Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 RNU1-139P-201ENST00000391307 165 ntBASIC0.21□□□□□ -2.38
ATF1P18846 RNU6-177P-201ENST00000411257 104 ntBASIC0.21□□□□□ -2.38
ATF1P18846 RNU6-1304P-201ENST00000411374 106 ntBASIC0.21□□□□□ -2.38
ATF1P18846 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.21□□□□□ -2.38
ATF1P18846 AL392103.1-201ENST00000447000 198 ntBASIC0.21□□□□□ -2.38
ATF1P18846 snoU13.21-201ENST00000459368 105 ntBASIC0.21□□□□□ -2.38
ATF1P18846 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.21□□□□□ -2.38
ATF1P18846 SNORA18.7-201ENST00000516910 131 ntBASIC0.21□□□□□ -2.38
ATF1P18846 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.21□□□□□ -2.38
ATF1P18846 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.21□□□□□ -2.38
ATF1P18846 MIR3124-201ENST00000582636 67 ntBASIC0.21□□□□□ -2.38
ATF1P18846 MIR3942-201ENST00000585264 109 ntBASIC0.21□□□□□ -2.38
ATF1P18846 AC005828.6-201ENST00000606610 232 ntBASIC0.21□□□□□ -2.38
ATF1P18846 AL591926.4-201ENST00000616895 298 ntBASIC0.21□□□□□ -2.38
ATF1P18846 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
ATF1P18846 AC073544.1-201ENST00000600110 1595 ntBASIC0.2□□□□□ -2.38
ATF1P18846 MTND5P26-201ENST00000426018 1752 ntBASIC0.2□□□□□ -2.38
ATF1P18846 Y_RNA.106-201ENST00000363189 100 ntBASIC0.2□□□□□ -2.38
ATF1P18846 Y_RNA.256-201ENST00000364594 104 ntBASIC0.2□□□□□ -2.38
ATF1P18846 VTRNA1-3-201ENST00000365645 89 ntBASIC0.2□□□□□ -2.38
ATF1P18846 RNU6-1264P-201ENST00000383891 107 ntBASIC0.2□□□□□ -2.38
ATF1P18846 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.2□□□□□ -2.38
ATF1P18846 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.2□□□□□ -2.38
ATF1P18846 RNA5SP511-201ENST00000410487 115 ntBASIC0.2□□□□□ -2.38
ATF1P18846 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.2□□□□□ -2.38
ATF1P18846 NDUFA4P2-201ENST00000489989 244 ntBASIC0.2□□□□□ -2.38
ATF1P18846 RNU6-1114P-201ENST00000516022 107 ntBASIC0.2□□□□□ -2.38
ATF1P18846 RNU6-1278P-201ENST00000516130 107 ntBASIC0.2□□□□□ -2.38
ATF1P18846 Y_RNA.704-201ENST00000516851 102 ntBASIC0.2□□□□□ -2.38
ATF1P18846 RNU6-1223P-201ENST00000517124 104 ntBASIC0.2□□□□□ -2.38
ATF1P18846 AL358944.1-201ENST00000528537 144 ntBASIC0.2□□□□□ -2.38
ATF1P18846 MIR4711-201ENST00000578274 70 ntBASIC0.2□□□□□ -2.38
ATF1P18846 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.2□□□□□ -2.38
ATF1P18846 MIR4764-201ENST00000580680 88 ntBASIC0.2□□□□□ -2.38
ATF1P18846 MIR4300-201ENST00000581016 96 ntBASIC0.2□□□□□ -2.38
ATF1P18846 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
ATF1P18846 AC121247.2-201ENST00000604776 136 ntBASIC0.2□□□□□ -2.38
ATF1P18846 AL391262.2-201ENST00000622466 494 ntBASIC0.2□□□□□ -2.38
ATF1P18846 AC127459.3-201ENST00000624328 466 ntBASIC0.2□□□□□ -2.38
ATF1P18846 MIR103A1-201ENST00000362165 78 ntBASIC0.19□□□□□ -2.38
ATF1P18846 Y_RNA.172-201ENST00000363765 102 ntBASIC0.19□□□□□ -2.38
ATF1P18846 RNU5F-3P-201ENST00000363767 117 ntBASIC0.19□□□□□ -2.38
ATF1P18846 RNU6-595P-201ENST00000363944 107 ntBASIC0.19□□□□□ -2.38
ATF1P18846 SNORD113.3-201ENST00000364630 78 ntBASIC0.19□□□□□ -2.38
ATF1P18846 RNU6-842P-201ENST00000384269 107 ntBASIC0.19□□□□□ -2.38
ATF1P18846 MIR520G-201ENST00000385064 90 ntBASIC0.19□□□□□ -2.38
ATF1P18846 RNU6-908P-201ENST00000410160 94 ntBASIC0.19□□□□□ -2.38
ATF1P18846 AL354751.2-201ENST00000415471 210 ntBASIC0.19□□□□□ -2.38
ATF1P18846 EIF1P2-201ENST00000428233 350 ntBASIC0.19□□□□□ -2.38
ATF1P18846 AC015818.7-201ENST00000428754 109 ntBASIC0.19□□□□□ -2.38
ATF1P18846 DLGAP5P1-201ENST00000430307 464 ntBASIC0.19□□□□□ -2.38
ATF1P18846 AC087499.7-201ENST00000441958 109 ntBASIC0.19□□□□□ -2.38
ATF1P18846 AC010424.1-201ENST00000506336 297 ntBASIC0.19□□□□□ -2.38
ATF1P18846 ACA59.1-201ENST00000515966 143 ntBASIC0.19□□□□□ -2.38
ATF1P18846 Y_RNA.693-201ENST00000516641 110 ntBASIC0.19□□□□□ -2.38
ATF1P18846 RNU6-256P-201ENST00000516747 97 ntBASIC0.19□□□□□ -2.38
ATF1P18846 AL158211.1-201ENST00000566763 763 ntBASIC0.19□□□□□ -2.38
ATF1P18846 AC092954.2-201ENST00000609103 430 ntBASIC0.19□□□□□ -2.38
ATF1P18846 AC019193.3-201ENST00000609144 554 ntBASIC0.19□□□□□ -2.38
ATF1P18846 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.19□□□□□ -2.38
ATF1P18846 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.19□□□□□ -2.38
ATF1P18846 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.18□□□□□ -2.38
ATF1P18846 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
ATF1P18846 SNORD14.1-201ENST00000365609 90 ntBASIC0.18□□□□□ -2.38
ATF1P18846 RNU6-1145P-201ENST00000384246 107 ntBASIC0.18□□□□□ -2.38
ATF1P18846 RNU6-1119P-201ENST00000384349 108 ntBASIC0.18□□□□□ -2.38
ATF1P18846 MIR499A-201ENST00000384903 122 ntBASIC0.18□□□□□ -2.38
ATF1P18846 SNORD28B-201ENST00000390993 75 ntBASIC0.18□□□□□ -2.38
ATF1P18846 MTCO3P40-201ENST00000392516 676 ntBASIC0.18□□□□□ -2.38
ATF1P18846 MIR873-201ENST00000401120 77 ntBASIC0.18□□□□□ -2.38
ATF1P18846 MIR936-201ENST00000401264 98 ntBASIC0.18□□□□□ -2.38
ATF1P18846 MTCYBP4-201ENST00000401524 249 ntBASIC0.18□□□□□ -2.38
ATF1P18846 RNU6-1148P-201ENST00000410992 104 ntBASIC0.18□□□□□ -2.38
ATF1P18846 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.18□□□□□ -2.38
ATF1P18846 MTND2P9-201ENST00000422293 931 ntBASIC0.18□□□□□ -2.38
ATF1P18846 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.18□□□□□ -2.38
ATF1P18846 USP9YP16-201ENST00000430287 407 ntBASIC0.18□□□□□ -2.38
ATF1P18846 SNRPGP10-201ENST00000432323 225 ntBASIC0.18□□□□□ -2.38
ATF1P18846 UQCRBP2-201ENST00000447827 297 ntBASIC0.18□□□□□ -2.38
ATF1P18846 USP9YP23-201ENST00000455085 407 ntBASIC0.18□□□□□ -2.38
ATF1P18846 AC108740.1-201ENST00000498629 225 ntBASIC0.18□□□□□ -2.38
ATF1P18846 RNU6-405P-201ENST00000516637 110 ntBASIC0.18□□□□□ -2.38
ATF1P18846 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.18□□□□□ -2.38
ATF1P18846 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.18□□□□□ -2.38
ATF1P18846 AC124303.1-201ENST00000605703 360 ntBASIC0.18□□□□□ -2.38
ATF1P18846 AL359880.1-201ENST00000621879 266 ntBASIC0.18□□□□□ -2.38
ATF1P18846 AC090582.1-201ENST00000636321 199 ntBASIC0.18□□□□□ -2.38
ATF1P18846 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.18□□□□□ -2.38
ATF1P18846 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
ATF1P18846 Y_RNA.38-201ENST00000362617 102 ntBASIC0.17□□□□□ -2.38
ATF1P18846 RNU6-451P-201ENST00000362921 107 ntBASIC0.17□□□□□ -2.38
ATF1P18846 RNY1P16-201ENST00000363063 111 ntBASIC0.17□□□□□ -2.38
ATF1P18846 RNU6-1085P-201ENST00000363576 107 ntBASIC0.17□□□□□ -2.38
ATF1P18846 U8.5-201ENST00000364528 136 ntBASIC0.17□□□□□ -2.38
ATF1P18846 Y_RNA.361-201ENST00000365515 120 ntBASIC0.17□□□□□ -2.38
ATF1P18846 AC117470.1-201ENST00000381974 330 ntBASIC0.17□□□□□ -2.38
ATF1P18846 RNU6-483P-201ENST00000384088 108 ntBASIC0.17□□□□□ -2.38
ATF1P18846 Y_RNA.473-201ENST00000384333 102 ntBASIC0.17□□□□□ -2.38
ATF1P18846 RNU6-342P-201ENST00000384521 104 ntBASIC0.17□□□□□ -2.38
ATF1P18846 RNA5SP193-201ENST00000410353 107 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms