Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 RNA5SP233-201ENST00000459153 113 ntBASIC2.2□□□□□ -2.06
HOXA11P31270 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXA11P31270 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.2□□□□□ -2.06
HOXA11P31270 RNU6-1098P-201ENST00000516772 96 ntBASIC2.2□□□□□ -2.06
HOXA11P31270 MIR5089-201ENST00000580047 84 ntBASIC2.2□□□□□ -2.06
HOXA11P31270 AL512605.2-201ENST00000592972 256 ntBASIC2.2□□□□□ -2.06
HOXA11P31270 DEFB117-201ENST00000602356 141 ntBASIC2.2□□□□□ -2.06
HOXA11P31270 AL670379.2-201ENST00000604983 252 ntBASIC2.2□□□□□ -2.06
HOXA11P31270 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.2□□□□□ -2.06
HOXA11P31270 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXA11P31270 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HOXA11P31270 RNU6-1272P-201ENST00000362776 107 ntBASIC2.19□□□□□ -2.06
HOXA11P31270 Y_RNA.304-201ENST00000365011 112 ntBASIC2.19□□□□□ -2.06
HOXA11P31270 Y_RNA.329-201ENST00000365209 107 ntBASIC2.19□□□□□ -2.06
HOXA11P31270 Y_RNA.464-201ENST00000384282 110 ntBASIC2.19□□□□□ -2.06
HOXA11P31270 SNORA80E-201ENST00000384744 137 ntBASIC2.19□□□□□ -2.06
HOXA11P31270 MIR1294-201ENST00000408503 142 ntBASIC2.19□□□□□ -2.06
HOXA11P31270 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.19□□□□□ -2.06
HOXA11P31270 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXA11P31270 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXA11P31270 AC015712.3-201ENST00000559380 164 ntBASIC2.19□□□□□ -2.06
HOXA11P31270 MIR5692C2-201ENST00000577959 77 ntBASIC2.19□□□□□ -2.06
HOXA11P31270 MIR4524B-201ENST00000581569 115 ntBASIC2.19□□□□□ -2.06
HOXA11P31270 AL365434.2-201ENST00000607979 234 ntBASIC2.19□□□□□ -2.06
HOXA11P31270 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXA11P31270 U6.115-201ENST00000636045 103 ntBASIC2.19□□□□□ -2.06
HOXA11P31270 RNU6-682P-201ENST00000363843 106 ntBASIC2.18□□□□□ -2.06
HOXA11P31270 RNU6-234P-201ENST00000365229 104 ntBASIC2.18□□□□□ -2.06
HOXA11P31270 HMGN2P39-201ENST00000398005 273 ntBASIC2.18□□□□□ -2.06
HOXA11P31270 AL031003.1-201ENST00000404229 172 ntBASIC2.18□□□□□ -2.06
HOXA11P31270 AL512604.1-201ENST00000404812 257 ntBASIC2.18□□□□□ -2.06
HOXA11P31270 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.18□□□□□ -2.06
HOXA11P31270 MIR1283-1-201ENST00000408494 87 ntBASIC2.18□□□□□ -2.06
HOXA11P31270 Y_RNA.793-201ENST00000411222 111 ntBASIC2.18□□□□□ -2.06
HOXA11P31270 SUMO1P3-201ENST00000439961 304 ntBASIC2.18□□□□□ -2.06
HOXA11P31270 AC104332.1-201ENST00000440471 797 ntBASIC2.18□□□□□ -2.06
HOXA11P31270 AC016925.1-201ENST00000458303 298 ntBASIC2.18□□□□□ -2.06
HOXA11P31270 AP005660.1-201ENST00000522972 293 ntBASIC2.18□□□□□ -2.06
HOXA11P31270 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HOXA11P31270 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXA11P31270 SNRPGP19-201ENST00000603826 189 ntBASIC2.18□□□□□ -2.06
HOXA11P31270 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HOXA11P31270 MIRLET7G-201ENST00000362280 84 ntBASIC2.17□□□□□ -2.06
HOXA11P31270 RNU6-653P-201ENST00000363074 106 ntBASIC2.17□□□□□ -2.06
HOXA11P31270 SNORD31B-201ENST00000364977 69 ntBASIC2.17□□□□□ -2.06
HOXA11P31270 Y_RNA.368-201ENST00000365547 113 ntBASIC2.17□□□□□ -2.06
HOXA11P31270 RNU6-662P-201ENST00000384253 104 ntBASIC2.17□□□□□ -2.06
HOXA11P31270 RNU6-918P-201ENST00000391219 106 ntBASIC2.17□□□□□ -2.06
HOXA11P31270 RNU6-710P-201ENST00000410424 105 ntBASIC2.17□□□□□ -2.06
HOXA11P31270 AL356379.1-201ENST00000414105 126 ntBASIC2.17□□□□□ -2.06
HOXA11P31270 AL135790.2-201ENST00000437701 267 ntBASIC2.17□□□□□ -2.06
HOXA11P31270 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.17□□□□□ -2.06
HOXA11P31270 Y_RNA.637-201ENST00000459424 114 ntBASIC2.17□□□□□ -2.06
HOXA11P31270 RNU6-221P-201ENST00000459541 99 ntBASIC2.17□□□□□ -2.06
HOXA11P31270 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.17□□□□□ -2.06
HOXA11P31270 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.17□□□□□ -2.06
HOXA11P31270 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.17□□□□□ -2.06
HOXA11P31270 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HOXA11P31270 RNU5F-4P-201ENST00000516581 114 ntBASIC2.17□□□□□ -2.06
HOXA11P31270 RNU1-117P-201ENST00000517041 158 ntBASIC2.17□□□□□ -2.06
HOXA11P31270 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.17□□□□□ -2.06
HOXA11P31270 AC136628.3-201ENST00000521868 290 ntBASIC2.17□□□□□ -2.06
HOXA11P31270 MIR3145-201ENST00000580727 82 ntBASIC2.17□□□□□ -2.06
HOXA11P31270 AC072026.1-201ENST00000605023 201 ntBASIC2.17□□□□□ -2.06
HOXA11P31270 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.17□□□□□ -2.06
HOXA11P31270 AL008718.3-201ENST00000610217 321 ntBASIC2.17□□□□□ -2.06
HOXA11P31270 snoU18.1-201ENST00000629629 71 ntBASIC2.17□□□□□ -2.06
HOXA11P31270 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
HOXA11P31270 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HOXA11P31270 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HOXA11P31270 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
HOXA11P31270 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
HOXA11P31270 RNU6-211P-201ENST00000384047 107 ntBASIC2.16□□□□□ -2.06
HOXA11P31270 RNU6-975P-201ENST00000384296 105 ntBASIC2.16□□□□□ -2.06
HOXA11P31270 AC024067.1-201ENST00000426199 223 ntBASIC2.16□□□□□ -2.06
HOXA11P31270 ATP5EP1-201ENST00000510257 156 ntBASIC2.16□□□□□ -2.06
HOXA11P31270 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.16□□□□□ -2.06
HOXA11P31270 RNU6-237P-201ENST00000515985 71 ntBASIC2.16□□□□□ -2.06
HOXA11P31270 AP002392.1-201ENST00000537692 208 ntBASIC2.16□□□□□ -2.06
HOXA11P31270 DEFB122-202ENST00000569013 197 ntBASIC2.16□□□□□ -2.06
HOXA11P31270 AC005336.3-201ENST00000623833 2679 ntBASIC2.15□□□□□ -2.06
HOXA11P31270 RNU6-801P-201ENST00000364087 105 ntBASIC2.15□□□□□ -2.07
HOXA11P31270 RNU2-48P-201ENST00000410694 191 ntBASIC2.15□□□□□ -2.07
HOXA11P31270 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.15□□□□□ -2.07
HOXA11P31270 AL137159.1-201ENST00000452808 512 ntBASIC2.15□□□□□ -2.07
HOXA11P31270 AC107393.1-201ENST00000512403 346 ntBASIC2.15□□□□□ -2.07
HOXA11P31270 Y_RNA.679-201ENST00000516416 91 ntBASIC2.15□□□□□ -2.07
HOXA11P31270 RNU6-107P-201ENST00000516643 102 ntBASIC2.15□□□□□ -2.07
HOXA11P31270 AC024405.2-202ENST00000532731 184 ntBASIC2.15□□□□□ -2.07
HOXA11P31270 MIR4769-201ENST00000584126 77 ntBASIC2.15□□□□□ -2.07
HOXA11P31270 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.15□□□□□ -2.07
HOXA11P31270 AL627230.6-201ENST00000611129 280 ntBASIC2.15□□□□□ -2.07
HOXA11P31270 AC090517.3-201ENST00000625170 141 ntBASIC2.15□□□□□ -2.07
HOXA11P31270 U6.106-201ENST00000636360 105 ntBASIC2.15□□□□□ -2.07
HOXA11P31270 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
HOXA11P31270 ZNF702P-202ENST00000434269 1966 ntBASIC2.14□□□□□ -2.07
HOXA11P31270 Y_RNA.150-201ENST00000363562 102 ntBASIC2.14□□□□□ -2.07
HOXA11P31270 RNU6-1020P-201ENST00000363684 107 ntBASIC2.14□□□□□ -2.07
HOXA11P31270 RNU6-1305P-201ENST00000364353 104 ntBASIC2.14□□□□□ -2.07
HOXA11P31270 Y_RNA.240-201ENST00000364469 95 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms