Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 Y_RNA.458-201ENST00000384240 102 ntBASIC2.01□□□□□ -2.09
KRT9P35527 Y_RNA.477-201ENST00000384352 108 ntBASIC2.01□□□□□ -2.09
KRT9P35527 RNU6-417P-201ENST00000384712 107 ntBASIC2.01□□□□□ -2.09
KRT9P35527 RNU2-38P-201ENST00000410856 79 ntBASIC2.01□□□□□ -2.09
KRT9P35527 AL445685.2-201ENST00000422551 342 ntBASIC2.01□□□□□ -2.09
KRT9P35527 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.01□□□□□ -2.09
KRT9P35527 RNU6-1023P-201ENST00000516137 106 ntBASIC2.01□□□□□ -2.09
KRT9P35527 Y_RNA.772-201ENST00000606692 102 ntBASIC2.01□□□□□ -2.09
KRT9P35527 AC141273.2-201ENST00000618989 130 ntBASIC2.01□□□□□ -2.09
KRT9P35527 RNU6-1240P-201ENST00000365155 104 ntBASIC2□□□□□ -2.09
KRT9P35527 Y_RNA.478-201ENST00000384358 107 ntBASIC2□□□□□ -2.09
KRT9P35527 RNY3P4-201ENST00000384428 101 ntBASIC2□□□□□ -2.09
KRT9P35527 MIR329-1-201ENST00000385028 80 ntBASIC2□□□□□ -2.09
KRT9P35527 AL079342.1-201ENST00000401460 267 ntBASIC2□□□□□ -2.09
KRT9P35527 SDAD1P3-201ENST00000427380 333 ntBASIC2□□□□□ -2.09
KRT9P35527 U8.22-201ENST00000459141 133 ntBASIC2□□□□□ -2.09
KRT9P35527 AC010469.2-201ENST00000496412 480 ntBASIC2□□□□□ -2.09
KRT9P35527 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2□□□□□ -2.09
KRT9P35527 Y_RNA.680-201ENST00000516441 93 ntBASIC2□□□□□ -2.09
KRT9P35527 RNU6-548P-201ENST00000517083 115 ntBASIC2□□□□□ -2.09
KRT9P35527 RNA5SP437-201ENST00000517249 129 ntBASIC2□□□□□ -2.09
KRT9P35527 AC022868.1-201ENST00000517767 391 ntBASIC2□□□□□ -2.09
KRT9P35527 Y_RNA.140-201ENST00000363474 103 ntBASIC1.99□□□□□ -2.09
KRT9P35527 SNORA63D-201ENST00000364359 132 ntBASIC1.99□□□□□ -2.09
KRT9P35527 SNORA72.2-201ENST00000365028 127 ntBASIC1.99□□□□□ -2.09
KRT9P35527 RNU2-7P-201ENST00000410794 178 ntBASIC1.99□□□□□ -2.09
KRT9P35527 RNU6-130P-201ENST00000411112 103 ntBASIC1.99□□□□□ -2.09
KRT9P35527 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.99□□□□□ -2.09
KRT9P35527 MTND4LP30-201ENST00000454092 297 ntBASIC1.99□□□□□ -2.09
KRT9P35527 AC098869.1-201ENST00000481627 292 ntBASIC1.99□□□□□ -2.09
KRT9P35527 Y_RNA.673-201ENST00000516306 88 ntBASIC1.99□□□□□ -2.09
KRT9P35527 MIR4419B-201ENST00000577260 68 ntBASIC1.99□□□□□ -2.09
KRT9P35527 MIR376A1-201ENST00000616574 68 ntBASIC1.99□□□□□ -2.09
KRT9P35527 U6.92-201ENST00000636464 89 ntBASIC1.99□□□□□ -2.09
KRT9P35527 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.99□□□□□ -2.09
KRT9P35527 AL391987.6-201ENST00000305671 199 ntBASIC1.98□□□□□ -2.09
KRT9P35527 RNA5SP361-201ENST00000362686 118 ntBASIC1.98□□□□□ -2.09
KRT9P35527 Y_RNA.60-201ENST00000362831 98 ntBASIC1.98□□□□□ -2.09
KRT9P35527 Y_RNA.105-201ENST00000363182 111 ntBASIC1.98□□□□□ -2.09
KRT9P35527 Y_RNA.164-201ENST00000363709 102 ntBASIC1.98□□□□□ -2.09
KRT9P35527 RNU6-879P-201ENST00000364328 108 ntBASIC1.98□□□□□ -2.09
KRT9P35527 Y_RNA.562-201ENST00000384695 113 ntBASIC1.98□□□□□ -2.09
KRT9P35527 MIR515-2-201ENST00000384883 83 ntBASIC1.98□□□□□ -2.09
KRT9P35527 MIR515-1-201ENST00000384884 83 ntBASIC1.98□□□□□ -2.09
KRT9P35527 Y_RNA.595-201ENST00000410403 105 ntBASIC1.98□□□□□ -2.09
KRT9P35527 RNU6-121P-201ENST00000410525 99 ntBASIC1.98□□□□□ -2.09
KRT9P35527 RPL21P38-201ENST00000418090 167 ntBASIC1.98□□□□□ -2.09
KRT9P35527 EBAG9P1-201ENST00000418955 543 ntBASIC1.98□□□□□ -2.09
KRT9P35527 HSPE1P21-201ENST00000438283 308 ntBASIC1.98□□□□□ -2.09
KRT9P35527 HSPE1P9-201ENST00000440046 311 ntBASIC1.98□□□□□ -2.09
KRT9P35527 AC003989.2-201ENST00000440224 169 ntBASIC1.98□□□□□ -2.09
KRT9P35527 AC069257.2-201ENST00000441819 155 ntBASIC1.98□□□□□ -2.09
KRT9P35527 HMGN2P23-201ENST00000456759 269 ntBASIC1.98□□□□□ -2.09
KRT9P35527 snoU13.23-201ENST00000458863 104 ntBASIC1.98□□□□□ -2.09
KRT9P35527 HMGB3P17-201ENST00000504195 649 ntBASIC1.98□□□□□ -2.09
KRT9P35527 AC025465.3-201ENST00000510570 311 ntBASIC1.98□□□□□ -2.09
KRT9P35527 RNU6-107P-201ENST00000516643 102 ntBASIC1.98□□□□□ -2.09
KRT9P35527 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.98□□□□□ -2.09
KRT9P35527 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRT9P35527 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
KRT9P35527 Y_RNA.84-201ENST00000363011 104 ntBASIC1.97□□□□□ -2.09
KRT9P35527 Y_RNA.143-201ENST00000363520 106 ntBASIC1.97□□□□□ -2.09
KRT9P35527 SNORD48-201ENST00000364953 64 ntBASIC1.97□□□□□ -2.09
KRT9P35527 SNORD115-46-201ENST00000390982 71 ntBASIC1.97□□□□□ -2.09
KRT9P35527 SNORD78.2-201ENST00000391076 69 ntBASIC1.97□□□□□ -2.09
KRT9P35527 RNA5SP467-201ENST00000391274 118 ntBASIC1.97□□□□□ -2.09
KRT9P35527 MIR548H3-201ENST00000408771 118 ntBASIC1.97□□□□□ -2.09
KRT9P35527 RNU6-1203P-201ENST00000410703 110 ntBASIC1.97□□□□□ -2.09
KRT9P35527 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.97□□□□□ -2.09
KRT9P35527 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.97□□□□□ -2.09
KRT9P35527 MTND1P19-201ENST00000511780 315 ntBASIC1.97□□□□□ -2.09
KRT9P35527 CYCSP23-201ENST00000519781 313 ntBASIC1.97□□□□□ -2.09
KRT9P35527 AC024614.2-201ENST00000577584 372 ntBASIC1.97□□□□□ -2.09
KRT9P35527 MIR4659A-201ENST00000580269 81 ntBASIC1.97□□□□□ -2.09
KRT9P35527 AC012433.1-201ENST00000588916 398 ntBASIC1.97□□□□□ -2.09
KRT9P35527 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.97□□□□□ -2.09
KRT9P35527 AC240442.1-201ENST00000616055 283 ntBASIC1.97□□□□□ -2.09
KRT9P35527 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.97□□□□□ -2.09
KRT9P35527 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRT9P35527 MIR335-201ENST00000362173 94 ntBASIC1.96□□□□□ -2.1
KRT9P35527 RNU6-1301P-201ENST00000362724 104 ntBASIC1.96□□□□□ -2.1
KRT9P35527 RNU6-1266P-201ENST00000362794 105 ntBASIC1.96□□□□□ -2.1
KRT9P35527 Y_RNA.416-201ENST00000384014 113 ntBASIC1.96□□□□□ -2.1
KRT9P35527 RNU6-1145P-201ENST00000384246 107 ntBASIC1.96□□□□□ -2.1
KRT9P35527 MIR215-201ENST00000384858 110 ntBASIC1.96□□□□□ -2.1
KRT9P35527 MIR30A-201ENST00000385092 71 ntBASIC1.96□□□□□ -2.1
KRT9P35527 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
KRT9P35527 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.96□□□□□ -2.1
KRT9P35527 TOMM22P2-201ENST00000430735 237 ntBASIC1.96□□□□□ -2.1
KRT9P35527 UQCRBP2-201ENST00000447827 297 ntBASIC1.96□□□□□ -2.1
KRT9P35527 AC107393.1-201ENST00000512403 346 ntBASIC1.96□□□□□ -2.1
KRT9P35527 RNA5SP182-201ENST00000516064 82 ntBASIC1.96□□□□□ -2.1
KRT9P35527 SNORA44.1-201ENST00000517031 108 ntBASIC1.96□□□□□ -2.1
KRT9P35527 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.96□□□□□ -2.1
KRT9P35527 MIR3122-201ENST00000577243 73 ntBASIC1.96□□□□□ -2.1
KRT9P35527 AL357075.2-201ENST00000614906 189 ntBASIC1.96□□□□□ -2.1
KRT9P35527 MIR8074-201ENST00000615081 81 ntBASIC1.96□□□□□ -2.1
KRT9P35527 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRT9P35527 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRT9P35527 Y_RNA.20-201ENST00000362479 113 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms