Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC011921.3-201ENST00000605540 361 ntBASIC3.19□□□□□ -1.9
ERCC3P19447 Y_RNA.802-201ENST00000614892 130 ntBASIC3.19□□□□□ -1.9
ERCC3P19447 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
ERCC3P19447 RNU1-138P-201ENST00000384093 164 ntBASIC3.18□□□□□ -1.9
ERCC3P19447 SNORA8.3-201ENST00000384679 139 ntBASIC3.18□□□□□ -1.9
ERCC3P19447 CST2P1-201ENST00000425770 87 ntBASIC3.18□□□□□ -1.9
ERCC3P19447 TRBV12-1-201ENST00000479785 344 ntBASIC3.18□□□□□ -1.9
ERCC3P19447 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.18□□□□□ -1.9
ERCC3P19447 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.18□□□□□ -1.9
ERCC3P19447 RNU6-1096P-201ENST00000517089 102 ntBASIC3.18□□□□□ -1.9
ERCC3P19447 MIR5094-201ENST00000578766 85 ntBASIC3.18□□□□□ -1.9
ERCC3P19447 AC005786.1-201ENST00000588553 154 ntBASIC3.18□□□□□ -1.9
ERCC3P19447 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ERCC3P19447 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
ERCC3P19447 Y_RNA.24-201ENST00000362508 103 ntBASIC3.17□□□□□ -1.9
ERCC3P19447 SNORA3A-201ENST00000364113 130 ntBASIC3.17□□□□□ -1.9
ERCC3P19447 RNU6-1323P-201ENST00000384025 107 ntBASIC3.17□□□□□ -1.9
ERCC3P19447 MIR515-2-201ENST00000384883 83 ntBASIC3.17□□□□□ -1.9
ERCC3P19447 MIR515-1-201ENST00000384884 83 ntBASIC3.17□□□□□ -1.9
ERCC3P19447 HMGN2P39-201ENST00000398005 273 ntBASIC3.17□□□□□ -1.9
ERCC3P19447 AL355497.1-201ENST00000406262 551 ntBASIC3.17□□□□□ -1.9
ERCC3P19447 AC018634.1-201ENST00000437554 401 ntBASIC3.17□□□□□ -1.9
ERCC3P19447 RPS4XP11-201ENST00000446897 772 ntBASIC3.17□□□□□ -1.9
ERCC3P19447 AC091021.1-201ENST00000468051 388 ntBASIC3.17□□□□□ -1.9
ERCC3P19447 RPL36AP21-201ENST00000490372 323 ntBASIC3.17□□□□□ -1.9
ERCC3P19447 Y_RNA.700-201ENST00000516806 100 ntBASIC3.17□□□□□ -1.9
ERCC3P19447 MIR4724-201ENST00000579485 89 ntBASIC3.17□□□□□ -1.9
ERCC3P19447 AP003357.1-201ENST00000604497 148 ntBASIC3.17□□□□□ -1.9
ERCC3P19447 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.17□□□□□ -1.9
ERCC3P19447 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
ERCC3P19447 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
ERCC3P19447 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.16□□□□□ -1.9
ERCC3P19447 RNU1-35P-201ENST00000362782 153 ntBASIC3.16□□□□□ -1.9
ERCC3P19447 RNU6-47P-201ENST00000383866 107 ntBASIC3.16□□□□□ -1.9
ERCC3P19447 MIR181B1-201ENST00000385240 110 ntBASIC3.16□□□□□ -1.9
ERCC3P19447 AL117342.1-201ENST00000404861 406 ntBASIC3.16□□□□□ -1.9
ERCC3P19447 RNU6-383P-201ENST00000410864 94 ntBASIC3.16□□□□□ -1.9
ERCC3P19447 COX6CP10-201ENST00000416832 224 ntBASIC3.16□□□□□ -1.9
ERCC3P19447 AC099677.2-201ENST00000436385 175 ntBASIC3.16□□□□□ -1.9
ERCC3P19447 AL163195.1-201ENST00000496941 348 ntBASIC3.16□□□□□ -1.9
ERCC3P19447 RNU6-1291P-201ENST00000516591 104 ntBASIC3.16□□□□□ -1.9
ERCC3P19447 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.16□□□□□ -1.9
ERCC3P19447 AC021269.2-201ENST00000532318 330 ntBASIC3.16□□□□□ -1.9
ERCC3P19447 AC004486.1-201ENST00000546846 233 ntBASIC3.16□□□□□ -1.9
ERCC3P19447 AC091544.4-201ENST00000555268 342 ntBASIC3.16□□□□□ -1.9
ERCC3P19447 AC004792.1-201ENST00000614523 137 ntBASIC3.16□□□□□ -1.9
ERCC3P19447 RNU4-17P-201ENST00000365598 141 ntBASIC3.15□□□□□ -1.91
ERCC3P19447 RNU6-144P-201ENST00000383951 107 ntBASIC3.15□□□□□ -1.91
ERCC3P19447 MIR512-1-201ENST00000384913 84 ntBASIC3.15□□□□□ -1.91
ERCC3P19447 RNA5SP508-201ENST00000411327 119 ntBASIC3.15□□□□□ -1.91
ERCC3P19447 AC022559.1-201ENST00000520905 205 ntBASIC3.15□□□□□ -1.91
ERCC3P19447 AC011604.1-201ENST00000545978 196 ntBASIC3.15□□□□□ -1.91
ERCC3P19447 AC127455.1-201ENST00000565496 145 ntBASIC3.15□□□□□ -1.91
ERCC3P19447 MIR3670-2-201ENST00000582974 65 ntBASIC3.15□□□□□ -1.91
ERCC3P19447 MIR3670-1-201ENST00000584160 65 ntBASIC3.15□□□□□ -1.91
ERCC3P19447 MIR3670-3-201ENST00000584855 65 ntBASIC3.15□□□□□ -1.91
ERCC3P19447 AL049779.4-201ENST00000604500 156 ntBASIC3.15□□□□□ -1.91
ERCC3P19447 MIR3670-4-201ENST00000612260 65 ntBASIC3.15□□□□□ -1.91
ERCC3P19447 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.15□□□□□ -1.91
ERCC3P19447 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ERCC3P19447 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
ERCC3P19447 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ERCC3P19447 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
ERCC3P19447 RNU6-653P-201ENST00000363074 106 ntBASIC3.14□□□□□ -1.91
ERCC3P19447 RNA5SP68-201ENST00000363885 119 ntBASIC3.14□□□□□ -1.91
ERCC3P19447 RNU6-969P-201ENST00000383900 105 ntBASIC3.14□□□□□ -1.91
ERCC3P19447 Y_RNA.785-201ENST00000384290 109 ntBASIC3.14□□□□□ -1.91
ERCC3P19447 MIR520G-201ENST00000385064 90 ntBASIC3.14□□□□□ -1.91
ERCC3P19447 RPS29P6-201ENST00000438196 145 ntBASIC3.14□□□□□ -1.91
ERCC3P19447 AL513328.1-201ENST00000446460 224 ntBASIC3.14□□□□□ -1.91
ERCC3P19447 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.14□□□□□ -1.91
ERCC3P19447 AC107393.1-201ENST00000512403 346 ntBASIC3.14□□□□□ -1.91
ERCC3P19447 MIR4446-201ENST00000578505 67 ntBASIC3.14□□□□□ -1.91
ERCC3P19447 AC069114.2-201ENST00000604699 304 ntBASIC3.14□□□□□ -1.91
ERCC3P19447 MIR6817-201ENST00000615588 66 ntBASIC3.14□□□□□ -1.91
ERCC3P19447 MIR6079-201ENST00000635807 62 ntBASIC3.14□□□□□ -1.91
ERCC3P19447 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.14□□□□□ -1.91
ERCC3P19447 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.13□□□□□ -1.91
ERCC3P19447 ZNF271P-202ENST00000465539 1970 ntBASIC3.13□□□□□ -1.91
ERCC3P19447 RNU4-41P-201ENST00000364426 143 ntBASIC3.13□□□□□ -1.91
ERCC3P19447 Y_RNA.270-201ENST00000364693 104 ntBASIC3.13□□□□□ -1.91
ERCC3P19447 SNORA72-201ENST00000384339 132 ntBASIC3.13□□□□□ -1.91
ERCC3P19447 Y_RNA.572-201ENST00000384757 98 ntBASIC3.13□□□□□ -1.91
ERCC3P19447 RNA5SP465-201ENST00000391195 109 ntBASIC3.13□□□□□ -1.91
ERCC3P19447 AL451074.5-201ENST00000415894 435 ntBASIC3.13□□□□□ -1.91
ERCC3P19447 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.13□□□□□ -1.91
ERCC3P19447 RNU6-437P-201ENST00000459408 95 ntBASIC3.13□□□□□ -1.91
ERCC3P19447 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.13□□□□□ -1.91
ERCC3P19447 RNU7-193P-201ENST00000516723 65 ntBASIC3.13□□□□□ -1.91
ERCC3P19447 AC100767.1-201ENST00000528178 123 ntBASIC3.13□□□□□ -1.91
ERCC3P19447 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ERCC3P19447 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
ERCC3P19447 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
ERCC3P19447 AC018630.2-201ENST00000534866 2403 ntBASIC3.12□□□□□ -1.91
ERCC3P19447 RNU4-70P-201ENST00000384579 139 ntBASIC3.12□□□□□ -1.91
ERCC3P19447 RNU2-2P-201ENST00000410396 191 ntBASIC3.12□□□□□ -1.91
ERCC3P19447 AC024995.1-201ENST00000523014 93 ntBASIC3.12□□□□□ -1.91
ERCC3P19447 ZNF861P-201ENST00000588126 639 ntBASIC3.12□□□□□ -1.91
ERCC3P19447 AL929325.1-201ENST00000603096 117 ntBASIC3.12□□□□□ -1.91
ERCC3P19447 RNU2-4P-201ENST00000606190 192 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms