Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AL021879.1-201ENST00000611756 288 ntBASIC1.74□□□□□ -2.13
MTHFRP42898 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.74□□□□□ -2.13
MTHFRP42898 MIR8074-201ENST00000615081 81 ntBASIC1.74□□□□□ -2.13
MTHFRP42898 AC010615.1-201ENST00000594254 1764 ntBASIC1.74□□□□□ -2.13
MTHFRP42898 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
MTHFRP42898 RNU6-1266P-201ENST00000362794 105 ntBASIC1.73□□□□□ -2.13
MTHFRP42898 RNU6-392P-201ENST00000364926 101 ntBASIC1.73□□□□□ -2.13
MTHFRP42898 Y_RNA.389-201ENST00000383924 113 ntBASIC1.73□□□□□ -2.13
MTHFRP42898 MIR520A-201ENST00000384862 85 ntBASIC1.73□□□□□ -2.13
MTHFRP42898 MIR628-201ENST00000385229 95 ntBASIC1.73□□□□□ -2.13
MTHFRP42898 RNA5SP467-201ENST00000391274 118 ntBASIC1.73□□□□□ -2.13
MTHFRP42898 MIR1252-201ENST00000408861 65 ntBASIC1.73□□□□□ -2.13
MTHFRP42898 MTCO3P19-201ENST00000415864 321 ntBASIC1.73□□□□□ -2.13
MTHFRP42898 EBAG9P1-201ENST00000418955 543 ntBASIC1.73□□□□□ -2.13
MTHFRP42898 SDAD1P3-201ENST00000427380 333 ntBASIC1.73□□□□□ -2.13
MTHFRP42898 TOMM22P2-201ENST00000430735 237 ntBASIC1.73□□□□□ -2.13
MTHFRP42898 RPEP5-201ENST00000441137 268 ntBASIC1.73□□□□□ -2.13
MTHFRP42898 PCNPP5-201ENST00000452246 481 ntBASIC1.73□□□□□ -2.13
MTHFRP42898 MTND5P22-201ENST00000458380 195 ntBASIC1.73□□□□□ -2.13
MTHFRP42898 snoU13.18-201ENST00000459483 104 ntBASIC1.73□□□□□ -2.13
MTHFRP42898 Y_RNA.721-201ENST00000517207 102 ntBASIC1.73□□□□□ -2.13
MTHFRP42898 RNA5SP437-201ENST00000517249 129 ntBASIC1.73□□□□□ -2.13
MTHFRP42898 CYCSP23-201ENST00000519781 313 ntBASIC1.73□□□□□ -2.13
MTHFRP42898 MIR3618-201ENST00000580330 88 ntBASIC1.73□□□□□ -2.13
MTHFRP42898 AC124312.5-201ENST00000604451 268 ntBASIC1.73□□□□□ -2.13
MTHFRP42898 RAC1P9-201ENST00000604990 392 ntBASIC1.73□□□□□ -2.13
MTHFRP42898 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.73□□□□□ -2.13
MTHFRP42898 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
MTHFRP42898 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
MTHFRP42898 MIR424-201ENST00000362227 98 ntBASIC1.72□□□□□ -2.13
MTHFRP42898 Y_RNA.133-201ENST00000363428 110 ntBASIC1.72□□□□□ -2.13
MTHFRP42898 RNU6-60P-201ENST00000364792 103 ntBASIC1.72□□□□□ -2.13
MTHFRP42898 Y_RNA.380-201ENST00000365663 111 ntBASIC1.72□□□□□ -2.13
MTHFRP42898 RNU6-1264P-201ENST00000383891 107 ntBASIC1.72□□□□□ -2.13
MTHFRP42898 Y_RNA.458-201ENST00000384240 102 ntBASIC1.72□□□□□ -2.13
MTHFRP42898 RNU6-1105P-201ENST00000384774 107 ntBASIC1.72□□□□□ -2.13
MTHFRP42898 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
MTHFRP42898 SNORD12B-201ENST00000410433 91 ntBASIC1.72□□□□□ -2.13
MTHFRP42898 RNU2-7P-201ENST00000410794 178 ntBASIC1.72□□□□□ -2.13
MTHFRP42898 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.72□□□□□ -2.13
MTHFRP42898 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.72□□□□□ -2.13
MTHFRP42898 FCF1P4-201ENST00000448326 183 ntBASIC1.72□□□□□ -2.13
MTHFRP42898 MTATP8P1-201ENST00000467115 207 ntBASIC1.72□□□□□ -2.13
MTHFRP42898 SNORA40.9-201ENST00000515895 93 ntBASIC1.72□□□□□ -2.13
MTHFRP42898 AC027419.1-201ENST00000522976 328 ntBASIC1.72□□□□□ -2.13
MTHFRP42898 AC018448.1-201ENST00000552843 316 ntBASIC1.72□□□□□ -2.13
MTHFRP42898 AL117187.1-201ENST00000555482 181 ntBASIC1.72□□□□□ -2.13
MTHFRP42898 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.72□□□□□ -2.13
MTHFRP42898 AL355297.3-201ENST00000604082 446 ntBASIC1.72□□□□□ -2.13
MTHFRP42898 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.72□□□□□ -2.13
MTHFRP42898 AC010205.1-201ENST00000616668 449 ntBASIC1.72□□□□□ -2.13
MTHFRP42898 RNU1-42P-201ENST00000364033 160 ntBASIC1.71□□□□□ -2.14
MTHFRP42898 Y_RNA.224-201ENST00000364308 111 ntBASIC1.71□□□□□ -2.14
MTHFRP42898 Y_RNA.424-201ENST00000384063 103 ntBASIC1.71□□□□□ -2.14
MTHFRP42898 Y_RNA.498-201ENST00000384460 102 ntBASIC1.71□□□□□ -2.14
MTHFRP42898 Y_RNA.551-201ENST00000384661 102 ntBASIC1.71□□□□□ -2.14
MTHFRP42898 RNA5SP323-201ENST00000391094 133 ntBASIC1.71□□□□□ -2.14
MTHFRP42898 RPL21P1-201ENST00000399532 476 ntBASIC1.71□□□□□ -2.14
MTHFRP42898 RNU6-101P-201ENST00000410323 104 ntBASIC1.71□□□□□ -2.14
MTHFRP42898 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.71□□□□□ -2.14
MTHFRP42898 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.71□□□□□ -2.14
MTHFRP42898 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.71□□□□□ -2.14
MTHFRP42898 RNU6-625P-201ENST00000459412 107 ntBASIC1.71□□□□□ -2.14
MTHFRP42898 AC131281.1-201ENST00000522984 164 ntBASIC1.71□□□□□ -2.14
MTHFRP42898 AL390123.1-201ENST00000603216 237 ntBASIC1.71□□□□□ -2.14
MTHFRP42898 AL645939.4-201ENST00000604495 135 ntBASIC1.71□□□□□ -2.14
MTHFRP42898 AL121655.1-201ENST00000605811 308 ntBASIC1.71□□□□□ -2.14
MTHFRP42898 AC011476.5-201ENST00000615594 130 ntBASIC1.71□□□□□ -2.14
MTHFRP42898 AC240442.1-201ENST00000616055 283 ntBASIC1.71□□□□□ -2.14
MTHFRP42898 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
MTHFRP42898 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
MTHFRP42898 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
MTHFRP42898 Y_RNA.105-201ENST00000363182 111 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 SNORA63D-201ENST00000364359 132 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 RNU4-50P-201ENST00000364361 141 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 Y_RNA.276-201ENST00000364732 109 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 SNORD48-201ENST00000364953 64 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 SNORA63.7-201ENST00000365579 123 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 RNU6-338P-201ENST00000383888 105 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 RNU6-926P-201ENST00000384075 107 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 Y_RNA.459-201ENST00000384251 102 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 Y_RNA.526-201ENST00000384572 110 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 MIR489-201ENST00000384923 84 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 SNORD78.2-201ENST00000391076 69 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 SNORA67.6-201ENST00000391093 99 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.7□□□□□ -2.14
MTHFRP42898 MRPL35P1-201ENST00000404272 572 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 MIR1276-201ENST00000408707 83 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.7□□□□□ -2.14
MTHFRP42898 FTH1P12-201ENST00000432137 551 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 HSPE1P9-201ENST00000440046 311 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 AC074133.1-201ENST00000515696 183 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 AP002001.1-203ENST00000534002 267 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 AL162730.1-201ENST00000605734 292 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 MIR6504-201ENST00000613520 61 ntBASIC1.7□□□□□ -2.14
MTHFRP42898 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
MTHFRP42898 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.69□□□□□ -2.14
MTHFRP42898 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.69□□□□□ -2.14
MTHFRP42898 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms