Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RNU6-290P-201ENST00000365212 101 ntBASIC1.89□□□□□ -2.11
CLCNKAP51800 RNU6-407P-201ENST00000365280 104 ntBASIC1.89□□□□□ -2.11
CLCNKAP51800 Y_RNA.361-201ENST00000365515 120 ntBASIC1.89□□□□□ -2.11
CLCNKAP51800 Y_RNA.383-201ENST00000383855 97 ntBASIC1.89□□□□□ -2.11
CLCNKAP51800 RNU6-472P-201ENST00000384299 107 ntBASIC1.89□□□□□ -2.11
CLCNKAP51800 SNORA26.9-201ENST00000391322 122 ntBASIC1.89□□□□□ -2.11
CLCNKAP51800 RNU6-1203P-201ENST00000410703 110 ntBASIC1.89□□□□□ -2.11
CLCNKAP51800 RNA5SP489-201ENST00000410986 109 ntBASIC1.89□□□□□ -2.11
CLCNKAP51800 AL445685.2-201ENST00000422551 342 ntBASIC1.89□□□□□ -2.11
CLCNKAP51800 AC099677.2-201ENST00000436385 175 ntBASIC1.89□□□□□ -2.11
CLCNKAP51800 POLR2KP2-201ENST00000438155 177 ntBASIC1.89□□□□□ -2.11
CLCNKAP51800 TRBVB-201ENST00000477100 408 ntBASIC1.89□□□□□ -2.11
CLCNKAP51800 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.89□□□□□ -2.11
CLCNKAP51800 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.89□□□□□ -2.11
CLCNKAP51800 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.89□□□□□ -2.11
CLCNKAP51800 AL161670.1-201ENST00000554348 137 ntBASIC1.89□□□□□ -2.11
CLCNKAP51800 AL353149.1-201ENST00000610667 244 ntBASIC1.89□□□□□ -2.11
CLCNKAP51800 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CLCNKAP51800 SNORA27.1-201ENST00000362604 124 ntBASIC1.88□□□□□ -2.11
CLCNKAP51800 Y_RNA.418-201ENST00000384029 102 ntBASIC1.88□□□□□ -2.11
CLCNKAP51800 RNU6-196P-201ENST00000384315 107 ntBASIC1.88□□□□□ -2.11
CLCNKAP51800 MIR873-201ENST00000401120 77 ntBASIC1.88□□□□□ -2.11
CLCNKAP51800 MIR1302-6-201ENST00000408466 90 ntBASIC1.88□□□□□ -2.11
CLCNKAP51800 RPS27P22-201ENST00000478056 241 ntBASIC1.88□□□□□ -2.11
CLCNKAP51800 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.88□□□□□ -2.11
CLCNKAP51800 MIR3684-201ENST00000579779 74 ntBASIC1.88□□□□□ -2.11
CLCNKAP51800 MIR4503-201ENST00000582187 83 ntBASIC1.88□□□□□ -2.11
CLCNKAP51800 AP001282.2-201ENST00000616149 309 ntBASIC1.88□□□□□ -2.11
CLCNKAP51800 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.88□□□□□ -2.11
CLCNKAP51800 AC127459.3-201ENST00000624328 466 ntBASIC1.88□□□□□ -2.11
CLCNKAP51800 AC010615.1-201ENST00000594254 1764 ntBASIC1.87□□□□□ -2.11
CLCNKAP51800 AL356292.1-201ENST00000283110 373 ntBASIC1.87□□□□□ -2.11
CLCNKAP51800 RNU6-505P-201ENST00000384427 107 ntBASIC1.87□□□□□ -2.11
CLCNKAP51800 SNORA8-201ENST00000384574 139 ntBASIC1.87□□□□□ -2.11
CLCNKAP51800 Y_RNA.569-201ENST00000384749 103 ntBASIC1.87□□□□□ -2.11
CLCNKAP51800 MIR583-201ENST00000384846 75 ntBASIC1.87□□□□□ -2.11
CLCNKAP51800 RNA5SP467-201ENST00000391274 118 ntBASIC1.87□□□□□ -2.11
CLCNKAP51800 MIR1302-3-201ENST00000408128 138 ntBASIC1.87□□□□□ -2.11
CLCNKAP51800 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.87□□□□□ -2.11
CLCNKAP51800 AC010409.1-201ENST00000487382 476 ntBASIC1.87□□□□□ -2.11
CLCNKAP51800 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.87□□□□□ -2.11
CLCNKAP51800 RNA5SP20-201ENST00000515976 84 ntBASIC1.87□□□□□ -2.11
CLCNKAP51800 RNU6-1146P-201ENST00000516282 102 ntBASIC1.87□□□□□ -2.11
CLCNKAP51800 RNVU1-2-201ENST00000516326 135 ntBASIC1.87□□□□□ -2.11
CLCNKAP51800 DEFB108E-201ENST00000524692 240 ntBASIC1.87□□□□□ -2.11
CLCNKAP51800 AC110588.1-201ENST00000559699 137 ntBASIC1.87□□□□□ -2.11
CLCNKAP51800 MIR4438-201ENST00000585271 93 ntBASIC1.87□□□□□ -2.11
CLCNKAP51800 AC005786.1-201ENST00000588553 154 ntBASIC1.87□□□□□ -2.11
CLCNKAP51800 MIR7843-201ENST00000622274 79 ntBASIC1.87□□□□□ -2.11
CLCNKAP51800 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.87□□□□□ -2.11
CLCNKAP51800 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
CLCNKAP51800 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.86□□□□□ -2.11
CLCNKAP51800 RNU4-80P-201ENST00000363200 141 ntBASIC1.86□□□□□ -2.11
CLCNKAP51800 RNU1-96P-201ENST00000364163 162 ntBASIC1.86□□□□□ -2.11
CLCNKAP51800 RNU6-463P-201ENST00000384340 107 ntBASIC1.86□□□□□ -2.11
CLCNKAP51800 SUMO2P12-201ENST00000405924 140 ntBASIC1.86□□□□□ -2.11
CLCNKAP51800 RNA5SP501-201ENST00000410990 112 ntBASIC1.86□□□□□ -2.11
CLCNKAP51800 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.86□□□□□ -2.11
CLCNKAP51800 snoU13.23-201ENST00000458863 104 ntBASIC1.86□□□□□ -2.11
CLCNKAP51800 RPS26P55-201ENST00000471178 356 ntBASIC1.86□□□□□ -2.11
CLCNKAP51800 RNU6-1338P-201ENST00000516328 91 ntBASIC1.86□□□□□ -2.11
CLCNKAP51800 RNU6-295P-201ENST00000516901 104 ntBASIC1.86□□□□□ -2.11
CLCNKAP51800 SCARNA24.2-201ENST00000516968 130 ntBASIC1.86□□□□□ -2.11
CLCNKAP51800 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.86□□□□□ -2.11
CLCNKAP51800 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.86□□□□□ -2.11
CLCNKAP51800 AC012493.3-201ENST00000604494 112 ntBASIC1.86□□□□□ -2.11
CLCNKAP51800 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.86□□□□□ -2.11
CLCNKAP51800 7SK.10-201ENST00000621414 298 ntBASIC1.86□□□□□ -2.11
CLCNKAP51800 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CLCNKAP51800 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CLCNKAP51800 RNU6-271P-201ENST00000363858 105 ntBASIC1.85□□□□□ -2.11
CLCNKAP51800 Y_RNA.237-201ENST00000364439 102 ntBASIC1.85□□□□□ -2.11
CLCNKAP51800 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CLCNKAP51800 SNORA40.18-201ENST00000391200 128 ntBASIC1.85□□□□□ -2.11
CLCNKAP51800 RNU6-1186P-201ENST00000410429 97 ntBASIC1.85□□□□□ -2.11
CLCNKAP51800 RNU2-61P-201ENST00000411069 191 ntBASIC1.85□□□□□ -2.11
CLCNKAP51800 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.85□□□□□ -2.11
CLCNKAP51800 SUMO1P2-201ENST00000452524 304 ntBASIC1.85□□□□□ -2.11
CLCNKAP51800 RN7SL274P-201ENST00000492268 272 ntBASIC1.85□□□□□ -2.11
CLCNKAP51800 RNU6-63P-201ENST00000516690 95 ntBASIC1.85□□□□□ -2.11
CLCNKAP51800 AL137100.2-201ENST00000555786 315 ntBASIC1.85□□□□□ -2.11
CLCNKAP51800 DEFB122-202ENST00000569013 197 ntBASIC1.85□□□□□ -2.11
CLCNKAP51800 MIR5094-201ENST00000578766 85 ntBASIC1.85□□□□□ -2.11
CLCNKAP51800 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.85□□□□□ -2.11
CLCNKAP51800 U6.73-201ENST00000619194 103 ntBASIC1.85□□□□□ -2.11
CLCNKAP51800 AC006435.5-201ENST00000624486 112 ntBASIC1.85□□□□□ -2.11
CLCNKAP51800 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.85□□□□□ -2.11
CLCNKAP51800 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.85□□□□□ -2.11
CLCNKAP51800 RNU1-22P-201ENST00000363334 158 ntBASIC1.84□□□□□ -2.11
CLCNKAP51800 Y_RNA.172-201ENST00000363765 102 ntBASIC1.84□□□□□ -2.11
CLCNKAP51800 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.84□□□□□ -2.11
CLCNKAP51800 CST2P1-201ENST00000425770 87 ntBASIC1.84□□□□□ -2.11
CLCNKAP51800 MTCO1P5-201ENST00000433573 344 ntBASIC1.84□□□□□ -2.11
CLCNKAP51800 AC003989.2-201ENST00000440224 169 ntBASIC1.84□□□□□ -2.11
CLCNKAP51800 AC097462.1-201ENST00000514125 324 ntBASIC1.84□□□□□ -2.11
CLCNKAP51800 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.84□□□□□ -2.11
CLCNKAP51800 RNU2-31P-201ENST00000516954 155 ntBASIC1.84□□□□□ -2.11
CLCNKAP51800 RNU7-128P-201ENST00000517247 62 ntBASIC1.84□□□□□ -2.11
CLCNKAP51800 RPL21P9-201ENST00000556149 474 ntBASIC1.84□□□□□ -2.11
CLCNKAP51800 MIR3149-201ENST00000584629 83 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms