Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 AC100821.1-201ENST00000523153 2479 ntBASIC1.09□□□□□ -2.23
LHX2P50458 SNORA27.1-201ENST00000362604 124 ntBASIC1.09□□□□□ -2.23
LHX2P50458 RNU1-22P-201ENST00000363334 158 ntBASIC1.09□□□□□ -2.23
LHX2P50458 RNU6-626P-201ENST00000363354 107 ntBASIC1.09□□□□□ -2.23
LHX2P50458 Y_RNA.197-201ENST00000364004 102 ntBASIC1.09□□□□□ -2.23
LHX2P50458 Y_RNA.315-201ENST00000365117 102 ntBASIC1.09□□□□□ -2.23
LHX2P50458 Y_RNA.579-201ENST00000390939 94 ntBASIC1.09□□□□□ -2.23
LHX2P50458 RNU1-78P-201ENST00000391248 165 ntBASIC1.09□□□□□ -2.23
LHX2P50458 MTCO3P19-201ENST00000415864 321 ntBASIC1.09□□□□□ -2.23
LHX2P50458 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.09□□□□□ -2.23
LHX2P50458 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.09□□□□□ -2.23
LHX2P50458 RNU7-94P-201ENST00000459576 63 ntBASIC1.09□□□□□ -2.23
LHX2P50458 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.09□□□□□ -2.23
LHX2P50458 SNORA31.10-201ENST00000516482 106 ntBASIC1.09□□□□□ -2.23
LHX2P50458 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.09□□□□□ -2.23
LHX2P50458 AC055872.1-201ENST00000570978 278 ntBASIC1.09□□□□□ -2.23
LHX2P50458 MIR4709-201ENST00000577272 72 ntBASIC1.09□□□□□ -2.23
LHX2P50458 AP001485.1-201ENST00000604799 199 ntBASIC1.09□□□□□ -2.23
LHX2P50458 AC104985.2-201ENST00000620598 500 ntBASIC1.09□□□□□ -2.23
LHX2P50458 MIR8054-201ENST00000620877 86 ntBASIC1.09□□□□□ -2.23
LHX2P50458 MIR4272-201ENST00000635924 64 ntBASIC1.09□□□□□ -2.23
LHX2P50458 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.24
LHX2P50458 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
LHX2P50458 AC018630.2-201ENST00000534866 2403 ntBASIC1.08□□□□□ -2.24
LHX2P50458 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
LHX2P50458 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.08□□□□□ -2.24
LHX2P50458 SNORD114-7-201ENST00000362520 77 ntBASIC1.08□□□□□ -2.24
LHX2P50458 Y_RNA.27-201ENST00000362540 103 ntBASIC1.08□□□□□ -2.24
LHX2P50458 RNU1-115P-201ENST00000365329 160 ntBASIC1.08□□□□□ -2.24
LHX2P50458 SNORD26-201ENST00000384147 75 ntBASIC1.08□□□□□ -2.24
LHX2P50458 RNU6-950P-201ENST00000384651 107 ntBASIC1.08□□□□□ -2.24
LHX2P50458 RNU6-440P-201ENST00000390882 105 ntBASIC1.08□□□□□ -2.24
LHX2P50458 SNORD78.2-201ENST00000391076 69 ntBASIC1.08□□□□□ -2.24
LHX2P50458 MRPL42P3-201ENST00000401492 326 ntBASIC1.08□□□□□ -2.24
LHX2P50458 MRPL35P1-201ENST00000404272 572 ntBASIC1.08□□□□□ -2.24
LHX2P50458 AC018865.2-201ENST00000423631 129 ntBASIC1.08□□□□□ -2.24
LHX2P50458 AC010154.1-201ENST00000425857 269 ntBASIC1.08□□□□□ -2.24
LHX2P50458 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.08□□□□□ -2.24
LHX2P50458 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.08□□□□□ -2.24
LHX2P50458 AC097462.1-201ENST00000514125 324 ntBASIC1.08□□□□□ -2.24
LHX2P50458 RNU6-976P-201ENST00000516086 111 ntBASIC1.08□□□□□ -2.24
LHX2P50458 RNU7-172P-201ENST00000517125 64 ntBASIC1.08□□□□□ -2.24
LHX2P50458 AC006600.1-201ENST00000572529 153 ntBASIC1.08□□□□□ -2.24
LHX2P50458 MIR4659A-201ENST00000580269 81 ntBASIC1.08□□□□□ -2.24
LHX2P50458 AL929325.1-201ENST00000603096 117 ntBASIC1.08□□□□□ -2.24
LHX2P50458 AC092447.9-201ENST00000603395 144 ntBASIC1.08□□□□□ -2.24
LHX2P50458 C8orf59P2-201ENST00000603441 271 ntBASIC1.08□□□□□ -2.24
LHX2P50458 AL133255.1-201ENST00000606374 441 ntBASIC1.08□□□□□ -2.24
LHX2P50458 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.08□□□□□ -2.24
LHX2P50458 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.08□□□□□ -2.24
LHX2P50458 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
LHX2P50458 MIR302D-201ENST00000362275 68 ntBASIC1.07□□□□□ -2.24
LHX2P50458 RNU6-271P-201ENST00000363858 105 ntBASIC1.07□□□□□ -2.24
LHX2P50458 RNU6-867P-201ENST00000364956 107 ntBASIC1.07□□□□□ -2.24
LHX2P50458 SNORD1A-201ENST00000364968 72 ntBASIC1.07□□□□□ -2.24
LHX2P50458 Y_RNA.361-201ENST00000365515 120 ntBASIC1.07□□□□□ -2.24
LHX2P50458 RNU6-20P-201ENST00000384106 107 ntBASIC1.07□□□□□ -2.24
LHX2P50458 RNU6-1031P-201ENST00000384773 107 ntBASIC1.07□□□□□ -2.24
LHX2P50458 MIR873-201ENST00000401120 77 ntBASIC1.07□□□□□ -2.24
LHX2P50458 RN7SKP200-201ENST00000410564 320 ntBASIC1.07□□□□□ -2.24
LHX2P50458 AC015922.2-201ENST00000435593 184 ntBASIC1.07□□□□□ -2.24
LHX2P50458 SUMO1P2-201ENST00000452524 304 ntBASIC1.07□□□□□ -2.24
LHX2P50458 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.07□□□□□ -2.24
LHX2P50458 RNU4-77P-201ENST00000516692 156 ntBASIC1.07□□□□□ -2.24
LHX2P50458 RNU2-12P-201ENST00000517216 168 ntBASIC1.07□□□□□ -2.24
LHX2P50458 AC023442.1-201ENST00000531247 422 ntBASIC1.07□□□□□ -2.24
LHX2P50458 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.07□□□□□ -2.24
LHX2P50458 AC011476.5-201ENST00000615594 130 ntBASIC1.07□□□□□ -2.24
LHX2P50458 AC240442.1-201ENST00000616055 283 ntBASIC1.07□□□□□ -2.24
LHX2P50458 AC091895.1-201ENST00000624494 256 ntBASIC1.07□□□□□ -2.24
LHX2P50458 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
LHX2P50458 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.06□□□□□ -2.24
LHX2P50458 Y_RNA.101-201ENST00000363154 102 ntBASIC1.06□□□□□ -2.24
LHX2P50458 RNU6-407P-201ENST00000365280 104 ntBASIC1.06□□□□□ -2.24
LHX2P50458 MIR628-201ENST00000385229 95 ntBASIC1.06□□□□□ -2.24
LHX2P50458 AC022028.1-201ENST00000412054 408 ntBASIC1.06□□□□□ -2.24
LHX2P50458 AC245047.3-201ENST00000429428 127 ntBASIC1.06□□□□□ -2.24
LHX2P50458 AL137792.2-201ENST00000443484 235 ntBASIC1.06□□□□□ -2.24
LHX2P50458 AC099513.1-201ENST00000490423 301 ntBASIC1.06□□□□□ -2.24
LHX2P50458 HMGN1P7-201ENST00000491722 313 ntBASIC1.06□□□□□ -2.24
LHX2P50458 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.06□□□□□ -2.24
LHX2P50458 Y_RNA.661-201ENST00000516003 99 ntBASIC1.06□□□□□ -2.24
LHX2P50458 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.06□□□□□ -2.24
LHX2P50458 RPL21P9-201ENST00000556149 474 ntBASIC1.06□□□□□ -2.24
LHX2P50458 MIR5188-201ENST00000583467 113 ntBASIC1.06□□□□□ -2.24
LHX2P50458 AL390123.1-201ENST00000603216 237 ntBASIC1.06□□□□□ -2.24
LHX2P50458 AL080274.1-201ENST00000605565 220 ntBASIC1.06□□□□□ -2.24
LHX2P50458 AC127459.3-201ENST00000624328 466 ntBASIC1.06□□□□□ -2.24
LHX2P50458 AL606534.2-204ENST00000635008 178 ntBASIC1.06□□□□□ -2.24
LHX2P50458 MIR6079-201ENST00000635807 62 ntBASIC1.06□□□□□ -2.24
LHX2P50458 U6.92-201ENST00000636464 89 ntBASIC1.06□□□□□ -2.24
LHX2P50458 ICE2P2-201ENST00000483823 2787 ntBASIC1.06□□□□□ -2.24
LHX2P50458 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
LHX2P50458 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.05□□□□□ -2.24
LHX2P50458 AC091812.1-201ENST00000432235 1948 ntBASIC1.05□□□□□ -2.24
LHX2P50458 Y_RNA.39-201ENST00000362620 98 ntBASIC1.05□□□□□ -2.24
LHX2P50458 Y_RNA.80-201ENST00000362996 102 ntBASIC1.05□□□□□ -2.24
LHX2P50458 Y_RNA.112-201ENST00000363250 102 ntBASIC1.05□□□□□ -2.24
LHX2P50458 Y_RNA.124-201ENST00000363339 93 ntBASIC1.05□□□□□ -2.24
LHX2P50458 SNORD115-30-201ENST00000364117 82 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms