Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.13□□□□□ -2.07
PMS2P54278 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
PMS2P54278 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
PMS2P54278 MIR340-201ENST00000362125 95 ntBASIC2.12□□□□□ -2.07
PMS2P54278 RNU1-58P-201ENST00000362413 163 ntBASIC2.12□□□□□ -2.07
PMS2P54278 Y_RNA.44-201ENST00000362676 108 ntBASIC2.12□□□□□ -2.07
PMS2P54278 RNU6-1164P-201ENST00000364428 107 ntBASIC2.12□□□□□ -2.07
PMS2P54278 Y_RNA.477-201ENST00000384352 108 ntBASIC2.12□□□□□ -2.07
PMS2P54278 RNU6-1248P-201ENST00000391096 64 ntBASIC2.12□□□□□ -2.07
PMS2P54278 MRPS10P1-201ENST00000448483 130 ntBASIC2.12□□□□□ -2.07
PMS2P54278 RNU6-191P-201ENST00000516295 94 ntBASIC2.12□□□□□ -2.07
PMS2P54278 RNU6-111P-201ENST00000517179 105 ntBASIC2.12□□□□□ -2.07
PMS2P54278 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.12□□□□□ -2.07
PMS2P54278 AL159152.1-201ENST00000635019 2587 ntBASIC2.12□□□□□ -2.07
PMS2P54278 AC008555.8-201ENST00000623602 2168 ntBASIC2.11□□□□□ -2.07
PMS2P54278 Y_RNA.275-201ENST00000364726 110 ntBASIC2.11□□□□□ -2.07
PMS2P54278 Y_RNA.329-201ENST00000365209 107 ntBASIC2.11□□□□□ -2.07
PMS2P54278 RNU6-907P-201ENST00000390924 102 ntBASIC2.11□□□□□ -2.07
PMS2P54278 AL031003.1-201ENST00000404229 172 ntBASIC2.11□□□□□ -2.07
PMS2P54278 BX510359.4-201ENST00000423750 193 ntBASIC2.11□□□□□ -2.07
PMS2P54278 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.11□□□□□ -2.07
PMS2P54278 AC010531.2-201ENST00000465012 153 ntBASIC2.11□□□□□ -2.07
PMS2P54278 AC091959.1-201ENST00000495857 238 ntBASIC2.11□□□□□ -2.07
PMS2P54278 AC025647.1-201ENST00000517879 253 ntBASIC2.11□□□□□ -2.07
PMS2P54278 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.11□□□□□ -2.07
PMS2P54278 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.11□□□□□ -2.07
PMS2P54278 MIR4643-201ENST00000577473 78 ntBASIC2.11□□□□□ -2.07
PMS2P54278 MIR4282-201ENST00000583613 67 ntBASIC2.11□□□□□ -2.07
PMS2P54278 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
PMS2P54278 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.1□□□□□ -2.07
PMS2P54278 SNORA25.1-201ENST00000362326 128 ntBASIC2.1□□□□□ -2.07
PMS2P54278 Y_RNA.82-201ENST00000363000 102 ntBASIC2.1□□□□□ -2.07
PMS2P54278 Y_RNA.92-201ENST00000363043 102 ntBASIC2.1□□□□□ -2.07
PMS2P54278 Y_RNA.217-201ENST00000364214 105 ntBASIC2.1□□□□□ -2.07
PMS2P54278 Y_RNA.235-201ENST00000364412 102 ntBASIC2.1□□□□□ -2.07
PMS2P54278 Y_RNA.277-201ENST00000364754 102 ntBASIC2.1□□□□□ -2.07
PMS2P54278 Y_RNA.306-201ENST00000365015 102 ntBASIC2.1□□□□□ -2.07
PMS2P54278 Y_RNA.312-201ENST00000365089 102 ntBASIC2.1□□□□□ -2.07
PMS2P54278 Y_RNA.322-201ENST00000365151 102 ntBASIC2.1□□□□□ -2.07
PMS2P54278 RNU6-418P-201ENST00000384035 107 ntBASIC2.1□□□□□ -2.07
PMS2P54278 RNU11-3P-201ENST00000391111 133 ntBASIC2.1□□□□□ -2.07
PMS2P54278 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.1□□□□□ -2.07
PMS2P54278 SUMO2P12-201ENST00000405924 140 ntBASIC2.1□□□□□ -2.07
PMS2P54278 RNU2-61P-201ENST00000411069 191 ntBASIC2.1□□□□□ -2.07
PMS2P54278 RNA5SP450-201ENST00000411206 102 ntBASIC2.1□□□□□ -2.07
PMS2P54278 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.1□□□□□ -2.07
PMS2P54278 AC016717.1-201ENST00000448918 286 ntBASIC2.1□□□□□ -2.07
PMS2P54278 RNU1-131P-201ENST00000458943 161 ntBASIC2.1□□□□□ -2.07
PMS2P54278 Y_RNA.650-201ENST00000459002 102 ntBASIC2.1□□□□□ -2.07
PMS2P54278 Y_RNA.641-201ENST00000459414 105 ntBASIC2.1□□□□□ -2.07
PMS2P54278 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.1□□□□□ -2.07
PMS2P54278 AC010598.1-201ENST00000510378 103 ntBASIC2.1□□□□□ -2.07
PMS2P54278 Y_RNA.777-201ENST00000516982 102 ntBASIC2.1□□□□□ -2.07
PMS2P54278 Y_RNA.771-201ENST00000598668 102 ntBASIC2.1□□□□□ -2.07
PMS2P54278 AC009779.6-201ENST00000603972 165 ntBASIC2.1□□□□□ -2.07
PMS2P54278 AC090425.1-201ENST00000610007 140 ntBASIC2.1□□□□□ -2.07
PMS2P54278 AC078938.1-201ENST00000620993 318 ntBASIC2.1□□□□□ -2.07
PMS2P54278 Y_RNA.789-201ENST00000622480 102 ntBASIC2.1□□□□□ -2.07
PMS2P54278 AC006435.5-201ENST00000624486 112 ntBASIC2.1□□□□□ -2.07
PMS2P54278 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
PMS2P54278 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.09□□□□□ -2.07
PMS2P54278 RNU6-23P-201ENST00000363283 107 ntBASIC2.09□□□□□ -2.07
PMS2P54278 RNU6-740P-201ENST00000364734 105 ntBASIC2.09□□□□□ -2.07
PMS2P54278 RNU6-338P-201ENST00000383888 105 ntBASIC2.09□□□□□ -2.07
PMS2P54278 SNORA64-201ENST00000384674 134 ntBASIC2.09□□□□□ -2.07
PMS2P54278 MIR1283-2-201ENST00000408621 87 ntBASIC2.09□□□□□ -2.07
PMS2P54278 RNU6-710P-201ENST00000410424 105 ntBASIC2.09□□□□□ -2.07
PMS2P54278 RNU2-14P-201ENST00000411053 191 ntBASIC2.09□□□□□ -2.07
PMS2P54278 AC024067.1-201ENST00000426199 223 ntBASIC2.09□□□□□ -2.07
PMS2P54278 AL603825.1-201ENST00000438481 80 ntBASIC2.09□□□□□ -2.07
PMS2P54278 MTND2P29-201ENST00000438595 412 ntBASIC2.09□□□□□ -2.07
PMS2P54278 SNORD65B-201ENST00000459126 73 ntBASIC2.09□□□□□ -2.07
PMS2P54278 RPL23AP42-201ENST00000471152 471 ntBASIC2.09□□□□□ -2.07
PMS2P54278 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.09□□□□□ -2.07
PMS2P54278 RNU4-71P-201ENST00000516258 113 ntBASIC2.09□□□□□ -2.07
PMS2P54278 RNU6-856P-201ENST00000516959 98 ntBASIC2.09□□□□□ -2.07
PMS2P54278 RNU6-548P-201ENST00000517083 115 ntBASIC2.09□□□□□ -2.07
PMS2P54278 DEFB117-201ENST00000602356 141 ntBASIC2.09□□□□□ -2.07
PMS2P54278 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.09□□□□□ -2.07
PMS2P54278 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
PMS2P54278 RNU4-80P-201ENST00000363200 141 ntBASIC2.08□□□□□ -2.08
PMS2P54278 Y_RNA.122-201ENST00000363331 96 ntBASIC2.08□□□□□ -2.08
PMS2P54278 SNORD27-201ENST00000363981 72 ntBASIC2.08□□□□□ -2.08
PMS2P54278 RNU6-514P-201ENST00000384208 107 ntBASIC2.08□□□□□ -2.08
PMS2P54278 AL512604.1-201ENST00000404812 257 ntBASIC2.08□□□□□ -2.08
PMS2P54278 AL355796.1-201ENST00000406706 323 ntBASIC2.08□□□□□ -2.08
PMS2P54278 SNORA11.4-201ENST00000408823 129 ntBASIC2.08□□□□□ -2.08
PMS2P54278 RNU6-57P-201ENST00000411348 103 ntBASIC2.08□□□□□ -2.08
PMS2P54278 AC016909.1-201ENST00000415916 166 ntBASIC2.08□□□□□ -2.08
PMS2P54278 AC008134.1-201ENST00000420943 193 ntBASIC2.08□□□□□ -2.08
PMS2P54278 SNORD2.1-201ENST00000458762 69 ntBASIC2.08□□□□□ -2.08
PMS2P54278 RN7SL274P-201ENST00000492268 272 ntBASIC2.08□□□□□ -2.08
PMS2P54278 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.08□□□□□ -2.08
PMS2P54278 SNORA70.12-201ENST00000516084 153 ntBASIC2.08□□□□□ -2.08
PMS2P54278 RPL21P9-201ENST00000556149 474 ntBASIC2.08□□□□□ -2.08
PMS2P54278 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.08□□□□□ -2.08
PMS2P54278 MIR3668-201ENST00000582138 75 ntBASIC2.08□□□□□ -2.08
PMS2P54278 AL512605.2-201ENST00000592972 256 ntBASIC2.08□□□□□ -2.08
PMS2P54278 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.08□□□□□ -2.08
PMS2P54278 AL162424.1-201ENST00000602325 221 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 2140.3 ms