Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 SNRPGP3-201ENST00000469405 227 ntBASIC2.56□□□□□ -2
COL11A2P13942 AC108729.3-201ENST00000513484 108 ntBASIC2.56□□□□□ -2
COL11A2P13942 MIR4724-201ENST00000579485 89 ntBASIC2.56□□□□□ -2
COL11A2P13942 MIR3609-201ENST00000582661 80 ntBASIC2.56□□□□□ -2
COL11A2P13942 AL137847.3-201ENST00000611521 109 ntBASIC2.56□□□□□ -2
COL11A2P13942 MIR6844-201ENST00000637122 62 ntBASIC2.56□□□□□ -2
COL11A2P13942 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
COL11A2P13942 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.55□□□□□ -2
COL11A2P13942 RNU6-199P-201ENST00000362954 107 ntBASIC2.55□□□□□ -2
COL11A2P13942 RNU6-1048P-201ENST00000364054 107 ntBASIC2.55□□□□□ -2
COL11A2P13942 Y_RNA.273-201ENST00000364703 102 ntBASIC2.55□□□□□ -2
COL11A2P13942 RNU1-57P-201ENST00000384491 166 ntBASIC2.55□□□□□ -2
COL11A2P13942 RNU6-750P-201ENST00000390946 107 ntBASIC2.55□□□□□ -2
COL11A2P13942 SNORA48.3-201ENST00000391081 134 ntBASIC2.55□□□□□ -2
COL11A2P13942 HMGN2P20-201ENST00000437531 273 ntBASIC2.55□□□□□ -2
COL11A2P13942 AC114982.1-201ENST00000469402 321 ntBASIC2.55□□□□□ -2
COL11A2P13942 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.55□□□□□ -2
COL11A2P13942 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.55□□□□□ -2
COL11A2P13942 RPL17P51-201ENST00000605218 238 ntBASIC2.55□□□□□ -2
COL11A2P13942 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
COL11A2P13942 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.55□□□□□ -2
COL11A2P13942 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL11A2P13942 AC131280.1-202ENST00000624067 4211 ntBASIC2.54□□□□□ -2
COL11A2P13942 DEFA7P-201ENST00000382676 285 ntBASIC2.54□□□□□ -2
COL11A2P13942 MIR569-201ENST00000385228 96 ntBASIC2.54□□□□□ -2
COL11A2P13942 RNU6-1228P-201ENST00000391014 107 ntBASIC2.54□□□□□ -2
COL11A2P13942 SNORA26.7-201ENST00000391288 122 ntBASIC2.54□□□□□ -2
COL11A2P13942 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.54□□□□□ -2
COL11A2P13942 SNORA25.12-201ENST00000516202 82 ntBASIC2.54□□□□□ -2
COL11A2P13942 RNU6-1007P-201ENST00000516586 107 ntBASIC2.54□□□□□ -2
COL11A2P13942 AL391813.1-201ENST00000603098 260 ntBASIC2.54□□□□□ -2
COL11A2P13942 Y_RNA.802-201ENST00000614892 130 ntBASIC2.54□□□□□ -2
COL11A2P13942 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.54□□□□□ -2
COL11A2P13942 AL161431.1-201ENST00000618966 4205 ntBASIC2.54□□□□□ -2
COL11A2P13942 AC080128.1-201ENST00000474389 1917 ntBASIC2.54□□□□□ -2
COL11A2P13942 Y_RNA.127-201ENST00000363386 109 ntBASIC2.54□□□□□ -2
COL11A2P13942 RNY3P5-201ENST00000384127 102 ntBASIC2.54□□□□□ -2
COL11A2P13942 Y_RNA.572-201ENST00000384757 98 ntBASIC2.54□□□□□ -2
COL11A2P13942 MIR583-201ENST00000384846 75 ntBASIC2.54□□□□□ -2
COL11A2P13942 MIR9-3-201ENST00000385084 90 ntBASIC2.54□□□□□ -2
COL11A2P13942 MIR616-201ENST00000385293 97 ntBASIC2.54□□□□□ -2
COL11A2P13942 MIR1278-201ENST00000408753 81 ntBASIC2.54□□□□□ -2
COL11A2P13942 HMGN2P16-201ENST00000456802 261 ntBASIC2.54□□□□□ -2
COL11A2P13942 RNU7-23P-201ENST00000459465 62 ntBASIC2.54□□□□□ -2
COL11A2P13942 AC006483.1-201ENST00000487308 313 ntBASIC2.54□□□□□ -2
COL11A2P13942 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.54□□□□□ -2
COL11A2P13942 AC107027.2-201ENST00000512197 115 ntBASIC2.54□□□□□ -2
COL11A2P13942 RNU6-919P-201ENST00000516731 104 ntBASIC2.54□□□□□ -2
COL11A2P13942 RNU6-971P-201ENST00000516920 106 ntBASIC2.54□□□□□ -2
COL11A2P13942 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.54□□□□□ -2
COL11A2P13942 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.54□□□□□ -2
COL11A2P13942 snoU13.31-201ENST00000607291 104 ntBASIC2.54□□□□□ -2
COL11A2P13942 AC005562.2-201ENST00000618264 111 ntBASIC2.54□□□□□ -2
COL11A2P13942 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
COL11A2P13942 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
COL11A2P13942 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.53□□□□□ -2
COL11A2P13942 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.53□□□□□ -2
COL11A2P13942 Y_RNA.24-201ENST00000362508 103 ntBASIC2.53□□□□□ -2
COL11A2P13942 RNU6-588P-201ENST00000410281 105 ntBASIC2.53□□□□□ -2
COL11A2P13942 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.53□□□□□ -2
COL11A2P13942 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.53□□□□□ -2
COL11A2P13942 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.53□□□□□ -2.01
COL11A2P13942 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL11A2P13942 U3.8-201ENST00000363675 217 ntBASIC2.52□□□□□ -2.01
COL11A2P13942 RNU6-457P-201ENST00000363999 107 ntBASIC2.52□□□□□ -2.01
COL11A2P13942 MIR586-201ENST00000385035 97 ntBASIC2.52□□□□□ -2.01
COL11A2P13942 MIR591-201ENST00000385290 95 ntBASIC2.52□□□□□ -2.01
COL11A2P13942 AL606845.1-201ENST00000404881 255 ntBASIC2.52□□□□□ -2.01
COL11A2P13942 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.52□□□□□ -2.01
COL11A2P13942 AL121914.1-201ENST00000450188 156 ntBASIC2.52□□□□□ -2.01
COL11A2P13942 AC092991.1-201ENST00000477176 376 ntBASIC2.52□□□□□ -2.01
COL11A2P13942 RNU7-115P-201ENST00000516433 55 ntBASIC2.52□□□□□ -2.01
COL11A2P13942 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL11A2P13942 AC068700.1-201ENST00000565862 3754 ntBASIC2.52□□□□□ -2.01
COL11A2P13942 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.52□□□□□ -2.01
COL11A2P13942 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
COL11A2P13942 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL11A2P13942 Y_RNA.172-201ENST00000363765 102 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 RNU4-11P-201ENST00000365287 132 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 MIR548B-201ENST00000385247 97 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 RNA5SP504-201ENST00000410676 117 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 TOMM22P2-201ENST00000430735 237 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
COL11A2P13942 SNORD65B-201ENST00000459126 73 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 AC145146.1-201ENST00000496370 254 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 POLR3GP1-201ENST00000594073 261 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 TUG1_4.1-201ENST00000619464 181 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 AC010297.1-201ENST00000623948 149 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 ZNF702P-202ENST00000434269 1966 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.51□□□□□ -2.01
COL11A2P13942 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.51□□□□□ -2.01
COL11A2P13942 U8.7-201ENST00000364940 136 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 RNU6-1264P-201ENST00000383891 107 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 SNORA20-201ENST00000384662 132 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 RNU6-768P-201ENST00000384683 107 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 MIR15B-201ENST00000385045 98 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 MIR526A2-201ENST00000390198 65 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 RNU2-37P-201ENST00000410695 177 ntBASIC2.51□□□□□ -2.01
COL11A2P13942 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.51□□□□□ -2.01
COL11A2P13942 RPL39P40-201ENST00000445481 146 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms