Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 RNU6-1018P-201ENST00000516577 106 ntBASIC2.58□□□□□ -2
HMGA2P52926 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.58□□□□□ -2
HMGA2P52926 IGKV3-31-201ENST00000523109 329 ntBASIC2.58□□□□□ -2
HMGA2P52926 AC012531.5-201ENST00000611375 151 ntBASIC2.58□□□□□ -2
HMGA2P52926 IGLL4P-201ENST00000614590 133 ntBASIC2.58□□□□□ -2
HMGA2P52926 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HMGA2P52926 AC002543.1-201ENST00000299783 1954 ntBASIC2.58□□□□□ -2
HMGA2P52926 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HMGA2P52926 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.57□□□□□ -2
HMGA2P52926 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
HMGA2P52926 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HMGA2P52926 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.57□□□□□ -2
HMGA2P52926 RNU1-72P-201ENST00000362976 153 ntBASIC2.57□□□□□ -2
HMGA2P52926 RNU6-1209P-201ENST00000363655 107 ntBASIC2.57□□□□□ -2
HMGA2P52926 RNY4P6-201ENST00000363667 96 ntBASIC2.57□□□□□ -2
HMGA2P52926 RNU6-414P-201ENST00000363705 104 ntBASIC2.57□□□□□ -2
HMGA2P52926 MIR548A2-201ENST00000384956 97 ntBASIC2.57□□□□□ -2
HMGA2P52926 RNU6-644P-201ENST00000391155 98 ntBASIC2.57□□□□□ -2
HMGA2P52926 SNORA48.8-201ENST00000391324 134 ntBASIC2.57□□□□□ -2
HMGA2P52926 AL031121.1-201ENST00000406553 254 ntBASIC2.57□□□□□ -2
HMGA2P52926 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.57□□□□□ -2
HMGA2P52926 AC073261.1-201ENST00000429409 121 ntBASIC2.57□□□□□ -2
HMGA2P52926 HMGN2P9-201ENST00000476875 229 ntBASIC2.57□□□□□ -2
HMGA2P52926 AC145146.1-201ENST00000496370 254 ntBASIC2.57□□□□□ -2
HMGA2P52926 RNU6-113P-201ENST00000516653 101 ntBASIC2.57□□□□□ -2
HMGA2P52926 SCARNA13-201ENST00000516672 275 ntBASIC2.57□□□□□ -2
HMGA2P52926 AC022523.2-201ENST00000561045 150 ntBASIC2.57□□□□□ -2
HMGA2P52926 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.57□□□□□ -2
HMGA2P52926 AL159152.1-201ENST00000635019 2587 ntBASIC2.57□□□□□ -2
HMGA2P52926 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.57□□□□□ -2
HMGA2P52926 Z82195.2-201ENST00000612348 18351 ntBASIC2.57□□□□□ -2
HMGA2P52926 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.57□□□□□ -2
HMGA2P52926 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HMGA2P52926 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.57□□□□□ -2
HMGA2P52926 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HMGA2P52926 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.56□□□□□ -2
HMGA2P52926 Y_RNA.203-201ENST00000364106 102 ntBASIC2.56□□□□□ -2
HMGA2P52926 RNU6-1305P-201ENST00000364353 104 ntBASIC2.56□□□□□ -2
HMGA2P52926 SNORA63D-201ENST00000364359 132 ntBASIC2.56□□□□□ -2
HMGA2P52926 RNU6-335P-201ENST00000364563 113 ntBASIC2.56□□□□□ -2
HMGA2P52926 Y_RNA.265-201ENST00000364677 108 ntBASIC2.56□□□□□ -2
HMGA2P52926 SNORA4.2-201ENST00000365313 147 ntBASIC2.56□□□□□ -2
HMGA2P52926 RNU6-1138P-201ENST00000365359 106 ntBASIC2.56□□□□□ -2
HMGA2P52926 Y_RNA.437-201ENST00000384113 113 ntBASIC2.56□□□□□ -2
HMGA2P52926 SNORD61-201ENST00000384252 73 ntBASIC2.56□□□□□ -2
HMGA2P52926 SNORD77.3-201ENST00000391113 65 ntBASIC2.56□□□□□ -2
HMGA2P52926 RNU6-1197P-201ENST00000391183 107 ntBASIC2.56□□□□□ -2
HMGA2P52926 RNU6-402P-201ENST00000410678 103 ntBASIC2.56□□□□□ -2
HMGA2P52926 AC018634.1-201ENST00000437554 401 ntBASIC2.56□□□□□ -2
HMGA2P52926 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.56□□□□□ -2
HMGA2P52926 RNU7-171P-201ENST00000459581 62 ntBASIC2.56□□□□□ -2
HMGA2P52926 SRIP1-201ENST00000489235 288 ntBASIC2.56□□□□□ -2
HMGA2P52926 NDUFA4P2-201ENST00000489989 244 ntBASIC2.56□□□□□ -2
HMGA2P52926 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.56□□□□□ -2
HMGA2P52926 AC096725.1-201ENST00000514266 313 ntBASIC2.56□□□□□ -2
HMGA2P52926 RNA5SP309-201ENST00000516670 106 ntBASIC2.56□□□□□ -2
HMGA2P52926 AC027419.1-201ENST00000522976 328 ntBASIC2.56□□□□□ -2
HMGA2P52926 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.56□□□□□ -2
HMGA2P52926 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.56□□□□□ -2
HMGA2P52926 ZNF861P-201ENST00000588126 639 ntBASIC2.56□□□□□ -2
HMGA2P52926 SNRPGP15-201ENST00000600149 222 ntBASIC2.56□□□□□ -2
HMGA2P52926 U7.3-201ENST00000616123 62 ntBASIC2.56□□□□□ -2
HMGA2P52926 AC012531.4-201ENST00000616509 177 ntBASIC2.56□□□□□ -2
HMGA2P52926 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.56□□□□□ -2
HMGA2P52926 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
HMGA2P52926 RNY3P2-201ENST00000362918 102 ntBASIC2.55□□□□□ -2
HMGA2P52926 RNU6-1099P-201ENST00000363533 107 ntBASIC2.55□□□□□ -2
HMGA2P52926 Y_RNA.190-201ENST00000363964 101 ntBASIC2.55□□□□□ -2
HMGA2P52926 RNU6-219P-201ENST00000364728 107 ntBASIC2.55□□□□□ -2
HMGA2P52926 RNU1-133P-201ENST00000364867 167 ntBASIC2.55□□□□□ -2
HMGA2P52926 SNORD14D-201ENST00000384390 87 ntBASIC2.55□□□□□ -2
HMGA2P52926 RNU6-24P-201ENST00000384440 107 ntBASIC2.55□□□□□ -2
HMGA2P52926 MIR493-201ENST00000385254 89 ntBASIC2.55□□□□□ -2
HMGA2P52926 MIR889-201ENST00000401280 79 ntBASIC2.55□□□□□ -2
HMGA2P52926 TRIAP1P1-201ENST00000427062 225 ntBASIC2.55□□□□□ -2
HMGA2P52926 AL590383.1-201ENST00000428602 75 ntBASIC2.55□□□□□ -2
HMGA2P52926 RN7SL601P-201ENST00000471221 293 ntBASIC2.55□□□□□ -2
HMGA2P52926 RPL32P34-201ENST00000486380 400 ntBASIC2.55□□□□□ -2
HMGA2P52926 AC006445.1-201ENST00000491925 405 ntBASIC2.55□□□□□ -2
HMGA2P52926 RN7SL504P-201ENST00000494496 287 ntBASIC2.55□□□□□ -2
HMGA2P52926 AC083906.5-201ENST00000503722 328 ntBASIC2.55□□□□□ -2
HMGA2P52926 MRPS36P2-201ENST00000512569 299 ntBASIC2.55□□□□□ -2
HMGA2P52926 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.55□□□□□ -2
HMGA2P52926 SCARNA23-201ENST00000516060 130 ntBASIC2.55□□□□□ -2
HMGA2P52926 RNU6-1282P-201ENST00000516735 96 ntBASIC2.55□□□□□ -2
HMGA2P52926 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
HMGA2P52926 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.55□□□□□ -2
HMGA2P52926 YPEL5P2-201ENST00000605553 359 ntBASIC2.55□□□□□ -2
HMGA2P52926 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.55□□□□□ -2
HMGA2P52926 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.55□□□□□ -2
HMGA2P52926 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HMGA2P52926 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMGA2P52926 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMGA2P52926 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
HMGA2P52926 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.54□□□□□ -2
HMGA2P52926 SNORA33-201ENST00000363664 130 ntBASIC2.54□□□□□ -2
HMGA2P52926 RNU6-1292P-201ENST00000383856 107 ntBASIC2.54□□□□□ -2
HMGA2P52926 RNU6-242P-201ENST00000384359 107 ntBASIC2.54□□□□□ -2
HMGA2P52926 MIR548D2-201ENST00000384955 97 ntBASIC2.54□□□□□ -2
HMGA2P52926 MIR586-201ENST00000385035 97 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms