Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 SNORA31.17-201ENST00000516953 127 ntBASIC1.97□□□□□ -2.09
NR1H2P55055 AC023157.2-201ENST00000540596 141 ntBASIC1.97□□□□□ -2.09
NR1H2P55055 AC008269.2-201ENST00000561915 1105 ntBASIC1.97□□□□□ -2.09
NR1H2P55055 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.97□□□□□ -2.09
NR1H2P55055 AC012493.3-201ENST00000604494 112 ntBASIC1.97□□□□□ -2.09
NR1H2P55055 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.09
NR1H2P55055 Y_RNA.286-201ENST00000364813 102 ntBASIC1.96□□□□□ -2.1
NR1H2P55055 RNU6-407P-201ENST00000365280 104 ntBASIC1.96□□□□□ -2.1
NR1H2P55055 SNORA67.3-201ENST00000384366 140 ntBASIC1.96□□□□□ -2.1
NR1H2P55055 MIR30A-201ENST00000385092 71 ntBASIC1.96□□□□□ -2.1
NR1H2P55055 RNA5SP467-201ENST00000391274 118 ntBASIC1.96□□□□□ -2.1
NR1H2P55055 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.96□□□□□ -2.1
NR1H2P55055 AL731563.1-201ENST00000442202 214 ntBASIC1.96□□□□□ -2.1
NR1H2P55055 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.96□□□□□ -2.1
NR1H2P55055 RPS27P22-201ENST00000478056 241 ntBASIC1.96□□□□□ -2.1
NR1H2P55055 HMGB3P17-201ENST00000504195 649 ntBASIC1.96□□□□□ -2.1
NR1H2P55055 SEPT14P8-201ENST00000508026 178 ntBASIC1.96□□□□□ -2.1
NR1H2P55055 AC025465.3-201ENST00000510570 311 ntBASIC1.96□□□□□ -2.1
NR1H2P55055 RNU6-1143P-201ENST00000516125 104 ntBASIC1.96□□□□□ -2.1
NR1H2P55055 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.96□□□□□ -2.1
NR1H2P55055 AC005828.6-201ENST00000606610 232 ntBASIC1.96□□□□□ -2.1
NR1H2P55055 SNORD113-5-201ENST00000607261 78 ntBASIC1.96□□□□□ -2.1
NR1H2P55055 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.96□□□□□ -2.1
NR1H2P55055 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
NR1H2P55055 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
NR1H2P55055 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
NR1H2P55055 SNORA27.1-201ENST00000362604 124 ntBASIC1.95□□□□□ -2.1
NR1H2P55055 SNORD81.1-201ENST00000363064 77 ntBASIC1.95□□□□□ -2.1
NR1H2P55055 SNORA33-201ENST00000363664 130 ntBASIC1.95□□□□□ -2.1
NR1H2P55055 RNU6-414P-201ENST00000363705 104 ntBASIC1.95□□□□□ -2.1
NR1H2P55055 Y_RNA.222-201ENST00000364264 102 ntBASIC1.95□□□□□ -2.1
NR1H2P55055 Y_RNA.512-201ENST00000384518 102 ntBASIC1.95□□□□□ -2.1
NR1H2P55055 SNORA64-201ENST00000384674 134 ntBASIC1.95□□□□□ -2.1
NR1H2P55055 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
NR1H2P55055 AL031003.1-201ENST00000404229 172 ntBASIC1.95□□□□□ -2.1
NR1H2P55055 MIR548F4-201ENST00000408515 105 ntBASIC1.95□□□□□ -2.1
NR1H2P55055 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.95□□□□□ -2.1
NR1H2P55055 RPL21P38-201ENST00000418090 167 ntBASIC1.95□□□□□ -2.1
NR1H2P55055 AC010154.1-201ENST00000425857 269 ntBASIC1.95□□□□□ -2.1
NR1H2P55055 RNU6-436P-201ENST00000516171 114 ntBASIC1.95□□□□□ -2.1
NR1H2P55055 RNA5SP200-201ENST00000516360 103 ntBASIC1.95□□□□□ -2.1
NR1H2P55055 AP003733.2-201ENST00000529409 171 ntBASIC1.95□□□□□ -2.1
NR1H2P55055 AL117187.1-201ENST00000555482 181 ntBASIC1.95□□□□□ -2.1
NR1H2P55055 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.95□□□□□ -2.1
NR1H2P55055 AC103810.8-201ENST00000607347 118 ntBASIC1.95□□□□□ -2.1
NR1H2P55055 MIR8074-201ENST00000615081 81 ntBASIC1.95□□□□□ -2.1
NR1H2P55055 AL353997.5-201ENST00000618886 171 ntBASIC1.95□□□□□ -2.1
NR1H2P55055 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NR1H2P55055 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.95□□□□□ -2.1
NR1H2P55055 RNU6-1309P-201ENST00000363305 108 ntBASIC1.94□□□□□ -2.1
NR1H2P55055 Y_RNA.124-201ENST00000363339 93 ntBASIC1.94□□□□□ -2.1
NR1H2P55055 Y_RNA.329-201ENST00000365209 107 ntBASIC1.94□□□□□ -2.1
NR1H2P55055 RNU6-102P-201ENST00000384485 104 ntBASIC1.94□□□□□ -2.1
NR1H2P55055 MIR215-201ENST00000384858 110 ntBASIC1.94□□□□□ -2.1
NR1H2P55055 RNU6-482P-201ENST00000391068 107 ntBASIC1.94□□□□□ -2.1
NR1H2P55055 RNU6-1186P-201ENST00000410429 97 ntBASIC1.94□□□□□ -2.1
NR1H2P55055 AL358176.2-201ENST00000425769 204 ntBASIC1.94□□□□□ -2.1
NR1H2P55055 RNU7-94P-201ENST00000459576 63 ntBASIC1.94□□□□□ -2.1
NR1H2P55055 RNA5SP20-201ENST00000515976 84 ntBASIC1.94□□□□□ -2.1
NR1H2P55055 MIR4438-201ENST00000585271 93 ntBASIC1.94□□□□□ -2.1
NR1H2P55055 PRR13P7-201ENST00000605538 430 ntBASIC1.94□□□□□ -2.1
NR1H2P55055 U6.73-201ENST00000619194 103 ntBASIC1.94□□□□□ -2.1
NR1H2P55055 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.94□□□□□ -2.1
NR1H2P55055 MIR219B-201ENST00000637023 88 ntBASIC1.94□□□□□ -2.1
NR1H2P55055 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.93□□□□□ -2.1
NR1H2P55055 AL356292.1-201ENST00000283110 373 ntBASIC1.93□□□□□ -2.1
NR1H2P55055 RNU6-271P-201ENST00000363858 105 ntBASIC1.93□□□□□ -2.1
NR1H2P55055 RNU6-1105P-201ENST00000384774 107 ntBASIC1.93□□□□□ -2.1
NR1H2P55055 MIR873-201ENST00000401120 77 ntBASIC1.93□□□□□ -2.1
NR1H2P55055 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.93□□□□□ -2.1
NR1H2P55055 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.93□□□□□ -2.1
NR1H2P55055 HSPE1P9-201ENST00000440046 311 ntBASIC1.93□□□□□ -2.1
NR1H2P55055 MRPS10P1-201ENST00000448483 130 ntBASIC1.93□□□□□ -2.1
NR1H2P55055 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.93□□□□□ -2.1
NR1H2P55055 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.93□□□□□ -2.1
NR1H2P55055 AC008834.1-201ENST00000511612 175 ntBASIC1.93□□□□□ -2.1
NR1H2P55055 RNU6-496P-201ENST00000516145 99 ntBASIC1.93□□□□□ -2.1
NR1H2P55055 RNU7-99P-201ENST00000516271 62 ntBASIC1.93□□□□□ -2.1
NR1H2P55055 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.93□□□□□ -2.1
NR1H2P55055 snoU2_19.2-201ENST00000363024 80 ntBASIC1.92□□□□□ -2.1
NR1H2P55055 Y_RNA.176-201ENST00000363815 109 ntBASIC1.92□□□□□ -2.1
NR1H2P55055 Y_RNA.361-201ENST00000365515 120 ntBASIC1.92□□□□□ -2.1
NR1H2P55055 RNU6-713P-201ENST00000384761 107 ntBASIC1.92□□□□□ -2.1
NR1H2P55055 Y_RNA.574-201ENST00000384766 95 ntBASIC1.92□□□□□ -2.1
NR1H2P55055 MIR221-201ENST00000385135 110 ntBASIC1.92□□□□□ -2.1
NR1H2P55055 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
NR1H2P55055 Y_RNA.581-201ENST00000391017 97 ntBASIC1.92□□□□□ -2.1
NR1H2P55055 AL023284.1-201ENST00000403956 276 ntBASIC1.92□□□□□ -2.1
NR1H2P55055 AL603825.1-201ENST00000438481 80 ntBASIC1.92□□□□□ -2.1
NR1H2P55055 HSPE1P25-201ENST00000455484 251 ntBASIC1.92□□□□□ -2.1
NR1H2P55055 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.92□□□□□ -2.1
NR1H2P55055 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
NR1H2P55055 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
NR1H2P55055 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
NR1H2P55055 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.91□□□□□ -2.1
NR1H2P55055 RNU4-90P-201ENST00000362773 141 ntBASIC1.91□□□□□ -2.1
NR1H2P55055 Y_RNA.140-201ENST00000363474 103 ntBASIC1.91□□□□□ -2.1
NR1H2P55055 Y_RNA.383-201ENST00000383855 97 ntBASIC1.91□□□□□ -2.1
NR1H2P55055 RNU6-505P-201ENST00000384427 107 ntBASIC1.91□□□□□ -2.1
NR1H2P55055 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms