Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RNU6-648P-201ENST00000410190 107 ntBASIC0.22□□□□□ -2.37
RPA3P35244 RNU6-1304P-201ENST00000411374 106 ntBASIC0.22□□□□□ -2.37
RPA3P35244 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.22□□□□□ -2.37
RPA3P35244 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.22□□□□□ -2.37
RPA3P35244 RN7SKP298-201ENST00000515950 94 ntBASIC0.22□□□□□ -2.37
RPA3P35244 RNU6-63P-201ENST00000516690 95 ntBASIC0.22□□□□□ -2.37
RPA3P35244 MIR5696-201ENST00000578474 85 ntBASIC0.22□□□□□ -2.37
RPA3P35244 MIR4764-201ENST00000580680 88 ntBASIC0.22□□□□□ -2.37
RPA3P35244 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.22□□□□□ -2.37
RPA3P35244 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
RPA3P35244 RNU6-222P-201ENST00000362438 107 ntBASIC0.21□□□□□ -2.38
RPA3P35244 RNU6-1264P-201ENST00000383891 107 ntBASIC0.21□□□□□ -2.38
RPA3P35244 Y_RNA.405-201ENST00000383979 100 ntBASIC0.21□□□□□ -2.38
RPA3P35244 Y_RNA.451-201ENST00000384200 100 ntBASIC0.21□□□□□ -2.38
RPA3P35244 Y_RNA.524-201ENST00000384564 100 ntBASIC0.21□□□□□ -2.38
RPA3P35244 Y_RNA.561-201ENST00000384694 100 ntBASIC0.21□□□□□ -2.38
RPA3P35244 RNU6-177P-201ENST00000411257 104 ntBASIC0.21□□□□□ -2.38
RPA3P35244 AC243428.1-201ENST00000421099 264 ntBASIC0.21□□□□□ -2.38
RPA3P35244 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.21□□□□□ -2.38
RPA3P35244 RNU7-175P-201ENST00000515915 61 ntBASIC0.21□□□□□ -2.38
RPA3P35244 SNORA18.7-201ENST00000516910 131 ntBASIC0.21□□□□□ -2.38
RPA3P35244 AC093023.1-201ENST00000547375 507 ntBASIC0.21□□□□□ -2.38
RPA3P35244 MIR3684-201ENST00000579779 74 ntBASIC0.21□□□□□ -2.38
RPA3P35244 Z69908.1-201ENST00000622603 247 ntBASIC0.21□□□□□ -2.38
RPA3P35244 RNA5SP48-201ENST00000363969 126 ntBASIC0.2□□□□□ -2.38
RPA3P35244 RNU6-342P-201ENST00000384521 104 ntBASIC0.2□□□□□ -2.38
RPA3P35244 MIR136-201ENST00000385207 82 ntBASIC0.2□□□□□ -2.38
RPA3P35244 RNA5SP95-201ENST00000410319 137 ntBASIC0.2□□□□□ -2.38
RPA3P35244 ELOCP21-201ENST00000412558 336 ntBASIC0.2□□□□□ -2.38
RPA3P35244 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.2□□□□□ -2.38
RPA3P35244 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.2□□□□□ -2.38
RPA3P35244 MTND3P23-201ENST00000431980 347 ntBASIC0.2□□□□□ -2.38
RPA3P35244 MTATP6P13-201ENST00000438531 667 ntBASIC0.2□□□□□ -2.38
RPA3P35244 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.2□□□□□ -2.38
RPA3P35244 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.2□□□□□ -2.38
RPA3P35244 ZNF519P2-201ENST00000557032 169 ntBASIC0.2□□□□□ -2.38
RPA3P35244 RN7SL793P-201ENST00000583259 296 ntBASIC0.2□□□□□ -2.38
RPA3P35244 AC019193.3-201ENST00000609144 554 ntBASIC0.2□□□□□ -2.38
RPA3P35244 U6.115-201ENST00000636045 103 ntBASIC0.2□□□□□ -2.38
RPA3P35244 AC010487.4-201ENST00000637027 61 ntBASIC0.2□□□□□ -2.38
RPA3P35244 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.19□□□□□ -2.38
RPA3P35244 Y_RNA.373-201ENST00000365600 103 ntBASIC0.19□□□□□ -2.38
RPA3P35244 SNORA2B-201ENST00000384583 137 ntBASIC0.19□□□□□ -2.38
RPA3P35244 Y_RNA.533-201ENST00000384596 114 ntBASIC0.19□□□□□ -2.38
RPA3P35244 MIR873-201ENST00000401120 77 ntBASIC0.19□□□□□ -2.38
RPA3P35244 MIR1302-7-201ENST00000408841 72 ntBASIC0.19□□□□□ -2.38
RPA3P35244 RNU6-1001P-201ENST00000411265 100 ntBASIC0.19□□□□□ -2.38
RPA3P35244 AL390729.2-201ENST00000416137 156 ntBASIC0.19□□□□□ -2.38
RPA3P35244 ERLEC1P1-201ENST00000433806 578 ntBASIC0.19□□□□□ -2.38
RPA3P35244 RNU6-956P-201ENST00000458868 103 ntBASIC0.19□□□□□ -2.38
RPA3P35244 RNU6-1114P-201ENST00000516022 107 ntBASIC0.19□□□□□ -2.38
RPA3P35244 RNU11-2P-201ENST00000516898 142 ntBASIC0.19□□□□□ -2.38
RPA3P35244 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.19□□□□□ -2.38
RPA3P35244 AC093027.1-201ENST00000546698 429 ntBASIC0.19□□□□□ -2.38
RPA3P35244 AL591926.4-201ENST00000616895 298 ntBASIC0.19□□□□□ -2.38
RPA3P35244 AC008133.2-201ENST00000624540 351 ntBASIC0.19□□□□□ -2.38
RPA3P35244 MIR1-1-201ENST00000362147 71 ntBASIC0.18□□□□□ -2.38
RPA3P35244 Y_RNA.393-201ENST00000383936 102 ntBASIC0.18□□□□□ -2.38
RPA3P35244 RNY1P4-201ENST00000384595 115 ntBASIC0.18□□□□□ -2.38
RPA3P35244 RNU2-70P-201ENST00000410718 179 ntBASIC0.18□□□□□ -2.38
RPA3P35244 RNU6-1068P-201ENST00000410958 103 ntBASIC0.18□□□□□ -2.38
RPA3P35244 Y_RNA.621-201ENST00000411065 96 ntBASIC0.18□□□□□ -2.38
RPA3P35244 UQCRBP2-201ENST00000447827 297 ntBASIC0.18□□□□□ -2.38
RPA3P35244 AC092989.1-201ENST00000481235 277 ntBASIC0.18□□□□□ -2.38
RPA3P35244 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.18□□□□□ -2.38
RPA3P35244 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.18□□□□□ -2.38
RPA3P35244 AC092954.2-201ENST00000609103 430 ntBASIC0.18□□□□□ -2.38
RPA3P35244 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
RPA3P35244 AL138726.1-201ENST00000614873 333 ntBASIC0.18□□□□□ -2.38
RPA3P35244 AL357075.2-201ENST00000614906 189 ntBASIC0.18□□□□□ -2.38
RPA3P35244 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.17□□□□□ -2.38
RPA3P35244 AC090625.1-201ENST00000357130 210 ntBASIC0.17□□□□□ -2.38
RPA3P35244 USP9YP16-201ENST00000430287 407 ntBASIC0.17□□□□□ -2.38
RPA3P35244 AL392103.1-201ENST00000447000 198 ntBASIC0.17□□□□□ -2.38
RPA3P35244 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.17□□□□□ -2.38
RPA3P35244 USP9YP23-201ENST00000455085 407 ntBASIC0.17□□□□□ -2.38
RPA3P35244 AC108740.1-201ENST00000498629 225 ntBASIC0.17□□□□□ -2.38
RPA3P35244 Y_RNA.665-201ENST00000516177 98 ntBASIC0.17□□□□□ -2.38
RPA3P35244 RNU7-43P-201ENST00000516554 64 ntBASIC0.17□□□□□ -2.38
RPA3P35244 AC124303.1-201ENST00000605703 360 ntBASIC0.17□□□□□ -2.38
RPA3P35244 MIR924-201ENST00000638017 53 ntBASIC0.17□□□□□ -2.38
RPA3P35244 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.17□□□□□ -2.38
RPA3P35244 U8.5-201ENST00000364528 136 ntBASIC0.16□□□□□ -2.38
RPA3P35244 AC117470.1-201ENST00000381974 330 ntBASIC0.16□□□□□ -2.38
RPA3P35244 MIR573-201ENST00000384964 99 ntBASIC0.16□□□□□ -2.38
RPA3P35244 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
RPA3P35244 Y_RNA.582-201ENST00000391023 95 ntBASIC0.16□□□□□ -2.38
RPA3P35244 AL354751.2-201ENST00000415471 210 ntBASIC0.16□□□□□ -2.38
RPA3P35244 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.16□□□□□ -2.38
RPA3P35244 AC092447.3-201ENST00000426027 686 ntBASIC0.16□□□□□ -2.38
RPA3P35244 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.16□□□□□ -2.38
RPA3P35244 AC012433.1-201ENST00000588916 398 ntBASIC0.16□□□□□ -2.38
RPA3P35244 AC125232.2-201ENST00000592457 143 ntBASIC0.16□□□□□ -2.38
RPA3P35244 AC104695.3-201ENST00000604052 296 ntBASIC0.16□□□□□ -2.38
RPA3P35244 AC104260.1-201ENST00000616660 539 ntBASIC0.16□□□□□ -2.38
RPA3P35244 MIR103A1-201ENST00000362165 78 ntBASIC0.15□□□□□ -2.39
RPA3P35244 Y_RNA.106-201ENST00000363189 100 ntBASIC0.15□□□□□ -2.39
RPA3P35244 RNU6-1327P-201ENST00000365302 105 ntBASIC0.15□□□□□ -2.39
RPA3P35244 Y_RNA.481-201ENST00000384373 102 ntBASIC0.15□□□□□ -2.39
RPA3P35244 RNU6-306P-201ENST00000384617 107 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 995.3 ms