Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.68□□□□□ -2.14
SHC1P29353 AC091959.1-201ENST00000495857 238 ntBASIC1.68□□□□□ -2.14
SHC1P29353 AC093259.1-201ENST00000509755 300 ntBASIC1.68□□□□□ -2.14
SHC1P29353 RNU6-991P-201ENST00000516168 107 ntBASIC1.68□□□□□ -2.14
SHC1P29353 MIR3124-201ENST00000582636 67 ntBASIC1.68□□□□□ -2.14
SHC1P29353 MIR4753-201ENST00000585119 83 ntBASIC1.68□□□□□ -2.14
SHC1P29353 AL031274.2-201ENST00000599419 203 ntBASIC1.68□□□□□ -2.14
SHC1P29353 AC025754.2-201ENST00000606491 432 ntBASIC1.68□□□□□ -2.14
SHC1P29353 AC022202.1-201ENST00000613515 211 ntBASIC1.68□□□□□ -2.14
SHC1P29353 AC141273.2-201ENST00000618989 130 ntBASIC1.68□□□□□ -2.14
SHC1P29353 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.68□□□□□ -2.14
SHC1P29353 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SHC1P29353 Y_RNA.44-201ENST00000362676 108 ntBASIC1.67□□□□□ -2.14
SHC1P29353 RNU4-80P-201ENST00000363200 141 ntBASIC1.67□□□□□ -2.14
SHC1P29353 Y_RNA.117-201ENST00000363294 101 ntBASIC1.67□□□□□ -2.14
SHC1P29353 RNU6-438P-201ENST00000365561 103 ntBASIC1.67□□□□□ -2.14
SHC1P29353 RNU6-662P-201ENST00000384253 104 ntBASIC1.67□□□□□ -2.14
SHC1P29353 Y_RNA.552-201ENST00000384665 112 ntBASIC1.67□□□□□ -2.14
SHC1P29353 MIR9-3-201ENST00000385084 90 ntBASIC1.67□□□□□ -2.14
SHC1P29353 U8.13-201ENST00000390842 128 ntBASIC1.67□□□□□ -2.14
SHC1P29353 SNORA40.19-201ENST00000390846 128 ntBASIC1.67□□□□□ -2.14
SHC1P29353 SNORA40.18-201ENST00000391200 128 ntBASIC1.67□□□□□ -2.14
SHC1P29353 TOMM22P2-201ENST00000430735 237 ntBASIC1.67□□□□□ -2.14
SHC1P29353 MTCO1P44-201ENST00000441935 243 ntBASIC1.67□□□□□ -2.14
SHC1P29353 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.67□□□□□ -2.14
SHC1P29353 RNA5SP233-201ENST00000459153 113 ntBASIC1.67□□□□□ -2.14
SHC1P29353 RNU6-191P-201ENST00000516295 94 ntBASIC1.67□□□□□ -2.14
SHC1P29353 SNORA27.4-201ENST00000516650 95 ntBASIC1.67□□□□□ -2.14
SHC1P29353 RNA5SP490-201ENST00000517141 136 ntBASIC1.67□□□□□ -2.14
SHC1P29353 RNU6-667P-201ENST00000517186 102 ntBASIC1.67□□□□□ -2.14
SHC1P29353 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.67□□□□□ -2.14
SHC1P29353 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.67□□□□□ -2.14
SHC1P29353 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.67□□□□□ -2.14
SHC1P29353 AC006380.1-201ENST00000603598 186 ntBASIC1.67□□□□□ -2.14
SHC1P29353 MIR6845-201ENST00000613182 61 ntBASIC1.67□□□□□ -2.14
SHC1P29353 U2.14-201ENST00000615943 113 ntBASIC1.67□□□□□ -2.14
SHC1P29353 snoZ196.1-201ENST00000625269 89 ntBASIC1.67□□□□□ -2.14
SHC1P29353 AC008555.8-201ENST00000623602 2168 ntBASIC1.66□□□□□ -2.14
SHC1P29353 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SHC1P29353 Y_RNA.122-201ENST00000363331 96 ntBASIC1.66□□□□□ -2.14
SHC1P29353 RNU6-324P-201ENST00000363957 106 ntBASIC1.66□□□□□ -2.14
SHC1P29353 Y_RNA.332-201ENST00000365271 113 ntBASIC1.66□□□□□ -2.14
SHC1P29353 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SHC1P29353 AC019129.1-201ENST00000403786 261 ntBASIC1.66□□□□□ -2.14
SHC1P29353 AL031003.1-201ENST00000404229 172 ntBASIC1.66□□□□□ -2.14
SHC1P29353 AL355796.1-201ENST00000406706 323 ntBASIC1.66□□□□□ -2.14
SHC1P29353 RNU6-847P-201ENST00000411115 108 ntBASIC1.66□□□□□ -2.14
SHC1P29353 RNU6-57P-201ENST00000411348 103 ntBASIC1.66□□□□□ -2.14
SHC1P29353 RNU6-221P-201ENST00000459541 99 ntBASIC1.66□□□□□ -2.14
SHC1P29353 AC010531.2-201ENST00000465012 153 ntBASIC1.66□□□□□ -2.14
SHC1P29353 RPL23AP63-201ENST00000498752 471 ntBASIC1.66□□□□□ -2.14
SHC1P29353 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.66□□□□□ -2.14
SHC1P29353 NDUFA5P6-201ENST00000542110 379 ntBASIC1.66□□□□□ -2.14
SHC1P29353 AC026271.5-201ENST00000577873 130 ntBASIC1.66□□□□□ -2.14
SHC1P29353 AC005828.6-201ENST00000606610 232 ntBASIC1.66□□□□□ -2.14
SHC1P29353 BX284668.6-201ENST00000606899 438 ntBASIC1.66□□□□□ -2.14
SHC1P29353 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.66□□□□□ -2.14
SHC1P29353 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SHC1P29353 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SHC1P29353 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.14
SHC1P29353 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
SHC1P29353 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
SHC1P29353 UBE2WP1-201ENST00000362030 340 ntBASIC1.65□□□□□ -2.15
SHC1P29353 SNORA25.1-201ENST00000362326 128 ntBASIC1.65□□□□□ -2.15
SHC1P29353 SNORA16.1-201ENST00000364597 132 ntBASIC1.65□□□□□ -2.15
SHC1P29353 Y_RNA.275-201ENST00000364726 110 ntBASIC1.65□□□□□ -2.15
SHC1P29353 Y_RNA.361-201ENST00000365515 120 ntBASIC1.65□□□□□ -2.15
SHC1P29353 MT-TR-201ENST00000387439 65 ntBASIC1.65□□□□□ -2.15
SHC1P29353 AL512604.1-201ENST00000404812 257 ntBASIC1.65□□□□□ -2.15
SHC1P29353 AL357139.1-201ENST00000407792 426 ntBASIC1.65□□□□□ -2.15
SHC1P29353 AC123900.1-201ENST00000420390 96 ntBASIC1.65□□□□□ -2.15
SHC1P29353 AL135790.2-201ENST00000437701 267 ntBASIC1.65□□□□□ -2.15
SHC1P29353 PRELID3BP1-201ENST00000457142 540 ntBASIC1.65□□□□□ -2.15
SHC1P29353 SNORD65B-201ENST00000459126 73 ntBASIC1.65□□□□□ -2.15
SHC1P29353 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.65□□□□□ -2.15
SHC1P29353 RNU6-948P-201ENST00000516374 107 ntBASIC1.65□□□□□ -2.15
SHC1P29353 AC025647.1-201ENST00000517879 253 ntBASIC1.65□□□□□ -2.15
SHC1P29353 MIR4287-201ENST00000579398 78 ntBASIC1.65□□□□□ -2.15
SHC1P29353 MIR3668-201ENST00000582138 75 ntBASIC1.65□□□□□ -2.15
SHC1P29353 AC011921.3-201ENST00000605540 361 ntBASIC1.65□□□□□ -2.15
SHC1P29353 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.65□□□□□ -2.15
SHC1P29353 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
SHC1P29353 Y_RNA.124-201ENST00000363339 93 ntBASIC1.64□□□□□ -2.15
SHC1P29353 Y_RNA.172-201ENST00000363765 102 ntBASIC1.64□□□□□ -2.15
SHC1P29353 RNU6-801P-201ENST00000364087 105 ntBASIC1.64□□□□□ -2.15
SHC1P29353 Y_RNA.217-201ENST00000364214 105 ntBASIC1.64□□□□□ -2.15
SHC1P29353 RNY1-201ENST00000364228 113 ntBASIC1.64□□□□□ -2.15
SHC1P29353 SNORD114-6-201ENST00000364393 72 ntBASIC1.64□□□□□ -2.15
SHC1P29353 SNORA20B-201ENST00000384220 132 ntBASIC1.64□□□□□ -2.15
SHC1P29353 RNU6-1289P-201ENST00000384431 106 ntBASIC1.64□□□□□ -2.15
SHC1P29353 MIR583-201ENST00000384846 75 ntBASIC1.64□□□□□ -2.15
SHC1P29353 RNU2-61P-201ENST00000411069 191 ntBASIC1.64□□□□□ -2.15
SHC1P29353 AC016909.1-201ENST00000415916 166 ntBASIC1.64□□□□□ -2.15
SHC1P29353 AL137159.1-201ENST00000452808 512 ntBASIC1.64□□□□□ -2.15
SHC1P29353 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.64□□□□□ -2.15
SHC1P29353 Y_RNA.641-201ENST00000459414 105 ntBASIC1.64□□□□□ -2.15
SHC1P29353 RPL23AP42-201ENST00000471152 471 ntBASIC1.64□□□□□ -2.15
SHC1P29353 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.64□□□□□ -2.15
SHC1P29353 SNORD116-28-201ENST00000516123 91 ntBASIC1.64□□□□□ -2.15
SHC1P29353 AC130289.1-201ENST00000577321 73 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms