Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC012640.5-201ENST00000623897 319 ntBASIC2.07□□□□□ -2.08
SOX2P48431 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
SOX2P48431 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.06□□□□□ -2.08
SOX2P48431 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SOX2P48431 AL596028.1-201ENST00000326971 197 ntBASIC2.06□□□□□ -2.08
SOX2P48431 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SOX2P48431 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.06□□□□□ -2.08
SOX2P48431 RNU6-1323P-201ENST00000384025 107 ntBASIC2.06□□□□□ -2.08
SOX2P48431 RNA5SP323-201ENST00000391094 133 ntBASIC2.06□□□□□ -2.08
SOX2P48431 RNA5SP467-201ENST00000391274 118 ntBASIC2.06□□□□□ -2.08
SOX2P48431 AL117342.1-201ENST00000404861 406 ntBASIC2.06□□□□□ -2.08
SOX2P48431 AL355497.1-201ENST00000406262 551 ntBASIC2.06□□□□□ -2.08
SOX2P48431 RNA5SP511-201ENST00000410487 115 ntBASIC2.06□□□□□ -2.08
SOX2P48431 RNA5SP270-201ENST00000411361 118 ntBASIC2.06□□□□□ -2.08
SOX2P48431 AL135786.1-201ENST00000415892 214 ntBASIC2.06□□□□□ -2.08
SOX2P48431 EBAG9P1-201ENST00000418955 543 ntBASIC2.06□□□□□ -2.08
SOX2P48431 CST2P1-201ENST00000425770 87 ntBASIC2.06□□□□□ -2.08
SOX2P48431 AL162725.1-201ENST00000435405 301 ntBASIC2.06□□□□□ -2.08
SOX2P48431 AC018634.1-201ENST00000437554 401 ntBASIC2.06□□□□□ -2.08
SOX2P48431 AC107083.1-201ENST00000439643 279 ntBASIC2.06□□□□□ -2.08
SOX2P48431 Z98949.2-201ENST00000440996 144 ntBASIC2.06□□□□□ -2.08
SOX2P48431 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.06□□□□□ -2.08
SOX2P48431 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.06□□□□□ -2.08
SOX2P48431 RNU7-99P-201ENST00000516271 62 ntBASIC2.06□□□□□ -2.08
SOX2P48431 RNU1-142P-201ENST00000516682 145 ntBASIC2.06□□□□□ -2.08
SOX2P48431 RNU7-116P-201ENST00000516940 62 ntBASIC2.06□□□□□ -2.08
SOX2P48431 IGLV3-17-201ENST00000519099 244 ntBASIC2.06□□□□□ -2.08
SOX2P48431 AC005786.1-201ENST00000588553 154 ntBASIC2.06□□□□□ -2.08
SOX2P48431 Z83818.1-201ENST00000603584 150 ntBASIC2.06□□□□□ -2.08
SOX2P48431 MIR548AY-201ENST00000617669 107 ntBASIC2.06□□□□□ -2.08
SOX2P48431 AL365265.1-201ENST00000621045 234 ntBASIC2.06□□□□□ -2.08
SOX2P48431 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SOX2P48431 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SOX2P48431 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SOX2P48431 Y_RNA.29-201ENST00000362570 113 ntBASIC2.05□□□□□ -2.08
SOX2P48431 RNU6-862P-201ENST00000362804 105 ntBASIC2.05□□□□□ -2.08
SOX2P48431 RNU6-1205P-201ENST00000363625 106 ntBASIC2.05□□□□□ -2.08
SOX2P48431 U8.7-201ENST00000364940 136 ntBASIC2.05□□□□□ -2.08
SOX2P48431 Y_RNA.785-201ENST00000384290 109 ntBASIC2.05□□□□□ -2.08
SOX2P48431 RNU6-136P-201ENST00000384663 107 ntBASIC2.05□□□□□ -2.08
SOX2P48431 RNU11-3P-201ENST00000391111 133 ntBASIC2.05□□□□□ -2.08
SOX2P48431 SNORA11.4-201ENST00000408823 129 ntBASIC2.05□□□□□ -2.08
SOX2P48431 AC117454.1-201ENST00000491120 168 ntBASIC2.05□□□□□ -2.08
SOX2P48431 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.05□□□□□ -2.08
SOX2P48431 AC026436.1-201ENST00000510537 270 ntBASIC2.05□□□□□ -2.08
SOX2P48431 RNU7-115P-201ENST00000516433 55 ntBASIC2.05□□□□□ -2.08
SOX2P48431 AC024405.2-202ENST00000532731 184 ntBASIC2.05□□□□□ -2.08
SOX2P48431 AC121758.2-201ENST00000553271 193 ntBASIC2.05□□□□□ -2.08
SOX2P48431 GTF3AP2-201ENST00000557014 266 ntBASIC2.05□□□□□ -2.08
SOX2P48431 AC015720.1-201ENST00000565251 277 ntBASIC2.05□□□□□ -2.08
SOX2P48431 LARP7P3-201ENST00000579888 337 ntBASIC2.05□□□□□ -2.08
SOX2P48431 AC073413.2-201ENST00000604332 360 ntBASIC2.05□□□□□ -2.08
SOX2P48431 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.05□□□□□ -2.08
SOX2P48431 AC006386.2-201ENST00000624491 75 ntBASIC2.05□□□□□ -2.08
SOX2P48431 AC012005.1-201ENST00000624575 75 ntBASIC2.05□□□□□ -2.08
SOX2P48431 MIR203B-201ENST00000636080 86 ntBASIC2.05□□□□□ -2.08
SOX2P48431 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.05□□□□□ -2.08
SOX2P48431 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.04□□□□□ -2.08
SOX2P48431 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SOX2P48431 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SOX2P48431 Y_RNA.293-201ENST00000364908 93 ntBASIC2.04□□□□□ -2.08
SOX2P48431 RNU6-144P-201ENST00000383951 107 ntBASIC2.04□□□□□ -2.08
SOX2P48431 SNORA6-201ENST00000384033 151 ntBASIC2.04□□□□□ -2.08
SOX2P48431 SNORA80E-201ENST00000384744 137 ntBASIC2.04□□□□□ -2.08
SOX2P48431 MIR518A2-201ENST00000384966 87 ntBASIC2.04□□□□□ -2.08
SOX2P48431 RNA5SP465-201ENST00000391195 109 ntBASIC2.04□□□□□ -2.08
SOX2P48431 HMGN2P39-201ENST00000398005 273 ntBASIC2.04□□□□□ -2.08
SOX2P48431 Y_RNA.793-201ENST00000411222 111 ntBASIC2.04□□□□□ -2.08
SOX2P48431 Y_RNA.644-201ENST00000459006 113 ntBASIC2.04□□□□□ -2.08
SOX2P48431 Y_RNA.674-201ENST00000516362 113 ntBASIC2.04□□□□□ -2.08
SOX2P48431 RNU6-182P-201ENST00000516970 105 ntBASIC2.04□□□□□ -2.08
SOX2P48431 SNORA81.3-201ENST00000517283 198 ntBASIC2.04□□□□□ -2.08
SOX2P48431 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.04□□□□□ -2.08
SOX2P48431 AC024995.1-201ENST00000523014 93 ntBASIC2.04□□□□□ -2.08
SOX2P48431 ZNF720P1-201ENST00000562403 1939 ntBASIC2.04□□□□□ -2.08
SOX2P48431 POLR3GP1-201ENST00000594073 261 ntBASIC2.04□□□□□ -2.08
SOX2P48431 AP003357.1-201ENST00000604497 148 ntBASIC2.04□□□□□ -2.08
SOX2P48431 AL033523.1-201ENST00000605153 153 ntBASIC2.04□□□□□ -2.08
SOX2P48431 MIR1291-201ENST00000627649 87 ntBASIC2.04□□□□□ -2.08
SOX2P48431 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.04□□□□□ -2.08
SOX2P48431 SNORA8-201ENST00000384574 139 ntBASIC2.03□□□□□ -2.08
SOX2P48431 MIR196B-201ENST00000384852 84 ntBASIC2.03□□□□□ -2.08
SOX2P48431 AL359511.1-201ENST00000402970 211 ntBASIC2.03□□□□□ -2.08
SOX2P48431 COTL1P1-201ENST00000422309 375 ntBASIC2.03□□□□□ -2.08
SOX2P48431 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.03□□□□□ -2.08
SOX2P48431 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.03□□□□□ -2.08
SOX2P48431 AC021269.2-201ENST00000532318 330 ntBASIC2.03□□□□□ -2.08
SOX2P48431 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.03□□□□□ -2.08
SOX2P48431 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.03□□□□□ -2.08
SOX2P48431 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.03□□□□□ -2.08
SOX2P48431 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SOX2P48431 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.03□□□□□ -2.08
SOX2P48431 ZNF658B-202ENST00000615961 3375 ntBASIC2.03□□□□□ -2.08
SOX2P48431 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SOX2P48431 RNU6-653P-201ENST00000363074 106 ntBASIC2.02□□□□□ -2.09
SOX2P48431 SNORA33-201ENST00000363664 130 ntBASIC2.02□□□□□ -2.09
SOX2P48431 RNU6-1020P-201ENST00000363684 107 ntBASIC2.02□□□□□ -2.09
SOX2P48431 Y_RNA.308-201ENST00000365043 101 ntBASIC2.02□□□□□ -2.09
SOX2P48431 Y_RNA.500-201ENST00000384466 111 ntBASIC2.02□□□□□ -2.09
SOX2P48431 MIR597-201ENST00000384968 97 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms