Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC011476.5-201ENST00000615594 130 ntBASIC1.42□□□□□ -2.18
PEX3P56589 AL138825.1-201ENST00000618587 192 ntBASIC1.42□□□□□ -2.18
PEX3P56589 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
PEX3P56589 AL391987.6-201ENST00000305671 199 ntBASIC1.41□□□□□ -2.18
PEX3P56589 MIR424-201ENST00000362227 98 ntBASIC1.41□□□□□ -2.18
PEX3P56589 MIR126-201ENST00000362291 85 ntBASIC1.41□□□□□ -2.18
PEX3P56589 Y_RNA.39-201ENST00000362620 98 ntBASIC1.41□□□□□ -2.18
PEX3P56589 Y_RNA.338-201ENST00000365320 114 ntBASIC1.41□□□□□ -2.18
PEX3P56589 RNU6-1310P-201ENST00000384153 107 ntBASIC1.41□□□□□ -2.18
PEX3P56589 RNU6-474P-201ENST00000384243 107 ntBASIC1.41□□□□□ -2.18
PEX3P56589 MIR30A-201ENST00000385092 71 ntBASIC1.41□□□□□ -2.18
PEX3P56589 RPL21P1-201ENST00000399532 476 ntBASIC1.41□□□□□ -2.18
PEX3P56589 MIR873-201ENST00000401120 77 ntBASIC1.41□□□□□ -2.18
PEX3P56589 RPL23AP36-201ENST00000413895 458 ntBASIC1.41□□□□□ -2.18
PEX3P56589 MTCO3P19-201ENST00000415864 321 ntBASIC1.41□□□□□ -2.18
PEX3P56589 JTBP1-201ENST00000441314 247 ntBASIC1.41□□□□□ -2.18
PEX3P56589 MTND4P19-201ENST00000446659 478 ntBASIC1.41□□□□□ -2.18
PEX3P56589 snoU13.27-201ENST00000459278 104 ntBASIC1.41□□□□□ -2.18
PEX3P56589 AC005908.1-201ENST00000468701 347 ntBASIC1.41□□□□□ -2.18
PEX3P56589 RPS26P55-201ENST00000471178 356 ntBASIC1.41□□□□□ -2.18
PEX3P56589 RNU6-1170P-201ENST00000515974 106 ntBASIC1.41□□□□□ -2.18
PEX3P56589 RNU1-142P-201ENST00000516682 145 ntBASIC1.41□□□□□ -2.18
PEX3P56589 AC068338.1-201ENST00000565567 176 ntBASIC1.41□□□□□ -2.18
PEX3P56589 AC004467.1-201ENST00000615678 330 ntBASIC1.41□□□□□ -2.18
PEX3P56589 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.41□□□□□ -2.18
PEX3P56589 AC095038.3-201ENST00000634439 195 ntBASIC1.41□□□□□ -2.18
PEX3P56589 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
PEX3P56589 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
PEX3P56589 Y_RNA.80-201ENST00000362996 102 ntBASIC1.4□□□□□ -2.19
PEX3P56589 RNU6-797P-201ENST00000363101 109 ntBASIC1.4□□□□□ -2.19
PEX3P56589 Y_RNA.148-201ENST00000363557 117 ntBASIC1.4□□□□□ -2.19
PEX3P56589 Y_RNA.230-201ENST00000364348 109 ntBASIC1.4□□□□□ -2.19
PEX3P56589 RNU6-20P-201ENST00000384106 107 ntBASIC1.4□□□□□ -2.19
PEX3P56589 Y_RNA.458-201ENST00000384240 102 ntBASIC1.4□□□□□ -2.19
PEX3P56589 Y_RNA.460-201ENST00000384255 102 ntBASIC1.4□□□□□ -2.19
PEX3P56589 Y_RNA.485-201ENST00000384395 102 ntBASIC1.4□□□□□ -2.19
PEX3P56589 Y_RNA.570-201ENST00000384750 101 ntBASIC1.4□□□□□ -2.19
PEX3P56589 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
PEX3P56589 MIR1302-11-201ENST00000408051 138 ntBASIC1.4□□□□□ -2.19
PEX3P56589 MIR1302-9-201ENST00000408365 138 ntBASIC1.4□□□□□ -2.19
PEX3P56589 MIR1302-10-201ENST00000408734 138 ntBASIC1.4□□□□□ -2.19
PEX3P56589 RNU2-54P-201ENST00000410299 190 ntBASIC1.4□□□□□ -2.19
PEX3P56589 RNA5SP475-201ENST00000410568 110 ntBASIC1.4□□□□□ -2.19
PEX3P56589 AL160004.2-201ENST00000432935 350 ntBASIC1.4□□□□□ -2.19
PEX3P56589 RPS27P22-201ENST00000478056 241 ntBASIC1.4□□□□□ -2.19
PEX3P56589 AL163540.1-201ENST00000485382 386 ntBASIC1.4□□□□□ -2.19
PEX3P56589 AC093852.1-201ENST00000503587 266 ntBASIC1.4□□□□□ -2.19
PEX3P56589 AC108729.3-201ENST00000513484 108 ntBASIC1.4□□□□□ -2.19
PEX3P56589 AC091178.2-201ENST00000584401 117 ntBASIC1.4□□□□□ -2.19
PEX3P56589 MIR1302-2-201ENST00000607096 138 ntBASIC1.4□□□□□ -2.19
PEX3P56589 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.4□□□□□ -2.19
PEX3P56589 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.4□□□□□ -2.19
PEX3P56589 MIR8074-201ENST00000615081 81 ntBASIC1.4□□□□□ -2.19
PEX3P56589 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.4□□□□□ -2.19
PEX3P56589 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.4□□□□□ -2.19
PEX3P56589 AC245060.5-201ENST00000610778 3293 ntBASIC1.39□□□□□ -2.19
PEX3P56589 RNU6-308P-201ENST00000390957 107 ntBASIC1.39□□□□□ -2.19
PEX3P56589 RNA5SP323-201ENST00000391094 133 ntBASIC1.39□□□□□ -2.19
PEX3P56589 Y_RNA.645-201ENST00000391229 102 ntBASIC1.39□□□□□ -2.19
PEX3P56589 RNU6-1186P-201ENST00000410429 97 ntBASIC1.39□□□□□ -2.19
PEX3P56589 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.39□□□□□ -2.19
PEX3P56589 HMGN1P13-201ENST00000505795 138 ntBASIC1.39□□□□□ -2.19
PEX3P56589 RNA5SP20-201ENST00000515976 84 ntBASIC1.39□□□□□ -2.19
PEX3P56589 RN7SKP295-201ENST00000517264 153 ntBASIC1.39□□□□□ -2.19
PEX3P56589 AC027419.1-201ENST00000522976 328 ntBASIC1.39□□□□□ -2.19
PEX3P56589 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.39□□□□□ -2.19
PEX3P56589 AC022441.3-201ENST00000605737 136 ntBASIC1.39□□□□□ -2.19
PEX3P56589 AL121655.1-201ENST00000605811 308 ntBASIC1.39□□□□□ -2.19
PEX3P56589 AC090971.5-201ENST00000621102 293 ntBASIC1.39□□□□□ -2.19
PEX3P56589 AC018630.2-201ENST00000534866 2403 ntBASIC1.39□□□□□ -2.19
PEX3P56589 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
PEX3P56589 RNU6-626P-201ENST00000363354 107 ntBASIC1.38□□□□□ -2.19
PEX3P56589 Y_RNA.138-201ENST00000363462 102 ntBASIC1.38□□□□□ -2.19
PEX3P56589 RNU6-271P-201ENST00000363858 105 ntBASIC1.38□□□□□ -2.19
PEX3P56589 RNU5A-5P-201ENST00000411054 116 ntBASIC1.38□□□□□ -2.19
PEX3P56589 RNU6-130P-201ENST00000411112 103 ntBASIC1.38□□□□□ -2.19
PEX3P56589 RPEP5-201ENST00000441137 268 ntBASIC1.38□□□□□ -2.19
PEX3P56589 RPS29P23-201ENST00000458635 123 ntBASIC1.38□□□□□ -2.19
PEX3P56589 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.38□□□□□ -2.19
PEX3P56589 RNU7-172P-201ENST00000517125 64 ntBASIC1.38□□□□□ -2.19
PEX3P56589 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.38□□□□□ -2.19
PEX3P56589 AL160236.1-201ENST00000556317 195 ntBASIC1.38□□□□□ -2.19
PEX3P56589 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.38□□□□□ -2.19
PEX3P56589 AC005176.2-201ENST00000596933 147 ntBASIC1.38□□□□□ -2.19
PEX3P56589 AC073413.2-201ENST00000604332 360 ntBASIC1.38□□□□□ -2.19
PEX3P56589 AC016925.2-201ENST00000605108 242 ntBASIC1.38□□□□□ -2.19
PEX3P56589 AC006157.1-201ENST00000611750 366 ntBASIC1.38□□□□□ -2.19
PEX3P56589 AL021879.1-201ENST00000611756 288 ntBASIC1.38□□□□□ -2.19
PEX3P56589 PART1_1.1-201ENST00000611761 217 ntBASIC1.38□□□□□ -2.19
PEX3P56589 MIR8054-201ENST00000620877 86 ntBASIC1.38□□□□□ -2.19
PEX3P56589 AC090574.1-201ENST00000623186 233 ntBASIC1.38□□□□□ -2.19
PEX3P56589 AC091812.1-201ENST00000432235 1948 ntBASIC1.37□□□□□ -2.19
PEX3P56589 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
PEX3P56589 Y_RNA.446-201ENST00000384178 104 ntBASIC1.37□□□□□ -2.19
PEX3P56589 AL031003.1-201ENST00000404229 172 ntBASIC1.37□□□□□ -2.19
PEX3P56589 RNU2-7P-201ENST00000410794 178 ntBASIC1.37□□□□□ -2.19
PEX3P56589 RNU2-61P-201ENST00000411069 191 ntBASIC1.37□□□□□ -2.19
PEX3P56589 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.37□□□□□ -2.19
PEX3P56589 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.37□□□□□ -2.19
PEX3P56589 AC245047.3-201ENST00000429428 127 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms