Protein–RNA interactions for Protein: P19793

RXRA, Retinoic acid receptor RXR-alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRAP19793 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.06□□□□□ -2.08
RXRAP19793 SNORA20B-201ENST00000384220 132 ntBASIC2.06□□□□□ -2.08
RXRAP19793 RNU6-296P-201ENST00000384608 107 ntBASIC2.06□□□□□ -2.08
RXRAP19793 Y_RNA.556-201ENST00000384677 113 ntBASIC2.06□□□□□ -2.08
RXRAP19793 AL355796.1-201ENST00000406706 323 ntBASIC2.06□□□□□ -2.08
RXRAP19793 AC069257.2-201ENST00000441819 155 ntBASIC2.06□□□□□ -2.08
RXRAP19793 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.06□□□□□ -2.08
RXRAP19793 RNU6-237P-201ENST00000515985 71 ntBASIC2.06□□□□□ -2.08
RXRAP19793 RNA5SP182-201ENST00000516064 82 ntBASIC2.06□□□□□ -2.08
RXRAP19793 AC084364.2-201ENST00000546924 395 ntBASIC2.06□□□□□ -2.08
RXRAP19793 AC006006.1-201ENST00000603082 144 ntBASIC2.06□□□□□ -2.08
RXRAP19793 AC012493.3-201ENST00000604494 112 ntBASIC2.06□□□□□ -2.08
RXRAP19793 AL627230.6-201ENST00000611129 280 ntBASIC2.06□□□□□ -2.08
RXRAP19793 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.06□□□□□ -2.08
RXRAP19793 U6.108-201ENST00000637764 58 ntBASIC2.06□□□□□ -2.08
RXRAP19793 AC010615.1-201ENST00000594254 1764 ntBASIC2.05□□□□□ -2.08
RXRAP19793 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
RXRAP19793 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
RXRAP19793 Y_RNA.64-201ENST00000362845 102 ntBASIC2.05□□□□□ -2.08
RXRAP19793 Y_RNA.222-201ENST00000364264 102 ntBASIC2.05□□□□□ -2.08
RXRAP19793 Y_RNA.396-201ENST00000383949 103 ntBASIC2.05□□□□□ -2.08
RXRAP19793 Y_RNA.461-201ENST00000384263 103 ntBASIC2.05□□□□□ -2.08
RXRAP19793 MIR764-201ENST00000390811 85 ntBASIC2.05□□□□□ -2.08
RXRAP19793 RNU2-54P-201ENST00000410299 190 ntBASIC2.05□□□□□ -2.08
RXRAP19793 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.05□□□□□ -2.08
RXRAP19793 HMGN2P19-201ENST00000425149 265 ntBASIC2.05□□□□□ -2.08
RXRAP19793 RPS26P45-201ENST00000471748 340 ntBASIC2.05□□□□□ -2.08
RXRAP19793 RN7SL274P-201ENST00000492268 272 ntBASIC2.05□□□□□ -2.08
RXRAP19793 RNU6-1143P-201ENST00000516125 104 ntBASIC2.05□□□□□ -2.08
RXRAP19793 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.05□□□□□ -2.08
RXRAP19793 AC008749.1-201ENST00000597650 306 ntBASIC2.05□□□□□ -2.08
RXRAP19793 AL359075.3-201ENST00000613288 217 ntBASIC2.05□□□□□ -2.08
RXRAP19793 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
RXRAP19793 AC245060.5-201ENST00000610778 3293 ntBASIC2.04□□□□□ -2.08
RXRAP19793 SNORA27.1-201ENST00000362604 124 ntBASIC2.04□□□□□ -2.08
RXRAP19793 Y_RNA.105-201ENST00000363182 111 ntBASIC2.04□□□□□ -2.08
RXRAP19793 SNORA33-201ENST00000363664 130 ntBASIC2.04□□□□□ -2.08
RXRAP19793 RNU6-271P-201ENST00000363858 105 ntBASIC2.04□□□□□ -2.08
RXRAP19793 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
RXRAP19793 Y_RNA.439-201ENST00000384119 94 ntBASIC2.04□□□□□ -2.08
RXRAP19793 Y_RNA.570-201ENST00000384750 101 ntBASIC2.04□□□□□ -2.08
RXRAP19793 RNA5SP467-201ENST00000391274 118 ntBASIC2.04□□□□□ -2.08
RXRAP19793 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.04□□□□□ -2.08
RXRAP19793 AC005002.2-201ENST00000438228 269 ntBASIC2.04□□□□□ -2.08
RXRAP19793 RPL23AP6-201ENST00000446637 472 ntBASIC2.04□□□□□ -2.08
RXRAP19793 LINC01399-202ENST00000458450 244 ntBASIC2.04□□□□□ -2.08
RXRAP19793 AC107393.1-201ENST00000512403 346 ntBASIC2.04□□□□□ -2.08
RXRAP19793 Y_RNA.668-201ENST00000516233 93 ntBASIC2.04□□□□□ -2.08
RXRAP19793 RNU7-128P-201ENST00000517247 62 ntBASIC2.04□□□□□ -2.08
RXRAP19793 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.04□□□□□ -2.08
RXRAP19793 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.04□□□□□ -2.08
RXRAP19793 MIR4713-201ENST00000582691 75 ntBASIC2.04□□□□□ -2.08
RXRAP19793 AL096840.1-201ENST00000603287 93 ntBASIC2.04□□□□□ -2.08
RXRAP19793 AC022441.3-201ENST00000605737 136 ntBASIC2.04□□□□□ -2.08
RXRAP19793 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.04□□□□□ -2.08
RXRAP19793 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
RXRAP19793 Y_RNA.101-201ENST00000363154 102 ntBASIC2.03□□□□□ -2.08
RXRAP19793 SNORD115-30-201ENST00000364117 82 ntBASIC2.03□□□□□ -2.08
RXRAP19793 SNORD48-201ENST00000364953 64 ntBASIC2.03□□□□□ -2.08
RXRAP19793 SNORD63-201ENST00000384262 68 ntBASIC2.03□□□□□ -2.08
RXRAP19793 RNU6-472P-201ENST00000384299 107 ntBASIC2.03□□□□□ -2.08
RXRAP19793 MIR520A-201ENST00000384862 85 ntBASIC2.03□□□□□ -2.08
RXRAP19793 RNU6-121P-201ENST00000410525 99 ntBASIC2.03□□□□□ -2.08
RXRAP19793 Y_RNA.618-201ENST00000410949 107 ntBASIC2.03□□□□□ -2.08
RXRAP19793 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.03□□□□□ -2.08
RXRAP19793 AL390729.2-201ENST00000416137 156 ntBASIC2.03□□□□□ -2.08
RXRAP19793 MRPS10P1-201ENST00000448483 130 ntBASIC2.03□□□□□ -2.08
RXRAP19793 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RXRAP19793 AC025465.3-201ENST00000510570 311 ntBASIC2.03□□□□□ -2.08
RXRAP19793 AP003733.2-201ENST00000529409 171 ntBASIC2.03□□□□□ -2.08
RXRAP19793 Y_RNA.288-201ENST00000364854 92 ntBASIC2.02□□□□□ -2.09
RXRAP19793 Y_RNA.376-201ENST00000365638 108 ntBASIC2.02□□□□□ -2.09
RXRAP19793 Y_RNA.483-201ENST00000384380 101 ntBASIC2.02□□□□□ -2.09
RXRAP19793 MT-TW-201ENST00000387382 68 ntBASIC2.02□□□□□ -2.09
RXRAP19793 AL627390.1-201ENST00000396055 340 ntBASIC2.02□□□□□ -2.09
RXRAP19793 MIR873-201ENST00000401120 77 ntBASIC2.02□□□□□ -2.09
RXRAP19793 MIR1302-6-201ENST00000408466 90 ntBASIC2.02□□□□□ -2.09
RXRAP19793 RNU5A-5P-201ENST00000411054 116 ntBASIC2.02□□□□□ -2.09
RXRAP19793 RNU6-1199P-201ENST00000411249 104 ntBASIC2.02□□□□□ -2.09
RXRAP19793 RPL21P38-201ENST00000418090 167 ntBASIC2.02□□□□□ -2.09
RXRAP19793 MRPS17P9-201ENST00000511924 393 ntBASIC2.02□□□□□ -2.09
RXRAP19793 RNU7-99P-201ENST00000516271 62 ntBASIC2.02□□□□□ -2.09
RXRAP19793 RNU1-142P-201ENST00000516682 145 ntBASIC2.02□□□□□ -2.09
RXRAP19793 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.02□□□□□ -2.09
RXRAP19793 AC136932.1-201ENST00000574771 208 ntBASIC2.02□□□□□ -2.09
RXRAP19793 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.02□□□□□ -2.09
RXRAP19793 MIR4438-201ENST00000585271 93 ntBASIC2.02□□□□□ -2.09
RXRAP19793 AC006380.1-201ENST00000603598 186 ntBASIC2.02□□□□□ -2.09
RXRAP19793 MIR376A1-201ENST00000616574 68 ntBASIC2.02□□□□□ -2.09
RXRAP19793 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.01□□□□□ -2.09
RXRAP19793 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
RXRAP19793 Y_RNA.143-201ENST00000363520 106 ntBASIC2.01□□□□□ -2.09
RXRAP19793 Y_RNA.188-201ENST00000363952 111 ntBASIC2.01□□□□□ -2.09
RXRAP19793 RNA5SP57-201ENST00000459463 123 ntBASIC2.01□□□□□ -2.09
RXRAP19793 SNORA31.17-201ENST00000516953 127 ntBASIC2.01□□□□□ -2.09
RXRAP19793 RNU6-250P-201ENST00000516958 103 ntBASIC2.01□□□□□ -2.09
RXRAP19793 RNU6-570P-201ENST00000517051 105 ntBASIC2.01□□□□□ -2.09
RXRAP19793 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
RXRAP19793 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.01□□□□□ -2.09
RXRAP19793 MIR4300-201ENST00000581016 96 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 298 ms