Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 AL162424.1-201ENST00000602325 221 ntBASIC1.52□□□□□ -2.17
LIG4P49917 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.51□□□□□ -2.17
LIG4P49917 WWP1P1-201ENST00000466609 2769 ntBASIC1.51□□□□□ -2.17
LIG4P49917 Y_RNA.27-201ENST00000362540 103 ntBASIC1.51□□□□□ -2.17
LIG4P49917 SNORD115-30-201ENST00000364117 82 ntBASIC1.51□□□□□ -2.17
LIG4P49917 Y_RNA.267-201ENST00000364679 109 ntBASIC1.51□□□□□ -2.17
LIG4P49917 RNU6-117P-201ENST00000365415 107 ntBASIC1.51□□□□□ -2.17
LIG4P49917 AP1B1P2-201ENST00000416196 106 ntBASIC1.51□□□□□ -2.17
LIG4P49917 AF228730.4-201ENST00000421457 183 ntBASIC1.51□□□□□ -2.17
LIG4P49917 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.51□□□□□ -2.17
LIG4P49917 RNU1-98P-201ENST00000458992 160 ntBASIC1.51□□□□□ -2.17
LIG4P49917 SUMO2P16-201ENST00000519475 264 ntBASIC1.51□□□□□ -2.17
LIG4P49917 MIR4421-201ENST00000578133 69 ntBASIC1.51□□□□□ -2.17
LIG4P49917 AC091178.2-201ENST00000584401 117 ntBASIC1.51□□□□□ -2.17
LIG4P49917 AC005176.2-201ENST00000596933 147 ntBASIC1.51□□□□□ -2.17
LIG4P49917 AC006380.1-201ENST00000603598 186 ntBASIC1.51□□□□□ -2.17
LIG4P49917 AL365434.2-201ENST00000607979 234 ntBASIC1.51□□□□□ -2.17
LIG4P49917 AL121890.5-201ENST00000620848 304 ntBASIC1.51□□□□□ -2.17
LIG4P49917 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.51□□□□□ -2.17
LIG4P49917 MIR4272-201ENST00000635924 64 ntBASIC1.51□□□□□ -2.17
LIG4P49917 U6.92-201ENST00000636464 89 ntBASIC1.51□□□□□ -2.17
LIG4P49917 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LIG4P49917 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
LIG4P49917 SNORD114-7-201ENST00000362520 77 ntBASIC1.5□□□□□ -2.17
LIG4P49917 Y_RNA.101-201ENST00000363154 102 ntBASIC1.5□□□□□ -2.17
LIG4P49917 RNU4-73P-201ENST00000363164 141 ntBASIC1.5□□□□□ -2.17
LIG4P49917 RNU6-626P-201ENST00000363354 107 ntBASIC1.5□□□□□ -2.17
LIG4P49917 Y_RNA.361-201ENST00000365515 120 ntBASIC1.5□□□□□ -2.17
LIG4P49917 RNU6-20P-201ENST00000384106 107 ntBASIC1.5□□□□□ -2.17
LIG4P49917 Y_RNA.496-201ENST00000384444 101 ntBASIC1.5□□□□□ -2.17
LIG4P49917 RNU6-1065P-201ENST00000384513 106 ntBASIC1.5□□□□□ -2.17
LIG4P49917 MIR562-201ENST00000384894 95 ntBASIC1.5□□□□□ -2.17
LIG4P49917 RN7SKP51-201ENST00000410781 304 ntBASIC1.5□□□□□ -2.17
LIG4P49917 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.5□□□□□ -2.17
LIG4P49917 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.5□□□□□ -2.17
LIG4P49917 Y_RNA.661-201ENST00000516003 99 ntBASIC1.5□□□□□ -2.17
LIG4P49917 RNU6-341P-201ENST00000516973 96 ntBASIC1.5□□□□□ -2.17
LIG4P49917 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.5□□□□□ -2.17
LIG4P49917 MIR4795-201ENST00000584182 89 ntBASIC1.5□□□□□ -2.17
LIG4P49917 SNORA28-201ENST00000606769 126 ntBASIC1.5□□□□□ -2.17
LIG4P49917 AC073349.3-201ENST00000617616 186 ntBASIC1.5□□□□□ -2.17
LIG4P49917 AC104985.2-201ENST00000620598 500 ntBASIC1.5□□□□□ -2.17
LIG4P49917 AC091925.1-201ENST00000623204 462 ntBASIC1.5□□□□□ -2.17
LIG4P49917 MT-TD-201ENST00000387419 68 ntBASIC1.49□□□□□ -2.17
LIG4P49917 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.49□□□□□ -2.17
LIG4P49917 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.49□□□□□ -2.17
LIG4P49917 SNX2P2-201ENST00000424553 323 ntBASIC1.49□□□□□ -2.17
LIG4P49917 AL135790.2-201ENST00000437701 267 ntBASIC1.49□□□□□ -2.17
LIG4P49917 MTATP6P23-201ENST00000440153 476 ntBASIC1.49□□□□□ -2.17
LIG4P49917 RNU6-1291P-201ENST00000516591 104 ntBASIC1.49□□□□□ -2.17
LIG4P49917 RNU2-56P-201ENST00000516826 190 ntBASIC1.49□□□□□ -2.17
LIG4P49917 AC092447.9-201ENST00000603395 144 ntBASIC1.49□□□□□ -2.17
LIG4P49917 AL078604.3-201ENST00000615580 211 ntBASIC1.49□□□□□ -2.17
LIG4P49917 AC240442.1-201ENST00000616055 283 ntBASIC1.49□□□□□ -2.17
LIG4P49917 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.49□□□□□ -2.17
LIG4P49917 AL513423.1-201ENST00000621695 132 ntBASIC1.49□□□□□ -2.17
LIG4P49917 SNORA7.1-201ENST00000363750 139 ntBASIC1.48□□□□□ -2.17
LIG4P49917 Y_RNA.252-201ENST00000364556 101 ntBASIC1.48□□□□□ -2.17
LIG4P49917 Y_RNA.265-201ENST00000364677 108 ntBASIC1.48□□□□□ -2.17
LIG4P49917 RNU6-136P-201ENST00000384663 107 ntBASIC1.48□□□□□ -2.17
LIG4P49917 RNU2-54P-201ENST00000410299 190 ntBASIC1.48□□□□□ -2.17
LIG4P49917 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
LIG4P49917 AL603825.1-201ENST00000438481 80 ntBASIC1.48□□□□□ -2.17
LIG4P49917 RNA5SP61-201ENST00000516453 100 ntBASIC1.48□□□□□ -2.17
LIG4P49917 RNU6-63P-201ENST00000516690 95 ntBASIC1.48□□□□□ -2.17
LIG4P49917 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.48□□□□□ -2.17
LIG4P49917 AP002004.2-201ENST00000531656 154 ntBASIC1.48□□□□□ -2.17
LIG4P49917 SNORD3E-202ENST00000627253 216 ntBASIC1.48□□□□□ -2.17
LIG4P49917 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.48□□□□□ -2.17
LIG4P49917 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
LIG4P49917 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
LIG4P49917 Y_RNA.5-201ENST00000362334 102 ntBASIC1.47□□□□□ -2.17
LIG4P49917 SNORA1B-201ENST00000362535 133 ntBASIC1.47□□□□□ -2.17
LIG4P49917 Y_RNA.39-201ENST00000362620 98 ntBASIC1.47□□□□□ -2.17
LIG4P49917 RNU4-79P-201ENST00000362764 141 ntBASIC1.47□□□□□ -2.17
LIG4P49917 RNU6-505P-201ENST00000384427 107 ntBASIC1.47□□□□□ -2.17
LIG4P49917 AL031003.1-201ENST00000404229 172 ntBASIC1.47□□□□□ -2.17
LIG4P49917 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.47□□□□□ -2.17
LIG4P49917 RNU5A-5P-201ENST00000411054 116 ntBASIC1.47□□□□□ -2.17
LIG4P49917 SDAD1P3-201ENST00000427380 333 ntBASIC1.47□□□□□ -2.17
LIG4P49917 SNORA70.12-201ENST00000516084 153 ntBASIC1.47□□□□□ -2.17
LIG4P49917 RNU6-976P-201ENST00000516086 111 ntBASIC1.47□□□□□ -2.17
LIG4P49917 Y_RNA.315-201ENST00000365117 102 ntBASIC1.46□□□□□ -2.18
LIG4P49917 MIR520G-201ENST00000385064 90 ntBASIC1.46□□□□□ -2.18
LIG4P49917 MIR660-201ENST00000385235 97 ntBASIC1.46□□□□□ -2.18
LIG4P49917 Y_RNA.579-201ENST00000390939 94 ntBASIC1.46□□□□□ -2.18
LIG4P49917 RNU1-123P-201ENST00000458950 160 ntBASIC1.46□□□□□ -2.18
LIG4P49917 RNU6-155P-201ENST00000516347 100 ntBASIC1.46□□□□□ -2.18
LIG4P49917 RNU7-28P-201ENST00000516759 62 ntBASIC1.46□□□□□ -2.18
LIG4P49917 PRR13P7-201ENST00000605538 430 ntBASIC1.46□□□□□ -2.18
LIG4P49917 LARP7P1-201ENST00000605576 316 ntBASIC1.46□□□□□ -2.18
LIG4P49917 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.46□□□□□ -2.18
LIG4P49917 RNU1-115P-201ENST00000365329 160 ntBASIC1.45□□□□□ -2.18
LIG4P49917 Y_RNA.446-201ENST00000384178 104 ntBASIC1.45□□□□□ -2.18
LIG4P49917 RNU6-1199P-201ENST00000411249 104 ntBASIC1.45□□□□□ -2.18
LIG4P49917 MTND4LP11-201ENST00000422184 280 ntBASIC1.45□□□□□ -2.18
LIG4P49917 AC233266.1-201ENST00000454518 96 ntBASIC1.45□□□□□ -2.18
LIG4P49917 OR9P1P-201ENST00000496431 281 ntBASIC1.45□□□□□ -2.18
LIG4P49917 RNU6-1337P-201ENST00000516525 95 ntBASIC1.45□□□□□ -2.18
LIG4P49917 RNA5SP168-201ENST00000516642 112 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms