Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
BRCC3P46736 MIR424-201ENST00000362227 98 ntBASIC1.42□□□□□ -2.18
BRCC3P46736 Y_RNA.124-201ENST00000363339 93 ntBASIC1.42□□□□□ -2.18
BRCC3P46736 SNORA72.2-201ENST00000365028 127 ntBASIC1.42□□□□□ -2.18
BRCC3P46736 RNU6-53P-201ENST00000365367 106 ntBASIC1.42□□□□□ -2.18
BRCC3P46736 RNU6-203P-201ENST00000384038 104 ntBASIC1.42□□□□□ -2.18
BRCC3P46736 Y_RNA.445-201ENST00000384168 102 ntBASIC1.42□□□□□ -2.18
BRCC3P46736 MIR628-201ENST00000385229 95 ntBASIC1.42□□□□□ -2.18
BRCC3P46736 RNA5SP109-201ENST00000391010 116 ntBASIC1.42□□□□□ -2.18
BRCC3P46736 AL354751.2-201ENST00000415471 210 ntBASIC1.42□□□□□ -2.18
BRCC3P46736 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.42□□□□□ -2.18
BRCC3P46736 AC008134.1-201ENST00000420943 193 ntBASIC1.42□□□□□ -2.18
BRCC3P46736 AC073910.1-201ENST00000445047 438 ntBASIC1.42□□□□□ -2.18
BRCC3P46736 RPS27P1-201ENST00000450552 247 ntBASIC1.42□□□□□ -2.18
BRCC3P46736 RNU6-1146P-201ENST00000516282 102 ntBASIC1.42□□□□□ -2.18
BRCC3P46736 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.42□□□□□ -2.18
BRCC3P46736 SNORA77B-201ENST00000578179 125 ntBASIC1.42□□□□□ -2.18
BRCC3P46736 PART1_1.1-201ENST00000611761 217 ntBASIC1.42□□□□□ -2.18
BRCC3P46736 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
BRCC3P46736 Y_RNA.39-201ENST00000362620 98 ntBASIC1.41□□□□□ -2.18
BRCC3P46736 Y_RNA.226-201ENST00000364337 114 ntBASIC1.41□□□□□ -2.18
BRCC3P46736 SNORA22B-201ENST00000383876 138 ntBASIC1.41□□□□□ -2.18
BRCC3P46736 SNORD78.2-201ENST00000391076 69 ntBASIC1.41□□□□□ -2.18
BRCC3P46736 RNU6-1186P-201ENST00000410429 97 ntBASIC1.41□□□□□ -2.18
BRCC3P46736 RNA5SP475-201ENST00000410568 110 ntBASIC1.41□□□□□ -2.18
BRCC3P46736 RNU2-7P-201ENST00000410794 178 ntBASIC1.41□□□□□ -2.18
BRCC3P46736 FCF1P4-201ENST00000448326 183 ntBASIC1.41□□□□□ -2.18
BRCC3P46736 AC010598.1-201ENST00000510378 103 ntBASIC1.41□□□□□ -2.18
BRCC3P46736 Y_RNA.701-201ENST00000516812 110 ntBASIC1.41□□□□□ -2.18
BRCC3P46736 RNU2-12P-201ENST00000517216 168 ntBASIC1.41□□□□□ -2.18
BRCC3P46736 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
BRCC3P46736 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.41□□□□□ -2.18
BRCC3P46736 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.41□□□□□ -2.18
BRCC3P46736 AC022217.4-201ENST00000604389 163 ntBASIC1.41□□□□□ -2.18
BRCC3P46736 AC016925.2-201ENST00000605108 242 ntBASIC1.41□□□□□ -2.18
BRCC3P46736 AC005828.6-201ENST00000606610 232 ntBASIC1.41□□□□□ -2.18
BRCC3P46736 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.41□□□□□ -2.18
BRCC3P46736 AC095038.3-201ENST00000634439 195 ntBASIC1.41□□□□□ -2.18
BRCC3P46736 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
BRCC3P46736 Y_RNA.28-201ENST00000362554 111 ntBASIC1.4□□□□□ -2.19
BRCC3P46736 Y_RNA.243-201ENST00000364481 109 ntBASIC1.4□□□□□ -2.19
BRCC3P46736 RNU1-78P-201ENST00000391248 165 ntBASIC1.4□□□□□ -2.19
BRCC3P46736 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.4□□□□□ -2.19
BRCC3P46736 MTCO2P12-201ENST00000427426 682 ntBASIC1.4□□□□□ -2.19
BRCC3P46736 HSPE1P9-201ENST00000440046 311 ntBASIC1.4□□□□□ -2.19
BRCC3P46736 JTBP1-201ENST00000441314 247 ntBASIC1.4□□□□□ -2.19
BRCC3P46736 RPS29P29-201ENST00000456396 171 ntBASIC1.4□□□□□ -2.19
BRCC3P46736 Y_RNA.631-201ENST00000459607 101 ntBASIC1.4□□□□□ -2.19
BRCC3P46736 SNORA40.14-201ENST00000516543 86 ntBASIC1.4□□□□□ -2.19
BRCC3P46736 Y_RNA.711-201ENST00000516993 102 ntBASIC1.4□□□□□ -2.19
BRCC3P46736 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.4□□□□□ -2.19
BRCC3P46736 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.4□□□□□ -2.19
BRCC3P46736 AC024995.1-201ENST00000523014 93 ntBASIC1.4□□□□□ -2.19
BRCC3P46736 AC040926.1-201ENST00000530195 238 ntBASIC1.4□□□□□ -2.19
BRCC3P46736 MIR3171-201ENST00000584270 74 ntBASIC1.4□□□□□ -2.19
BRCC3P46736 MIR3660-201ENST00000584845 100 ntBASIC1.4□□□□□ -2.19
BRCC3P46736 MIR4438-201ENST00000585271 93 ntBASIC1.4□□□□□ -2.19
BRCC3P46736 AC022432.1-201ENST00000595739 310 ntBASIC1.4□□□□□ -2.19
BRCC3P46736 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
BRCC3P46736 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
BRCC3P46736 SNORA27.1-201ENST00000362604 124 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 Y_RNA.128-201ENST00000363391 112 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 RNU6-414P-201ENST00000363705 104 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 Y_RNA.172-201ENST00000363765 102 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 SNORD115-30-201ENST00000364117 82 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 RNU6-450P-201ENST00000364654 107 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 SNORA12.1-201ENST00000390873 148 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 SNORA40.6-201ENST00000391153 128 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 MRPL35P1-201ENST00000404272 572 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 MIR1302-11-201ENST00000408051 138 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 MIR1302-9-201ENST00000408365 138 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 MIR1302-10-201ENST00000408734 138 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.39□□□□□ -2.19
BRCC3P46736 AL161935.2-201ENST00000414627 60 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 SDAD1P3-201ENST00000427380 333 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 MTCYBP6-201ENST00000441810 138 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 RPS27P22-201ENST00000478056 241 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 RPL36AP21-201ENST00000490372 323 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 SNORA31.10-201ENST00000516482 106 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 RNU6-1137P-201ENST00000517073 99 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.39□□□□□ -2.19
BRCC3P46736 MIR4422-201ENST00000581938 83 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 MIR1302-2-201ENST00000607096 138 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 AC010205.1-201ENST00000616668 449 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 AC134503.1-201ENST00000633048 54 ntBASIC1.39□□□□□ -2.19
BRCC3P46736 AC005592.1-201ENST00000566527 1640 ntBASIC1.38□□□□□ -2.19
BRCC3P46736 RNU1-22P-201ENST00000363334 158 ntBASIC1.38□□□□□ -2.19
BRCC3P46736 Y_RNA.361-201ENST00000365515 120 ntBASIC1.38□□□□□ -2.19
BRCC3P46736 Y_RNA.446-201ENST00000384178 104 ntBASIC1.38□□□□□ -2.19
BRCC3P46736 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
BRCC3P46736 RPL21P1-201ENST00000399532 476 ntBASIC1.38□□□□□ -2.19
BRCC3P46736 MTCO3P19-201ENST00000415864 321 ntBASIC1.38□□□□□ -2.19
BRCC3P46736 AC010154.1-201ENST00000425857 269 ntBASIC1.38□□□□□ -2.19
BRCC3P46736 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.38□□□□□ -2.19
BRCC3P46736 RPEP5-201ENST00000441137 268 ntBASIC1.38□□□□□ -2.19
BRCC3P46736 MRPS10P1-201ENST00000448483 130 ntBASIC1.38□□□□□ -2.19
BRCC3P46736 AC245517.4-201ENST00000448601 281 ntBASIC1.38□□□□□ -2.19
BRCC3P46736 snoU13.9-201ENST00000458927 103 ntBASIC1.38□□□□□ -2.19
BRCC3P46736 AC005908.1-201ENST00000468701 347 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms