ -1.97
HERVK_113P62684 MIR1289-2-201ENST00000408360 111 ntBASIC2.76□□□□□ -1.97
HERVK_113P62684 RNA5SP181-201ENST00000410246 98 ntBASIC2.76□□□□□ -1.97
HERVK_113P62684 SNORA36B-201ENST00000410438 131 ntBASIC2.76□□□□□ -1.97
HERVK_113P62684 RNU6-394P-201ENST00000410735 107 ntBASIC2.76□□□□□ -1.97
HERVK_113P62684 SEPT7P4-201ENST00000437076 306 ntBASIC2.76□□□□□ -1.97
HERVK_113P62684 MTCO1P44-201ENST00000441935 243 ntBASIC2.76□□□□□ -1.97
HERVK_113P62684 AL357134.1-201ENST00000445848 426 ntBASIC2.76□□□□□ -1.97
HERVK_113P62684 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.76□□□□□ -1.97
HERVK_113P62684 AC245047.8-201ENST00000456455 284 ntBASIC2.76□□□□□ -1.97
HERVK_113P62684 RNU6-346P-201ENST00000516288 111 ntBASIC2.76□□□□□ -1.97
HERVK_113P62684 RPPH1-2P-201ENST00000516688 293 ntBASIC2.76□□□□□ -1.97
HERVK_113P62684 RNU6-789P-201ENST00000517105 102 ntBASIC2.76□□□□□ -1.97
HERVK_113P62684 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.76□□□□□ -1.97
HERVK_113P62684 MIR4724-201ENST00000579485 89 ntBASIC2.76□□□□□ -1.97
HERVK_113P62684 POLR3GP1-201ENST00000594073 261 ntBASIC2.76□□□□□ -1.97
HERVK_113P62684 AL137847.3-201ENST00000611521 109 ntBASIC2.76□□□□□ -1.97
HERVK_113P62684 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms