Protein–RNA interactions for Protein: P53420

COL4A4, Collagen alpha-4(IV) chain, humanhuman

Predicted RBP Predictions only

Length 1,690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4P53420 SNORA40.9-201ENST00000515895 93 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 RNU7-110P-201ENST00000516891 62 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 RNU6-58P-201ENST00000517143 103 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 AC027288.2-201ENST00000553028 243 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.51□□□□□ -2.17
COL4A4P53420 FAM106DP-201ENST00000586416 501 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 AC068831.7-201ENST00000616954 363 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 AC006001.4-201ENST00000622243 395 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 SCARNA4-202ENST00000625402 129 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.51□□□□□ -2.17
COL4A4P53420 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
COL4A4P53420 RNU6-222P-201ENST00000362438 107 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 RNU6-778P-201ENST00000363269 103 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 RNU6-1020P-201ENST00000363684 107 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 RNU6-879P-201ENST00000364328 108 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 RNU6-335P-201ENST00000364563 113 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 SNORD32A-201ENST00000364805 84 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 Y_RNA.286-201ENST00000364813 102 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 RNU6-1280P-201ENST00000365211 107 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 RNU6-741P-201ENST00000383889 107 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 RNA5SP475-201ENST00000410568 110 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 Y_RNA.629-201ENST00000411368 105 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 NDUFB4P7-201ENST00000423198 363 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.51□□□□□ -2.17
COL4A4P53420 AC078809.1-201ENST00000427601 140 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.51□□□□□ -2.17
COL4A4P53420 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.51□□□□□ -2.17
COL4A4P53420 AC007969.2-201ENST00000441891 191 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 MRPS10P1-201ENST00000448483 130 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 AC087477.1-201ENST00000465747 340 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 RNU6-1114P-201ENST00000516022 107 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 SNORA31.20-201ENST00000517111 133 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.51□□□□□ -2.17
COL4A4P53420 HMGB1P14-201ENST00000557424 591 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 MIR3122-201ENST00000577243 73 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 MIR4308-201ENST00000580634 81 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 MIR5194-201ENST00000582634 120 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.51□□□□□ -2.17
COL4A4P53420 U2.14-201ENST00000615943 113 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 AC091932.3-201ENST00000624223 323 ntBASIC1.51□□□□□ -2.17
COL4A4P53420 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
COL4A4P53420 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
COL4A4P53420 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.51□□□□□ -2.17
COL4A4P53420 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
COL4A4P53420 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
COL4A4P53420 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.5□□□□□ -2.17
COL4A4P53420 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.5□□□□□ -2.17
COL4A4P53420 ZNF204P-201ENST00000416749 2397 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 Y_RNA.7-201ENST00000362352 102 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 RNU5B-2P-201ENST00000363036 113 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 RNU6-1285P-201ENST00000363480 105 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 RNU6-1141P-201ENST00000364520 107 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 Y_RNA.435-201ENST00000384095 112 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 RNU6-622P-201ENST00000384272 103 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 RNU6-804P-201ENST00000384286 107 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 SNORD20-201ENST00000384550 80 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 MIR325-201ENST00000385260 98 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 RNU2-61P-201ENST00000411069 191 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 RNU6-1245P-201ENST00000411130 106 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 RNU5E-9P-201ENST00000411164 104 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 RNU6-1199P-201ENST00000411249 104 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.5□□□□□ -2.17
COL4A4P53420 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.5□□□□□ -2.17
COL4A4P53420 UQCRBP2-201ENST00000447827 297 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 RPS20P10-201ENST00000451209 253 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 AC005042.3-201ENST00000453230 174 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 RNU6-1183P-201ENST00000517054 60 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 AC019176.1-201ENST00000518519 225 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
COL4A4P53420 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.5□□□□□ -2.17
COL4A4P53420 AL391261.3-201ENST00000557194 520 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.5□□□□□ -2.17
COL4A4P53420 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.5□□□□□ -2.17
COL4A4P53420 AC006380.1-201ENST00000603598 186 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.5□□□□□ -2.17
COL4A4P53420 AL596028.1-201ENST00000326971 197 ntBASIC1.49□□□□□ -2.17
COL4A4P53420 RNU6-653P-201ENST00000363074 106 ntBASIC1.49□□□□□ -2.17
COL4A4P53420 RNU4-56P-201ENST00000364700 142 ntBASIC1.49□□□□□ -2.17
COL4A4P53420 RNU6-926P-201ENST00000384075 107 ntBASIC1.49□□□□□ -2.17
COL4A4P53420 RNU6-843P-201ENST00000384454 104 ntBASIC1.49□□□□□ -2.17
COL4A4P53420 RNY1P4-201ENST00000384595 115 ntBASIC1.49□□□□□ -2.17
COL4A4P53420 RNU6-658P-201ENST00000384606 106 ntBASIC1.49□□□□□ -2.17
COL4A4P53420 RNU6-1248P-201ENST00000391096 64 ntBASIC1.49□□□□□ -2.17
COL4A4P53420 MIR1290-201ENST00000408735 78 ntBASIC1.49□□□□□ -2.17
COL4A4P53420 RPL27AP8-201ENST00000424277 446 ntBASIC1.49□□□□□ -2.17
COL4A4P53420 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.49□□□□□ -2.17
COL4A4P53420 RAB28P5-201ENST00000427490 651 ntBASIC1.49□□□□□ -2.17
COL4A4P53420 AC007919.1-201ENST00000429380 217 ntBASIC1.49□□□□□ -2.17
COL4A4P53420 AP000870.1-201ENST00000472927 406 ntBASIC1.49□□□□□ -2.17
COL4A4P53420 RNA5SP291-201ENST00000517222 105 ntBASIC1.49□□□□□ -2.17
COL4A4P53420 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.49□□□□□ -2.17
COL4A4P53420 AC233702.2-202ENST00000562547 291 ntBASIC1.49□□□□□ -2.17
COL4A4P53420 AC068338.1-201ENST00000565567 176 ntBASIC1.49□□□□□ -2.17
COL4A4P53420 MIR5692C2-201ENST00000577959 77 ntBASIC1.49□□□□□ -2.17
COL4A4P53420 AC004467.1-201ENST00000615678 330 ntBASIC1.49□□□□□ -2.17
COL4A4P53420 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.49□□□□□ -2.17
COL4A4P53420 U6.99-201ENST00000637524 83 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms