Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 U6.115-201ENST00000636045 103 ntBASIC0.89□□□□□ -2.27
CASP4P49662 MIR3674-201ENST00000636576 68 ntBASIC0.89□□□□□ -2.27
CASP4P49662 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.89□□□□□ -2.27
CASP4P49662 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CASP4P49662 SNORD114-7-201ENST00000362520 77 ntBASIC0.88□□□□□ -2.27
CASP4P49662 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
CASP4P49662 Y_RNA.482-201ENST00000384377 111 ntBASIC0.88□□□□□ -2.27
CASP4P49662 RNU5A-5P-201ENST00000411054 116 ntBASIC0.88□□□□□ -2.27
CASP4P49662 POLR2J4-204ENST00000418424 324 ntBASIC0.88□□□□□ -2.27
CASP4P49662 AC011352.1-201ENST00000512300 793 ntBASIC0.88□□□□□ -2.27
CASP4P49662 SNORA40.9-201ENST00000515895 93 ntBASIC0.88□□□□□ -2.27
CASP4P49662 RNU6-351P-201ENST00000516097 100 ntBASIC0.88□□□□□ -2.27
CASP4P49662 AC022868.1-201ENST00000517767 391 ntBASIC0.88□□□□□ -2.27
CASP4P49662 DEFB108E-201ENST00000524692 240 ntBASIC0.88□□□□□ -2.27
CASP4P49662 AL358944.1-201ENST00000528537 144 ntBASIC0.88□□□□□ -2.27
CASP4P49662 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.88□□□□□ -2.27
CASP4P49662 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.88□□□□□ -2.27
CASP4P49662 AC127459.3-201ENST00000624328 466 ntBASIC0.88□□□□□ -2.27
CASP4P49662 Y_RNA.72-201ENST00000362894 103 ntBASIC0.87□□□□□ -2.27
CASP4P49662 Y_RNA.339-201ENST00000365325 102 ntBASIC0.87□□□□□ -2.27
CASP4P49662 RNU6-117P-201ENST00000365415 107 ntBASIC0.87□□□□□ -2.27
CASP4P49662 Y_RNA.358-201ENST00000365491 99 ntBASIC0.87□□□□□ -2.27
CASP4P49662 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.87□□□□□ -2.27
CASP4P49662 RNA5SP475-201ENST00000410568 110 ntBASIC0.87□□□□□ -2.27
CASP4P49662 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.87□□□□□ -2.27
CASP4P49662 U8.22-201ENST00000459141 133 ntBASIC0.87□□□□□ -2.27
CASP4P49662 AC116353.2-201ENST00000505332 712 ntBASIC0.87□□□□□ -2.27
CASP4P49662 RNU7-12P-201ENST00000516030 62 ntBASIC0.87□□□□□ -2.27
CASP4P49662 RNU6-947P-201ENST00000516264 106 ntBASIC0.87□□□□□ -2.27
CASP4P49662 RNU6-1291P-201ENST00000516591 104 ntBASIC0.87□□□□□ -2.27
CASP4P49662 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.87□□□□□ -2.27
CASP4P49662 AC060780.3-201ENST00000589464 80 ntBASIC0.87□□□□□ -2.27
CASP4P49662 AC005592.1-201ENST00000566527 1640 ntBASIC0.86□□□□□ -2.27
CASP4P49662 SNORD114-24-201ENST00000365029 72 ntBASIC0.86□□□□□ -2.27
CASP4P49662 RNU6-1310P-201ENST00000384153 107 ntBASIC0.86□□□□□ -2.27
CASP4P49662 RNU6-318P-201ENST00000384283 103 ntBASIC0.86□□□□□ -2.27
CASP4P49662 SNORA80D-201ENST00000384488 135 ntBASIC0.86□□□□□ -2.27
CASP4P49662 MIR200A-201ENST00000384875 90 ntBASIC0.86□□□□□ -2.27
CASP4P49662 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.86□□□□□ -2.27
CASP4P49662 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.86□□□□□ -2.27
CASP4P49662 AC092423.1-201ENST00000430165 186 ntBASIC0.86□□□□□ -2.27
CASP4P49662 MTND3P10-201ENST00000450967 341 ntBASIC0.86□□□□□ -2.27
CASP4P49662 RPL7P42-201ENST00000481005 679 ntBASIC0.86□□□□□ -2.27
CASP4P49662 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.86□□□□□ -2.27
CASP4P49662 Y_RNA.655-201ENST00000515919 96 ntBASIC0.86□□□□□ -2.27
CASP4P49662 SNORD79.1-201ENST00000516069 84 ntBASIC0.86□□□□□ -2.27
CASP4P49662 MIR2355-201ENST00000517199 87 ntBASIC0.86□□□□□ -2.27
CASP4P49662 AP002001.1-203ENST00000534002 267 ntBASIC0.86□□□□□ -2.27
CASP4P49662 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.86□□□□□ -2.27
CASP4P49662 AC080078.2-201ENST00000603766 501 ntBASIC0.86□□□□□ -2.27
CASP4P49662 AC211469.2-201ENST00000605461 205 ntBASIC0.86□□□□□ -2.27
CASP4P49662 AC007014.2-201ENST00000615581 479 ntBASIC0.86□□□□□ -2.27
CASP4P49662 PISRT1.1-201ENST00000616930 107 ntBASIC0.86□□□□□ -2.27
CASP4P49662 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.86□□□□□ -2.27
CASP4P49662 MIRLET7C-201ENST00000362160 84 ntBASIC0.85□□□□□ -2.27
CASP4P49662 Y_RNA.88-201ENST00000363029 99 ntBASIC0.85□□□□□ -2.27
CASP4P49662 RNU6-454P-201ENST00000364292 107 ntBASIC0.85□□□□□ -2.27
CASP4P49662 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.85□□□□□ -2.27
CASP4P49662 AC093850.1-201ENST00000454121 251 ntBASIC0.85□□□□□ -2.27
CASP4P49662 AL049830.1-201ENST00000468034 425 ntBASIC0.85□□□□□ -2.27
CASP4P49662 RPL17P19-201ENST00000489069 552 ntBASIC0.85□□□□□ -2.27
CASP4P49662 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.85□□□□□ -2.27
CASP4P49662 FAM106DP-201ENST00000586416 501 ntBASIC0.85□□□□□ -2.27
CASP4P49662 AC011712.1-201ENST00000588959 234 ntBASIC0.85□□□□□ -2.27
CASP4P49662 MIR6504-201ENST00000613520 61 ntBASIC0.85□□□□□ -2.27
CASP4P49662 AC092794.2-201ENST00000620933 563 ntBASIC0.85□□□□□ -2.27
CASP4P49662 AC073869.6-201ENST00000640656 341 ntBASIC0.85□□□□□ -2.27
CASP4P49662 Y_RNA.124-201ENST00000363339 93 ntBASIC0.84□□□□□ -2.27
CASP4P49662 Y_RNA.243-201ENST00000364481 109 ntBASIC0.84□□□□□ -2.27
CASP4P49662 RNU1-36P-201ENST00000365130 165 ntBASIC0.84□□□□□ -2.27
CASP4P49662 Y_RNA.404-201ENST00000383978 102 ntBASIC0.84□□□□□ -2.27
CASP4P49662 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.84□□□□□ -2.27
CASP4P49662 AC002429.1-201ENST00000437672 148 ntBASIC0.84□□□□□ -2.27
CASP4P49662 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.84□□□□□ -2.27
CASP4P49662 LINC01399-202ENST00000458450 244 ntBASIC0.84□□□□□ -2.27
CASP4P49662 RPS29P1-201ENST00000465274 159 ntBASIC0.84□□□□□ -2.27
CASP4P49662 RNU6-358P-201ENST00000516564 75 ntBASIC0.84□□□□□ -2.27
CASP4P49662 RNU6-1096P-201ENST00000517089 102 ntBASIC0.84□□□□□ -2.27
CASP4P49662 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.84□□□□□ -2.27
CASP4P49662 AL117336.2-201ENST00000602435 335 ntBASIC0.84□□□□□ -2.27
CASP4P49662 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
CASP4P49662 SNORD12B-201ENST00000410433 91 ntBASIC0.83□□□□□ -2.28
CASP4P49662 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.83□□□□□ -2.28
CASP4P49662 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.83□□□□□ -2.28
CASP4P49662 AC233266.1-201ENST00000454518 96 ntBASIC0.83□□□□□ -2.28
CASP4P49662 SCARNA16.2-201ENST00000516520 172 ntBASIC0.83□□□□□ -2.28
CASP4P49662 AC068790.6-201ENST00000602558 258 ntBASIC0.83□□□□□ -2.28
CASP4P49662 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
CASP4P49662 AL020996.3-201ENST00000606617 222 ntBASIC0.83□□□□□ -2.28
CASP4P49662 AC242852.1-201ENST00000612151 96 ntBASIC0.83□□□□□ -2.28
CASP4P49662 AC244015.1-201ENST00000622301 99 ntBASIC0.83□□□□□ -2.28
CASP4P49662 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
CASP4P49662 RNU6-1301P-201ENST00000362724 104 ntBASIC0.82□□□□□ -2.28
CASP4P49662 RNU6-833P-201ENST00000363486 107 ntBASIC0.82□□□□□ -2.28
CASP4P49662 RNU4-41P-201ENST00000364426 143 ntBASIC0.82□□□□□ -2.28
CASP4P49662 SNORA25.9-201ENST00000365087 128 ntBASIC0.82□□□□□ -2.28
CASP4P49662 Y_RNA.361-201ENST00000365515 120 ntBASIC0.82□□□□□ -2.28
CASP4P49662 MIR891A-201ENST00000401237 79 ntBASIC0.82□□□□□ -2.28
CASP4P49662 AC114482.1-201ENST00000418010 247 ntBASIC0.82□□□□□ -2.28
CASP4P49662 RPL23AP50-201ENST00000434149 455 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 235.6 ms