Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC002429.1-201ENST00000437672 148 ntBASIC0.66□□□□□ -2.3
CD28P10747 UQCRBP2-201ENST00000447827 297 ntBASIC0.66□□□□□ -2.3
CD28P10747 RNU6-329P-201ENST00000459618 107 ntBASIC0.66□□□□□ -2.3
CD28P10747 RNU6-322P-201ENST00000516010 103 ntBASIC0.66□□□□□ -2.3
CD28P10747 RNU6-107P-201ENST00000516643 102 ntBASIC0.66□□□□□ -2.3
CD28P10747 RNU2-56P-201ENST00000516826 190 ntBASIC0.66□□□□□ -2.3
CD28P10747 RNU6-273P-201ENST00000516937 96 ntBASIC0.66□□□□□ -2.3
CD28P10747 AC027419.1-201ENST00000522976 328 ntBASIC0.66□□□□□ -2.3
CD28P10747 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.66□□□□□ -2.3
CD28P10747 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.66□□□□□ -2.3
CD28P10747 MIR4790-201ENST00000577799 79 ntBASIC0.66□□□□□ -2.3
CD28P10747 MIR4661-201ENST00000582720 75 ntBASIC0.66□□□□□ -2.3
CD28P10747 FAM71BP1-201ENST00000604431 523 ntBASIC0.66□□□□□ -2.3
CD28P10747 AC104260.1-201ENST00000616660 539 ntBASIC0.66□□□□□ -2.3
CD28P10747 U6.115-201ENST00000636045 103 ntBASIC0.66□□□□□ -2.3
CD28P10747 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.3
CD28P10747 Y_RNA.48-201ENST00000362710 103 ntBASIC0.65□□□□□ -2.31
CD28P10747 RNU6-454P-201ENST00000364292 107 ntBASIC0.65□□□□□ -2.31
CD28P10747 MIR520G-201ENST00000385064 90 ntBASIC0.65□□□□□ -2.31
CD28P10747 AC016907.1-201ENST00000419483 435 ntBASIC0.65□□□□□ -2.31
CD28P10747 MTCYBP10-201ENST00000424905 650 ntBASIC0.65□□□□□ -2.31
CD28P10747 RNU6-1132P-201ENST00000459214 107 ntBASIC0.65□□□□□ -2.31
CD28P10747 AL049830.1-201ENST00000468034 425 ntBASIC0.65□□□□□ -2.31
CD28P10747 RNU4-49P-201ENST00000516080 140 ntBASIC0.65□□□□□ -2.31
CD28P10747 RNU6-1278P-201ENST00000516130 107 ntBASIC0.65□□□□□ -2.31
CD28P10747 RNA5SP480-201ENST00000516840 109 ntBASIC0.65□□□□□ -2.31
CD28P10747 DEFB108E-201ENST00000524692 240 ntBASIC0.65□□□□□ -2.31
CD28P10747 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.65□□□□□ -2.31
CD28P10747 AC018448.1-201ENST00000552843 316 ntBASIC0.65□□□□□ -2.31
CD28P10747 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.65□□□□□ -2.31
CD28P10747 AC018638.8-201ENST00000588755 281 ntBASIC0.65□□□□□ -2.31
CD28P10747 AL117336.2-201ENST00000602435 335 ntBASIC0.65□□□□□ -2.31
CD28P10747 PRELID3BP2-201ENST00000605362 201 ntBASIC0.65□□□□□ -2.31
CD28P10747 AL442644.1-201ENST00000454390 3105 ntBASIC0.64□□□□□ -2.31
CD28P10747 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CD28P10747 AC005592.1-201ENST00000566527 1640 ntBASIC0.64□□□□□ -2.31
CD28P10747 RNA5SP361-201ENST00000362686 118 ntBASIC0.64□□□□□ -2.31
CD28P10747 SNORD114-2-201ENST00000363953 78 ntBASIC0.64□□□□□ -2.31
CD28P10747 Y_RNA.243-201ENST00000364481 109 ntBASIC0.64□□□□□ -2.31
CD28P10747 RNU4-12P-201ENST00000365233 139 ntBASIC0.64□□□□□ -2.31
CD28P10747 Y_RNA.339-201ENST00000365325 102 ntBASIC0.64□□□□□ -2.31
CD28P10747 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.64□□□□□ -2.31
CD28P10747 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CD28P10747 RNU6-969P-201ENST00000383900 105 ntBASIC0.64□□□□□ -2.31
CD28P10747 SNORA80D-201ENST00000384488 135 ntBASIC0.64□□□□□ -2.31
CD28P10747 Y_RNA.516-201ENST00000384541 124 ntBASIC0.64□□□□□ -2.31
CD28P10747 Y_RNA.540-201ENST00000384638 111 ntBASIC0.64□□□□□ -2.31
CD28P10747 Y_RNA.557-201ENST00000384680 107 ntBASIC0.64□□□□□ -2.31
CD28P10747 SNORD116-4-201ENST00000384733 96 ntBASIC0.64□□□□□ -2.31
CD28P10747 MIR200A-201ENST00000384875 90 ntBASIC0.64□□□□□ -2.31
CD28P10747 Y_RNA.594-201ENST00000410373 140 ntBASIC0.64□□□□□ -2.31
CD28P10747 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.64□□□□□ -2.31
CD28P10747 AC114482.1-201ENST00000418010 247 ntBASIC0.64□□□□□ -2.31
CD28P10747 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.64□□□□□ -2.31
CD28P10747 UBE2V1P7-201ENST00000446395 340 ntBASIC0.64□□□□□ -2.31
CD28P10747 PCNPP5-201ENST00000452246 481 ntBASIC0.64□□□□□ -2.31
CD28P10747 SNORA70.12-201ENST00000516084 153 ntBASIC0.64□□□□□ -2.31
CD28P10747 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.64□□□□□ -2.31
CD28P10747 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.64□□□□□ -2.31
CD28P10747 AC136932.1-201ENST00000574771 208 ntBASIC0.64□□□□□ -2.31
CD28P10747 AC108706.1-201ENST00000611053 297 ntBASIC0.64□□□□□ -2.31
CD28P10747 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.64□□□□□ -2.31
CD28P10747 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CD28P10747 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.64□□□□□ -2.31
CD28P10747 RNY1P16-201ENST00000363063 111 ntBASIC0.63□□□□□ -2.31
CD28P10747 RNU6-833P-201ENST00000363486 107 ntBASIC0.63□□□□□ -2.31
CD28P10747 SNORD114-24-201ENST00000365029 72 ntBASIC0.63□□□□□ -2.31
CD28P10747 RNU6-407P-201ENST00000365280 104 ntBASIC0.63□□□□□ -2.31
CD28P10747 RNU6-318P-201ENST00000384283 103 ntBASIC0.63□□□□□ -2.31
CD28P10747 MIR7-2-201ENST00000384970 110 ntBASIC0.63□□□□□ -2.31
CD28P10747 RNU6-700P-201ENST00000391043 107 ntBASIC0.63□□□□□ -2.31
CD28P10747 RNU6-510P-201ENST00000391239 108 ntBASIC0.63□□□□□ -2.31
CD28P10747 AC074085.1-201ENST00000413598 418 ntBASIC0.63□□□□□ -2.31
CD28P10747 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.63□□□□□ -2.31
CD28P10747 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.63□□□□□ -2.31
CD28P10747 Z98949.2-201ENST00000440996 144 ntBASIC0.63□□□□□ -2.31
CD28P10747 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.63□□□□□ -2.31
CD28P10747 AC093850.1-201ENST00000454121 251 ntBASIC0.63□□□□□ -2.31
CD28P10747 U8.22-201ENST00000459141 133 ntBASIC0.63□□□□□ -2.31
CD28P10747 RNU7-21P-201ENST00000459430 62 ntBASIC0.63□□□□□ -2.31
CD28P10747 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.63□□□□□ -2.31
CD28P10747 MIR4714-201ENST00000580728 77 ntBASIC0.63□□□□□ -2.31
CD28P10747 AC127459.3-201ENST00000624328 466 ntBASIC0.63□□□□□ -2.31
CD28P10747 AC027279.3-201ENST00000625055 122 ntBASIC0.63□□□□□ -2.31
CD28P10747 Y_RNA.124-201ENST00000363339 93 ntBASIC0.62□□□□□ -2.31
CD28P10747 RNU4-41P-201ENST00000364426 143 ntBASIC0.62□□□□□ -2.31
CD28P10747 Y_RNA.267-201ENST00000364679 109 ntBASIC0.62□□□□□ -2.31
CD28P10747 Y_RNA.453-201ENST00000384223 109 ntBASIC0.62□□□□□ -2.31
CD28P10747 RNU6-342P-201ENST00000384521 104 ntBASIC0.62□□□□□ -2.31
CD28P10747 RNU6-376P-201ENST00000384731 106 ntBASIC0.62□□□□□ -2.31
CD28P10747 MIR526A1-201ENST00000384897 85 ntBASIC0.62□□□□□ -2.31
CD28P10747 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.62□□□□□ -2.31
CD28P10747 RNU6-1050P-201ENST00000410388 107 ntBASIC0.62□□□□□ -2.31
CD28P10747 AC004941.2-201ENST00000427009 228 ntBASIC0.62□□□□□ -2.31
CD28P10747 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.62□□□□□ -2.31
CD28P10747 HSPE1P13-201ENST00000451143 297 ntBASIC0.62□□□□□ -2.31
CD28P10747 RPL39P39-201ENST00000455840 151 ntBASIC0.62□□□□□ -2.31
CD28P10747 snoU13.25-201ENST00000458945 104 ntBASIC0.62□□□□□ -2.31
CD28P10747 SNORD124-201ENST00000459577 104 ntBASIC0.62□□□□□ -2.31
CD28P10747 AC116353.2-201ENST00000505332 712 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms