Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 MIR1289-2-201ENST00000408360 111 ntBASIC2.27□□□□□ -2.05
COPAP53621 RPS27P22-201ENST00000478056 241 ntBASIC2.27□□□□□ -2.05
COPAP53621 AC104435.1-201ENST00000483483 166 ntBASIC2.27□□□□□ -2.05
COPAP53621 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.27□□□□□ -2.05
COPAP53621 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.27□□□□□ -2.05
COPAP53621 AC005786.1-201ENST00000588553 154 ntBASIC2.27□□□□□ -2.05
COPAP53621 U2.14-201ENST00000615943 113 ntBASIC2.27□□□□□ -2.05
COPAP53621 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.27□□□□□ -2.05
COPAP53621 MIR6766-201ENST00000622641 72 ntBASIC2.27□□□□□ -2.05
COPAP53621 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
COPAP53621 Y_RNA.44-201ENST00000362676 108 ntBASIC2.26□□□□□ -2.05
COPAP53621 Y_RNA.54-201ENST00000362766 105 ntBASIC2.26□□□□□ -2.05
COPAP53621 RNU6-862P-201ENST00000362804 105 ntBASIC2.26□□□□□ -2.05
COPAP53621 Y_RNA.361-201ENST00000365515 120 ntBASIC2.26□□□□□ -2.05
COPAP53621 Y_RNA.476-201ENST00000384347 108 ntBASIC2.26□□□□□ -2.05
COPAP53621 Y_RNA.477-201ENST00000384352 108 ntBASIC2.26□□□□□ -2.05
COPAP53621 AL158823.1-201ENST00000418441 478 ntBASIC2.26□□□□□ -2.05
COPAP53621 HMGN2P38-201ENST00000423806 265 ntBASIC2.26□□□□□ -2.05
COPAP53621 AC010154.1-201ENST00000425857 269 ntBASIC2.26□□□□□ -2.05
COPAP53621 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.26□□□□□ -2.05
COPAP53621 AC091959.1-201ENST00000495857 238 ntBASIC2.26□□□□□ -2.05
COPAP53621 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
COPAP53621 AL137100.2-201ENST00000555786 315 ntBASIC2.26□□□□□ -2.05
COPAP53621 MIR3128-201ENST00000581957 66 ntBASIC2.26□□□□□ -2.05
COPAP53621 MIR338-201ENST00000636369 67 ntBASIC2.26□□□□□ -2.05
COPAP53621 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
COPAP53621 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
COPAP53621 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
COPAP53621 RNU1-96P-201ENST00000364163 162 ntBASIC2.25□□□□□ -2.05
COPAP53621 SNORA20.1-201ENST00000364790 130 ntBASIC2.25□□□□□ -2.05
COPAP53621 Y_RNA.416-201ENST00000384014 113 ntBASIC2.25□□□□□ -2.05
COPAP53621 SNORA64-201ENST00000384674 134 ntBASIC2.25□□□□□ -2.05
COPAP53621 SNORA11.4-201ENST00000408823 129 ntBASIC2.25□□□□□ -2.05
COPAP53621 RNU2-61P-201ENST00000411069 191 ntBASIC2.25□□□□□ -2.05
COPAP53621 RPL23AP7-203ENST00000449021 469 ntBASIC2.25□□□□□ -2.05
COPAP53621 RNA5SP20-201ENST00000515976 84 ntBASIC2.25□□□□□ -2.05
COPAP53621 RNU6-191P-201ENST00000516295 94 ntBASIC2.25□□□□□ -2.05
COPAP53621 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.25□□□□□ -2.05
COPAP53621 RPL21P9-201ENST00000556149 474 ntBASIC2.25□□□□□ -2.05
COPAP53621 AL353149.1-201ENST00000610667 244 ntBASIC2.25□□□□□ -2.05
COPAP53621 CENPCP1-201ENST00000533085 2578 ntBASIC2.25□□□□□ -2.05
COPAP53621 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.24□□□□□ -2.05
COPAP53621 Y_RNA.124-201ENST00000363339 93 ntBASIC2.24□□□□□ -2.05
COPAP53621 SNORD27-201ENST00000363981 72 ntBASIC2.24□□□□□ -2.05
COPAP53621 Y_RNA.287-201ENST00000364853 94 ntBASIC2.24□□□□□ -2.05
COPAP53621 RNA5SP37-201ENST00000365420 130 ntBASIC2.24□□□□□ -2.05
COPAP53621 AL603910.2-201ENST00000407268 136 ntBASIC2.24□□□□□ -2.05
COPAP53621 RNU6-855P-201ENST00000410395 104 ntBASIC2.24□□□□□ -2.05
COPAP53621 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.24□□□□□ -2.05
COPAP53621 RPL23AP6-201ENST00000446637 472 ntBASIC2.24□□□□□ -2.05
COPAP53621 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.24□□□□□ -2.05
COPAP53621 RPS26P55-201ENST00000471178 356 ntBASIC2.24□□□□□ -2.05
COPAP53621 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.24□□□□□ -2.05
COPAP53621 AC090255.1-201ENST00000495779 349 ntBASIC2.24□□□□□ -2.05
COPAP53621 RNU6-1023P-201ENST00000516137 106 ntBASIC2.24□□□□□ -2.05
COPAP53621 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.24□□□□□ -2.05
COPAP53621 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.24□□□□□ -2.05
COPAP53621 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.24□□□□□ -2.05
COPAP53621 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
COPAP53621 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.23□□□□□ -2.05
COPAP53621 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
COPAP53621 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.23□□□□□ -2.05
COPAP53621 RNA5SP450-201ENST00000411206 102 ntBASIC2.23□□□□□ -2.05
COPAP53621 AC010409.1-201ENST00000487382 476 ntBASIC2.23□□□□□ -2.05
COPAP53621 RNU6-237P-201ENST00000515985 71 ntBASIC2.23□□□□□ -2.05
COPAP53621 Y_RNA.673-201ENST00000516306 88 ntBASIC2.23□□□□□ -2.05
COPAP53621 SNORA27.4-201ENST00000516650 95 ntBASIC2.23□□□□□ -2.05
COPAP53621 MIR3671-201ENST00000580455 88 ntBASIC2.23□□□□□ -2.05
COPAP53621 MIR4524B-201ENST00000581569 115 ntBASIC2.23□□□□□ -2.05
COPAP53621 MIR4438-201ENST00000585271 93 ntBASIC2.23□□□□□ -2.05
COPAP53621 BX284668.6-201ENST00000606899 438 ntBASIC2.23□□□□□ -2.05
COPAP53621 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.23□□□□□ -2.05
COPAP53621 AC022513.1-201ENST00000624512 117 ntBASIC2.23□□□□□ -2.05
COPAP53621 Y_RNA.60-201ENST00000362831 98 ntBASIC2.22□□□□□ -2.05
COPAP53621 SNORA67.3-201ENST00000384366 140 ntBASIC2.22□□□□□ -2.05
COPAP53621 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
COPAP53621 RNA5SP323-201ENST00000391094 133 ntBASIC2.22□□□□□ -2.05
COPAP53621 RNA5SP467-201ENST00000391274 118 ntBASIC2.22□□□□□ -2.05
COPAP53621 AL023284.1-201ENST00000403956 276 ntBASIC2.22□□□□□ -2.05
COPAP53621 AL117342.1-201ENST00000404861 406 ntBASIC2.22□□□□□ -2.05
COPAP53621 RNU6-1186P-201ENST00000410429 97 ntBASIC2.22□□□□□ -2.05
COPAP53621 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
COPAP53621 CST2P1-201ENST00000425770 87 ntBASIC2.22□□□□□ -2.05
COPAP53621 MTND2P29-201ENST00000438595 412 ntBASIC2.22□□□□□ -2.05
COPAP53621 MIR5094-201ENST00000578766 85 ntBASIC2.22□□□□□ -2.05
COPAP53621 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.22□□□□□ -2.05
COPAP53621 AC092881.1-201ENST00000638218 2733 ntBASIC2.21□□□□□ -2.06
COPAP53621 UBE2WP1-201ENST00000362030 340 ntBASIC2.21□□□□□ -2.06
COPAP53621 Y_RNA.275-201ENST00000364726 110 ntBASIC2.21□□□□□ -2.06
COPAP53621 Y_RNA.277-201ENST00000364754 102 ntBASIC2.21□□□□□ -2.06
COPAP53621 Y_RNA.341-201ENST00000365341 102 ntBASIC2.21□□□□□ -2.06
COPAP53621 MIR764-201ENST00000390811 85 ntBASIC2.21□□□□□ -2.06
COPAP53621 SNORA48.3-201ENST00000391081 134 ntBASIC2.21□□□□□ -2.06
COPAP53621 RNA5SP501-201ENST00000410990 112 ntBASIC2.21□□□□□ -2.06
COPAP53621 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.21□□□□□ -2.06
COPAP53621 AC099677.2-201ENST00000436385 175 ntBASIC2.21□□□□□ -2.06
COPAP53621 HSPE1P13-201ENST00000451143 297 ntBASIC2.21□□□□□ -2.06
COPAP53621 snoU13.23-201ENST00000458863 104 ntBASIC2.21□□□□□ -2.06
COPAP53621 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.21□□□□□ -2.06
COPAP53621 MTND1P19-201ENST00000511780 315 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms