Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC108667.1-201ENST00000428618 249 ntBASIC1.91□□□□□ -2.1
HOXA13P31271 AL731563.1-201ENST00000442202 214 ntBASIC1.91□□□□□ -2.1
HOXA13P31271 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.91□□□□□ -2.1
HOXA13P31271 RNU6-221P-201ENST00000459541 99 ntBASIC1.91□□□□□ -2.1
HOXA13P31271 CYCSP23-201ENST00000519781 313 ntBASIC1.91□□□□□ -2.1
HOXA13P31271 AC027419.1-201ENST00000522976 328 ntBASIC1.91□□□□□ -2.1
HOXA13P31271 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.91□□□□□ -2.1
HOXA13P31271 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.91□□□□□ -2.1
HOXA13P31271 MIR3618-201ENST00000580330 88 ntBASIC1.91□□□□□ -2.1
HOXA13P31271 MIR4423-201ENST00000580922 80 ntBASIC1.91□□□□□ -2.1
HOXA13P31271 7SK.10-201ENST00000621414 298 ntBASIC1.91□□□□□ -2.1
HOXA13P31271 MIR8062-201ENST00000621515 85 ntBASIC1.91□□□□□ -2.1
HOXA13P31271 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
HOXA13P31271 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
HOXA13P31271 Y_RNA.176-201ENST00000363815 109 ntBASIC1.9□□□□□ -2.11
HOXA13P31271 SNORD48-201ENST00000364953 64 ntBASIC1.9□□□□□ -2.11
HOXA13P31271 Y_RNA.461-201ENST00000384263 103 ntBASIC1.9□□□□□ -2.11
HOXA13P31271 RNU6-463P-201ENST00000384340 107 ntBASIC1.9□□□□□ -2.11
HOXA13P31271 Y_RNA.541-201ENST00000384640 113 ntBASIC1.9□□□□□ -2.11
HOXA13P31271 Y_RNA.570-201ENST00000384750 101 ntBASIC1.9□□□□□ -2.11
HOXA13P31271 SNORD115-46-201ENST00000390982 71 ntBASIC1.9□□□□□ -2.11
HOXA13P31271 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.9□□□□□ -2.11
HOXA13P31271 MIR1185-2-201ENST00000408687 86 ntBASIC1.9□□□□□ -2.11
HOXA13P31271 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.9□□□□□ -2.11
HOXA13P31271 HSPE1P25-201ENST00000455484 251 ntBASIC1.9□□□□□ -2.11
HOXA13P31271 RN7SL274P-201ENST00000492268 272 ntBASIC1.9□□□□□ -2.11
HOXA13P31271 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.9□□□□□ -2.11
HOXA13P31271 Y_RNA.713-201ENST00000517013 96 ntBASIC1.9□□□□□ -2.11
HOXA13P31271 AC025647.1-201ENST00000517879 253 ntBASIC1.9□□□□□ -2.11
HOXA13P31271 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.9□□□□□ -2.11
HOXA13P31271 AL161670.1-201ENST00000554348 137 ntBASIC1.9□□□□□ -2.11
HOXA13P31271 Y_RNA.772-201ENST00000606692 102 ntBASIC1.9□□□□□ -2.11
HOXA13P31271 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.9□□□□□ -2.11
HOXA13P31271 AC022513.1-201ENST00000624512 117 ntBASIC1.9□□□□□ -2.11
HOXA13P31271 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
HOXA13P31271 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HOXA13P31271 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.9□□□□□ -2.11
HOXA13P31271 CENPCP1-201ENST00000533085 2578 ntBASIC1.9□□□□□ -2.11
HOXA13P31271 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HOXA13P31271 snoU2-30.2-201ENST00000362805 70 ntBASIC1.89□□□□□ -2.11
HOXA13P31271 Y_RNA.84-201ENST00000363011 104 ntBASIC1.89□□□□□ -2.11
HOXA13P31271 SNORD81.1-201ENST00000363064 77 ntBASIC1.89□□□□□ -2.11
HOXA13P31271 SNORD113-8-201ENST00000363497 74 ntBASIC1.89□□□□□ -2.11
HOXA13P31271 RNU6-1175P-201ENST00000365200 107 ntBASIC1.89□□□□□ -2.11
HOXA13P31271 RNU6-1199P-201ENST00000411249 104 ntBASIC1.89□□□□□ -2.11
HOXA13P31271 AC099677.2-201ENST00000436385 175 ntBASIC1.89□□□□□ -2.11
HOXA13P31271 NDUFB4P10-201ENST00000452541 359 ntBASIC1.89□□□□□ -2.11
HOXA13P31271 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.89□□□□□ -2.11
HOXA13P31271 RNA5SP458-201ENST00000516188 119 ntBASIC1.89□□□□□ -2.11
HOXA13P31271 CBX3P4-201ENST00000538909 354 ntBASIC1.89□□□□□ -2.11
HOXA13P31271 MIR4303-201ENST00000581299 66 ntBASIC1.89□□□□□ -2.11
HOXA13P31271 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.89□□□□□ -2.11
HOXA13P31271 AP000942.3-201ENST00000603702 160 ntBASIC1.89□□□□□ -2.11
HOXA13P31271 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.89□□□□□ -2.11
HOXA13P31271 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.89□□□□□ -2.11
HOXA13P31271 AC004467.1-201ENST00000615678 330 ntBASIC1.89□□□□□ -2.11
HOXA13P31271 MIR338-201ENST00000636369 67 ntBASIC1.89□□□□□ -2.11
HOXA13P31271 RNA5SP475-201ENST00000410568 110 ntBASIC1.88□□□□□ -2.11
HOXA13P31271 HMGB3P17-201ENST00000504195 649 ntBASIC1.88□□□□□ -2.11
HOXA13P31271 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HOXA13P31271 RNU6-496P-201ENST00000516145 99 ntBASIC1.88□□□□□ -2.11
HOXA13P31271 Y_RNA.668-201ENST00000516233 93 ntBASIC1.88□□□□□ -2.11
HOXA13P31271 Y_RNA.680-201ENST00000516441 93 ntBASIC1.88□□□□□ -2.11
HOXA13P31271 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.88□□□□□ -2.11
HOXA13P31271 MIR3149-201ENST00000584629 83 ntBASIC1.88□□□□□ -2.11
HOXA13P31271 AP001282.2-201ENST00000616149 309 ntBASIC1.88□□□□□ -2.11
HOXA13P31271 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
HOXA13P31271 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HOXA13P31271 Y_RNA.152-201ENST00000363578 100 ntBASIC1.87□□□□□ -2.11
HOXA13P31271 Y_RNA.446-201ENST00000384178 104 ntBASIC1.87□□□□□ -2.11
HOXA13P31271 RNU6-713P-201ENST00000384761 107 ntBASIC1.87□□□□□ -2.11
HOXA13P31271 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HOXA13P31271 RNU2-38P-201ENST00000410856 79 ntBASIC1.87□□□□□ -2.11
HOXA13P31271 AC016909.1-201ENST00000415916 166 ntBASIC1.87□□□□□ -2.11
HOXA13P31271 EBAG9P1-201ENST00000418955 543 ntBASIC1.87□□□□□ -2.11
HOXA13P31271 TOMM22P2-201ENST00000430735 237 ntBASIC1.87□□□□□ -2.11
HOXA13P31271 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.87□□□□□ -2.11
HOXA13P31271 MRPS10P1-201ENST00000448483 130 ntBASIC1.87□□□□□ -2.11
HOXA13P31271 MTND1P19-201ENST00000511780 315 ntBASIC1.87□□□□□ -2.11
HOXA13P31271 AC074133.1-201ENST00000515696 183 ntBASIC1.87□□□□□ -2.11
HOXA13P31271 RNU7-110P-201ENST00000516891 62 ntBASIC1.87□□□□□ -2.11
HOXA13P31271 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.87□□□□□ -2.11
HOXA13P31271 MIR3145-201ENST00000580727 82 ntBASIC1.87□□□□□ -2.11
HOXA13P31271 AC005176.2-201ENST00000596933 147 ntBASIC1.87□□□□□ -2.11
HOXA13P31271 MIR3674-201ENST00000636576 68 ntBASIC1.87□□□□□ -2.11
HOXA13P31271 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.87□□□□□ -2.11
HOXA13P31271 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
HOXA13P31271 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.86□□□□□ -2.11
HOXA13P31271 RNU6-661P-201ENST00000362409 107 ntBASIC1.86□□□□□ -2.11
HOXA13P31271 RNU6-1264P-201ENST00000383891 107 ntBASIC1.86□□□□□ -2.11
HOXA13P31271 Y_RNA.452-201ENST00000384202 108 ntBASIC1.86□□□□□ -2.11
HOXA13P31271 Y_RNA.581-201ENST00000391017 97 ntBASIC1.86□□□□□ -2.11
HOXA13P31271 RNA5SP467-201ENST00000391274 118 ntBASIC1.86□□□□□ -2.11
HOXA13P31271 RNU6-1186P-201ENST00000410429 97 ntBASIC1.86□□□□□ -2.11
HOXA13P31271 RNU6-1203P-201ENST00000410703 110 ntBASIC1.86□□□□□ -2.11
HOXA13P31271 RNU2-40P-201ENST00000410833 196 ntBASIC1.86□□□□□ -2.11
HOXA13P31271 RNA5SP100-201ENST00000410903 110 ntBASIC1.86□□□□□ -2.11
HOXA13P31271 RNA5SP59-201ENST00000410922 110 ntBASIC1.86□□□□□ -2.11
HOXA13P31271 CST2P1-201ENST00000425770 87 ntBASIC1.86□□□□□ -2.11
HOXA13P31271 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 239.3 ms