Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC245060.5-201ENST00000610778 3293 ntBASIC1.97□□□□□ -2.09
CDH12P55289 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
CDH12P55289 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.96□□□□□ -2.1
CDH12P55289 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CDH12P55289 RNU6-1272P-201ENST00000362776 107 ntBASIC1.96□□□□□ -2.1
CDH12P55289 Y_RNA.76-201ENST00000362931 109 ntBASIC1.96□□□□□ -2.1
CDH12P55289 RNU6-1048P-201ENST00000364054 107 ntBASIC1.96□□□□□ -2.1
CDH12P55289 Y_RNA.341-201ENST00000365341 102 ntBASIC1.96□□□□□ -2.1
CDH12P55289 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.96□□□□□ -2.1
CDH12P55289 RNU6-338P-201ENST00000383888 105 ntBASIC1.96□□□□□ -2.1
CDH12P55289 RNU6-1248P-201ENST00000391096 64 ntBASIC1.96□□□□□ -2.1
CDH12P55289 SNORA26.5-201ENST00000391215 123 ntBASIC1.96□□□□□ -2.1
CDH12P55289 RNU2-14P-201ENST00000411053 191 ntBASIC1.96□□□□□ -2.1
CDH12P55289 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CDH12P55289 RPS20P10-201ENST00000451209 253 ntBASIC1.96□□□□□ -2.1
CDH12P55289 Y_RNA.637-201ENST00000459424 114 ntBASIC1.96□□□□□ -2.1
CDH12P55289 AC079804.2-201ENST00000490376 200 ntBASIC1.96□□□□□ -2.1
CDH12P55289 AC136628.3-201ENST00000521868 290 ntBASIC1.96□□□□□ -2.1
CDH12P55289 SNORD53-201ENST00000579969 78 ntBASIC1.96□□□□□ -2.1
CDH12P55289 AC005357.1-201ENST00000588399 301 ntBASIC1.96□□□□□ -2.1
CDH12P55289 AL162424.1-201ENST00000602325 221 ntBASIC1.96□□□□□ -2.1
CDH12P55289 BX284668.6-201ENST00000606899 438 ntBASIC1.96□□□□□ -2.1
CDH12P55289 AC004832.4-201ENST00000608952 331 ntBASIC1.96□□□□□ -2.1
CDH12P55289 AC078938.1-201ENST00000620993 318 ntBASIC1.96□□□□□ -2.1
CDH12P55289 Y_RNA.122-201ENST00000363331 96 ntBASIC1.95□□□□□ -2.1
CDH12P55289 Y_RNA.456-201ENST00000384232 111 ntBASIC1.95□□□□□ -2.1
CDH12P55289 Y_RNA.510-201ENST00000384511 114 ntBASIC1.95□□□□□ -2.1
CDH12P55289 SNORA40.19-201ENST00000390846 128 ntBASIC1.95□□□□□ -2.1
CDH12P55289 RNU6-763P-201ENST00000390865 106 ntBASIC1.95□□□□□ -2.1
CDH12P55289 AL355497.1-201ENST00000406262 551 ntBASIC1.95□□□□□ -2.1
CDH12P55289 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.95□□□□□ -2.1
CDH12P55289 RNU6-1186P-201ENST00000410429 97 ntBASIC1.95□□□□□ -2.1
CDH12P55289 EBAG9P1-201ENST00000418955 543 ntBASIC1.95□□□□□ -2.1
CDH12P55289 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.95□□□□□ -2.1
CDH12P55289 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.95□□□□□ -2.1
CDH12P55289 SCARNA16.3-201ENST00000516595 184 ntBASIC1.95□□□□□ -2.1
CDH12P55289 RNU7-172P-201ENST00000517125 64 ntBASIC1.95□□□□□ -2.1
CDH12P55289 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.95□□□□□ -2.1
CDH12P55289 AC005786.1-201ENST00000588553 154 ntBASIC1.95□□□□□ -2.1
CDH12P55289 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.95□□□□□ -2.1
CDH12P55289 snoU18.1-201ENST00000629629 71 ntBASIC1.95□□□□□ -2.1
CDH12P55289 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CDH12P55289 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
CDH12P55289 AC068700.1-201ENST00000565862 3754 ntBASIC1.94□□□□□ -2.1
CDH12P55289 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
CDH12P55289 Y_RNA.65-201ENST00000362846 100 ntBASIC1.94□□□□□ -2.1
CDH12P55289 Y_RNA.82-201ENST00000363000 102 ntBASIC1.94□□□□□ -2.1
CDH12P55289 Y_RNA.92-201ENST00000363043 102 ntBASIC1.94□□□□□ -2.1
CDH12P55289 Y_RNA.235-201ENST00000364412 102 ntBASIC1.94□□□□□ -2.1
CDH12P55289 Y_RNA.269-201ENST00000364685 89 ntBASIC1.94□□□□□ -2.1
CDH12P55289 Y_RNA.306-201ENST00000365015 102 ntBASIC1.94□□□□□ -2.1
CDH12P55289 Y_RNA.312-201ENST00000365089 102 ntBASIC1.94□□□□□ -2.1
CDH12P55289 Y_RNA.322-201ENST00000365151 102 ntBASIC1.94□□□□□ -2.1
CDH12P55289 SNORA72.4-201ENST00000384174 132 ntBASIC1.94□□□□□ -2.1
CDH12P55289 RNA5SP465-201ENST00000391195 109 ntBASIC1.94□□□□□ -2.1
CDH12P55289 RNA5SP511-201ENST00000410487 115 ntBASIC1.94□□□□□ -2.1
CDH12P55289 RNU4-53P-201ENST00000410828 140 ntBASIC1.94□□□□□ -2.1
CDH12P55289 CST2P1-201ENST00000425770 87 ntBASIC1.94□□□□□ -2.1
CDH12P55289 SNORD2.1-201ENST00000458762 69 ntBASIC1.94□□□□□ -2.1
CDH12P55289 Y_RNA.650-201ENST00000459002 102 ntBASIC1.94□□□□□ -2.1
CDH12P55289 U8.19-201ENST00000459095 133 ntBASIC1.94□□□□□ -2.1
CDH12P55289 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.94□□□□□ -2.1
CDH12P55289 Y_RNA.777-201ENST00000516982 102 ntBASIC1.94□□□□□ -2.1
CDH12P55289 AC015720.1-201ENST00000565251 277 ntBASIC1.94□□□□□ -2.1
CDH12P55289 MIR4282-201ENST00000583613 67 ntBASIC1.94□□□□□ -2.1
CDH12P55289 AC007229.1-201ENST00000590455 412 ntBASIC1.94□□□□□ -2.1
CDH12P55289 Y_RNA.771-201ENST00000598668 102 ntBASIC1.94□□□□□ -2.1
CDH12P55289 AL008718.3-201ENST00000610217 321 ntBASIC1.94□□□□□ -2.1
CDH12P55289 Y_RNA.789-201ENST00000622480 102 ntBASIC1.94□□□□□ -2.1
CDH12P55289 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CDH12P55289 AC134026.1-201ENST00000623249 2239 ntBASIC1.94□□□□□ -2.1
CDH12P55289 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.93□□□□□ -2.1
CDH12P55289 RNU4-52P-201ENST00000384209 138 ntBASIC1.93□□□□□ -2.1
CDH12P55289 RNU6-136P-201ENST00000384663 107 ntBASIC1.93□□□□□ -2.1
CDH12P55289 MIR23A-201ENST00000385245 73 ntBASIC1.93□□□□□ -2.1
CDH12P55289 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.93□□□□□ -2.1
CDH12P55289 OOSP1P1-201ENST00000423265 274 ntBASIC1.93□□□□□ -2.1
CDH12P55289 BTF3P11-201ENST00000426582 477 ntBASIC1.93□□□□□ -2.1
CDH12P55289 SNORD116-28-201ENST00000516123 91 ntBASIC1.93□□□□□ -2.1
CDH12P55289 RNU7-99P-201ENST00000516271 62 ntBASIC1.93□□□□□ -2.1
CDH12P55289 RNVU1-2-201ENST00000516326 135 ntBASIC1.93□□□□□ -2.1
CDH12P55289 MIR4672-201ENST00000583126 81 ntBASIC1.93□□□□□ -2.1
CDH12P55289 AC073413.2-201ENST00000604332 360 ntBASIC1.93□□□□□ -2.1
CDH12P55289 AC011921.3-201ENST00000605540 361 ntBASIC1.93□□□□□ -2.1
CDH12P55289 AC090425.1-201ENST00000610007 140 ntBASIC1.93□□□□□ -2.1
CDH12P55289 AL359075.3-201ENST00000613288 217 ntBASIC1.93□□□□□ -2.1
CDH12P55289 AL078604.3-201ENST00000615580 211 ntBASIC1.93□□□□□ -2.1
CDH12P55289 AC012640.5-201ENST00000623897 319 ntBASIC1.93□□□□□ -2.1
CDH12P55289 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.92□□□□□ -2.1
CDH12P55289 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CDH12P55289 RNU6-211P-201ENST00000384047 107 ntBASIC1.92□□□□□ -2.1
CDH12P55289 SNORA11.4-201ENST00000408823 129 ntBASIC1.92□□□□□ -2.1
CDH12P55289 Y_RNA.590-201ENST00000410140 107 ntBASIC1.92□□□□□ -2.1
CDH12P55289 RNA5SP450-201ENST00000411206 102 ntBASIC1.92□□□□□ -2.1
CDH12P55289 AL162725.1-201ENST00000435405 301 ntBASIC1.92□□□□□ -2.1
CDH12P55289 AC104332.1-201ENST00000440471 797 ntBASIC1.92□□□□□ -2.1
CDH12P55289 RNU6-1278P-201ENST00000516130 107 ntBASIC1.92□□□□□ -2.1
CDH12P55289 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.92□□□□□ -2.1
CDH12P55289 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CDH12P55289 RNY1-201ENST00000364228 113 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms