Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL020996.3-201ENST00000606617 222 ntBASIC0.87□□□□□ -2.27
CDH4P55283 AC104260.1-201ENST00000616660 539 ntBASIC0.87□□□□□ -2.27
CDH4P55283 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CDH4P55283 Y_RNA.72-201ENST00000362894 103 ntBASIC0.86□□□□□ -2.27
CDH4P55283 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CDH4P55283 MIR653-201ENST00000385279 96 ntBASIC0.86□□□□□ -2.27
CDH4P55283 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.86□□□□□ -2.27
CDH4P55283 FCF1P9-201ENST00000412546 282 ntBASIC0.86□□□□□ -2.27
CDH4P55283 AC018865.2-201ENST00000423631 129 ntBASIC0.86□□□□□ -2.27
CDH4P55283 CALM2P4-201ENST00000430810 426 ntBASIC0.86□□□□□ -2.27
CDH4P55283 AC002429.1-201ENST00000437672 148 ntBASIC0.86□□□□□ -2.27
CDH4P55283 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.86□□□□□ -2.27
CDH4P55283 AC107399.1-201ENST00000451226 265 ntBASIC0.86□□□□□ -2.27
CDH4P55283 PCNPP5-201ENST00000452246 481 ntBASIC0.86□□□□□ -2.27
CDH4P55283 RNU7-87P-201ENST00000459343 62 ntBASIC0.86□□□□□ -2.27
CDH4P55283 AC091021.1-201ENST00000468051 388 ntBASIC0.86□□□□□ -2.27
CDH4P55283 OR9P1P-201ENST00000496431 281 ntBASIC0.86□□□□□ -2.27
CDH4P55283 AC116353.2-201ENST00000505332 712 ntBASIC0.86□□□□□ -2.27
CDH4P55283 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.86□□□□□ -2.27
CDH4P55283 RNA5SP20-201ENST00000515976 84 ntBASIC0.86□□□□□ -2.27
CDH4P55283 ACA64.5-201ENST00000516207 127 ntBASIC0.86□□□□□ -2.27
CDH4P55283 RNU2-56P-201ENST00000516826 190 ntBASIC0.86□□□□□ -2.27
CDH4P55283 AC090049.2-201ENST00000550377 109 ntBASIC0.86□□□□□ -2.27
CDH4P55283 AC018448.1-201ENST00000552843 316 ntBASIC0.86□□□□□ -2.27
CDH4P55283 AC005828.6-201ENST00000606610 232 ntBASIC0.86□□□□□ -2.27
CDH4P55283 AC073544.1-201ENST00000600110 1595 ntBASIC0.86□□□□□ -2.27
CDH4P55283 Y_RNA.124-201ENST00000363339 93 ntBASIC0.85□□□□□ -2.27
CDH4P55283 RNU6-879P-201ENST00000364328 108 ntBASIC0.85□□□□□ -2.27
CDH4P55283 Y_RNA.358-201ENST00000365491 99 ntBASIC0.85□□□□□ -2.27
CDH4P55283 RNU6-424P-201ENST00000384367 105 ntBASIC0.85□□□□□ -2.27
CDH4P55283 SNORD12-201ENST00000391002 90 ntBASIC0.85□□□□□ -2.27
CDH4P55283 MTCYBP4-201ENST00000401524 249 ntBASIC0.85□□□□□ -2.27
CDH4P55283 POLR2J4-204ENST00000418424 324 ntBASIC0.85□□□□□ -2.27
CDH4P55283 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.85□□□□□ -2.27
CDH4P55283 RPL39P39-201ENST00000455840 151 ntBASIC0.85□□□□□ -2.27
CDH4P55283 SNORD79.1-201ENST00000516069 84 ntBASIC0.85□□□□□ -2.27
CDH4P55283 RNU6-917P-201ENST00000516294 104 ntBASIC0.85□□□□□ -2.27
CDH4P55283 RNU7-30P-201ENST00000516835 62 ntBASIC0.85□□□□□ -2.27
CDH4P55283 RPL21P9-201ENST00000556149 474 ntBASIC0.85□□□□□ -2.27
CDH4P55283 MIR3684-201ENST00000579779 74 ntBASIC0.85□□□□□ -2.27
CDH4P55283 AC011712.1-201ENST00000588959 234 ntBASIC0.85□□□□□ -2.27
CDH4P55283 AC068790.6-201ENST00000602558 258 ntBASIC0.85□□□□□ -2.27
CDH4P55283 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.85□□□□□ -2.27
CDH4P55283 U6.115-201ENST00000636045 103 ntBASIC0.85□□□□□ -2.27
CDH4P55283 Y_RNA.116-201ENST00000363292 103 ntBASIC0.84□□□□□ -2.27
CDH4P55283 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
CDH4P55283 SNORD114-24-201ENST00000365029 72 ntBASIC0.84□□□□□ -2.27
CDH4P55283 RNU6-407P-201ENST00000365280 104 ntBASIC0.84□□□□□ -2.27
CDH4P55283 RNU6-117P-201ENST00000365415 107 ntBASIC0.84□□□□□ -2.27
CDH4P55283 U8.16-201ENST00000391279 133 ntBASIC0.84□□□□□ -2.27
CDH4P55283 RNU4-14P-201ENST00000410858 122 ntBASIC0.84□□□□□ -2.27
CDH4P55283 AL137792.2-201ENST00000443484 235 ntBASIC0.84□□□□□ -2.27
CDH4P55283 AC093850.1-201ENST00000454121 251 ntBASIC0.84□□□□□ -2.27
CDH4P55283 RNU6-341P-201ENST00000516973 96 ntBASIC0.84□□□□□ -2.27
CDH4P55283 AC022868.1-201ENST00000517767 391 ntBASIC0.84□□□□□ -2.27
CDH4P55283 AC092794.2-201ENST00000620933 563 ntBASIC0.84□□□□□ -2.27
CDH4P55283 MIRLET7C-201ENST00000362160 84 ntBASIC0.83□□□□□ -2.28
CDH4P55283 SNORA1B-201ENST00000362535 133 ntBASIC0.83□□□□□ -2.28
CDH4P55283 Y_RNA.267-201ENST00000364679 109 ntBASIC0.83□□□□□ -2.28
CDH4P55283 Y_RNA.363-201ENST00000365529 113 ntBASIC0.83□□□□□ -2.28
CDH4P55283 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.83□□□□□ -2.28
CDH4P55283 Y_RNA.498-201ENST00000384460 102 ntBASIC0.83□□□□□ -2.28
CDH4P55283 SNORA75.4-201ENST00000391278 119 ntBASIC0.83□□□□□ -2.28
CDH4P55283 RNU5A-5P-201ENST00000411054 116 ntBASIC0.83□□□□□ -2.28
CDH4P55283 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.83□□□□□ -2.28
CDH4P55283 UBE2V1P7-201ENST00000446395 340 ntBASIC0.83□□□□□ -2.28
CDH4P55283 RNU6-625P-201ENST00000459412 107 ntBASIC0.83□□□□□ -2.28
CDH4P55283 RPS29P1-201ENST00000465274 159 ntBASIC0.83□□□□□ -2.28
CDH4P55283 RPL17P19-201ENST00000489069 552 ntBASIC0.83□□□□□ -2.28
CDH4P55283 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.83□□□□□ -2.28
CDH4P55283 PDCD5P2-201ENST00000507570 312 ntBASIC0.83□□□□□ -2.28
CDH4P55283 SNORA40.9-201ENST00000515895 93 ntBASIC0.83□□□□□ -2.28
CDH4P55283 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
CDH4P55283 RNU6-1213P-201ENST00000517075 94 ntBASIC0.83□□□□□ -2.28
CDH4P55283 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.83□□□□□ -2.28
CDH4P55283 MIR1244-1-201ENST00000612829 85 ntBASIC0.83□□□□□ -2.28
CDH4P55283 MIR1244-3-201ENST00000635744 85 ntBASIC0.83□□□□□ -2.28
CDH4P55283 MIR1244-2-201ENST00000636449 85 ntBASIC0.83□□□□□ -2.28
CDH4P55283 MIR3674-201ENST00000636576 68 ntBASIC0.83□□□□□ -2.28
CDH4P55283 MIR1244-4-202ENST00000636813 85 ntBASIC0.83□□□□□ -2.28
CDH4P55283 AC005592.1-201ENST00000566527 1640 ntBASIC0.82□□□□□ -2.28
CDH4P55283 RNU6-1301P-201ENST00000362724 104 ntBASIC0.82□□□□□ -2.28
CDH4P55283 Y_RNA.243-201ENST00000364481 109 ntBASIC0.82□□□□□ -2.28
CDH4P55283 Y_RNA.279-201ENST00000364763 95 ntBASIC0.82□□□□□ -2.28
CDH4P55283 RNU1-36P-201ENST00000365130 165 ntBASIC0.82□□□□□ -2.28
CDH4P55283 SNORA2.2-201ENST00000365473 135 ntBASIC0.82□□□□□ -2.28
CDH4P55283 RNU6-767P-201ENST00000384132 107 ntBASIC0.82□□□□□ -2.28
CDH4P55283 SNORA80D-201ENST00000384488 135 ntBASIC0.82□□□□□ -2.28
CDH4P55283 RNU6-192P-201ENST00000391253 100 ntBASIC0.82□□□□□ -2.28
CDH4P55283 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CDH4P55283 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.82□□□□□ -2.28
CDH4P55283 AC004941.2-201ENST00000427009 228 ntBASIC0.82□□□□□ -2.28
CDH4P55283 AC092423.1-201ENST00000430165 186 ntBASIC0.82□□□□□ -2.28
CDH4P55283 RNU7-12P-201ENST00000516030 62 ntBASIC0.82□□□□□ -2.28
CDH4P55283 Y_RNA.691-201ENST00000516611 103 ntBASIC0.82□□□□□ -2.28
CDH4P55283 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.82□□□□□ -2.28
CDH4P55283 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.82□□□□□ -2.28
CDH4P55283 AC005899.2-201ENST00000584353 90 ntBASIC0.82□□□□□ -2.28
CDH4P55283 AL357312.1-201ENST00000603879 298 ntBASIC0.82□□□□□ -2.28
CDH4P55283 AC108706.1-201ENST00000611053 297 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms