Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AC005592.1-201ENST00000566527 1640 ntBASIC0.88□□□□□ -2.27
CAPN1P07384 Y_RNA.2-201ENST00000362330 96 ntBASIC0.87□□□□□ -2.27
CAPN1P07384 RNY1P16-201ENST00000363063 111 ntBASIC0.87□□□□□ -2.27
CAPN1P07384 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.87□□□□□ -2.27
CAPN1P07384 SNORA80D-201ENST00000384488 135 ntBASIC0.87□□□□□ -2.27
CAPN1P07384 RNU6-376P-201ENST00000384731 106 ntBASIC0.87□□□□□ -2.27
CAPN1P07384 MIR19B1-201ENST00000384829 87 ntBASIC0.87□□□□□ -2.27
CAPN1P07384 MIR200A-201ENST00000384875 90 ntBASIC0.87□□□□□ -2.27
CAPN1P07384 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.87□□□□□ -2.27
CAPN1P07384 RNU6-1050P-201ENST00000410388 107 ntBASIC0.87□□□□□ -2.27
CAPN1P07384 AC074085.1-201ENST00000413598 418 ntBASIC0.87□□□□□ -2.27
CAPN1P07384 RPS3AP52-201ENST00000435639 297 ntBASIC0.87□□□□□ -2.27
CAPN1P07384 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.87□□□□□ -2.27
CAPN1P07384 RN7SKP49-201ENST00000516675 260 ntBASIC0.87□□□□□ -2.27
CAPN1P07384 RNU6-1223P-201ENST00000517124 104 ntBASIC0.87□□□□□ -2.27
CAPN1P07384 AC018448.1-201ENST00000552843 316 ntBASIC0.87□□□□□ -2.27
CAPN1P07384 AL020996.3-201ENST00000606617 222 ntBASIC0.87□□□□□ -2.27
CAPN1P07384 AC104260.1-201ENST00000616660 539 ntBASIC0.87□□□□□ -2.27
CAPN1P07384 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.87□□□□□ -2.27
CAPN1P07384 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CAPN1P07384 Y_RNA.124-201ENST00000363339 93 ntBASIC0.86□□□□□ -2.27
CAPN1P07384 RNU6-879P-201ENST00000364328 108 ntBASIC0.86□□□□□ -2.27
CAPN1P07384 RNU4-40P-201ENST00000364351 143 ntBASIC0.86□□□□□ -2.27
CAPN1P07384 RNU6-318P-201ENST00000384283 103 ntBASIC0.86□□□□□ -2.27
CAPN1P07384 RNU6-700P-201ENST00000391043 107 ntBASIC0.86□□□□□ -2.27
CAPN1P07384 RNA5SP482-201ENST00000391269 118 ntBASIC0.86□□□□□ -2.27
CAPN1P07384 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.86□□□□□ -2.27
CAPN1P07384 AC011352.1-201ENST00000512300 793 ntBASIC0.86□□□□□ -2.27
CAPN1P07384 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.86□□□□□ -2.27
CAPN1P07384 RNU6-1291P-201ENST00000516591 104 ntBASIC0.86□□□□□ -2.27
CAPN1P07384 RNU6-341P-201ENST00000516973 96 ntBASIC0.86□□□□□ -2.27
CAPN1P07384 AP002004.2-201ENST00000531656 154 ntBASIC0.86□□□□□ -2.27
CAPN1P07384 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.86□□□□□ -2.27
CAPN1P07384 AC009229.3-201ENST00000608056 282 ntBASIC0.86□□□□□ -2.27
CAPN1P07384 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.86□□□□□ -2.27
CAPN1P07384 U6.115-201ENST00000636045 103 ntBASIC0.86□□□□□ -2.27
CAPN1P07384 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.86□□□□□ -2.27
CAPN1P07384 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
CAPN1P07384 MIRLET7C-201ENST00000362160 84 ntBASIC0.85□□□□□ -2.27
CAPN1P07384 MIR410-201ENST00000362222 80 ntBASIC0.85□□□□□ -2.27
CAPN1P07384 RNU6-454P-201ENST00000364292 107 ntBASIC0.85□□□□□ -2.27
CAPN1P07384 RNU6-593P-201ENST00000364716 112 ntBASIC0.85□□□□□ -2.27
CAPN1P07384 Y_RNA.363-201ENST00000365529 113 ntBASIC0.85□□□□□ -2.27
CAPN1P07384 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
CAPN1P07384 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.85□□□□□ -2.27
CAPN1P07384 MIR1277-201ENST00000408536 78 ntBASIC0.85□□□□□ -2.27
CAPN1P07384 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.85□□□□□ -2.27
CAPN1P07384 MTCYBP10-201ENST00000424905 650 ntBASIC0.85□□□□□ -2.27
CAPN1P07384 AC002429.1-201ENST00000437672 148 ntBASIC0.85□□□□□ -2.27
CAPN1P07384 AL137792.2-201ENST00000443484 235 ntBASIC0.85□□□□□ -2.27
CAPN1P07384 RPS4XP11-201ENST00000446897 772 ntBASIC0.85□□□□□ -2.27
CAPN1P07384 LINC01399-202ENST00000458450 244 ntBASIC0.85□□□□□ -2.27
CAPN1P07384 RPL7P42-201ENST00000481005 679 ntBASIC0.85□□□□□ -2.27
CAPN1P07384 AC022493.2-201ENST00000506122 481 ntBASIC0.85□□□□□ -2.27
CAPN1P07384 PDCD5P2-201ENST00000507570 312 ntBASIC0.85□□□□□ -2.27
CAPN1P07384 AC074133.1-201ENST00000515696 183 ntBASIC0.85□□□□□ -2.27
CAPN1P07384 RNU6-1278P-201ENST00000516130 107 ntBASIC0.85□□□□□ -2.27
CAPN1P07384 AC022868.1-201ENST00000517767 391 ntBASIC0.85□□□□□ -2.27
CAPN1P07384 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.85□□□□□ -2.27
CAPN1P07384 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.85□□□□□ -2.27
CAPN1P07384 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.85□□□□□ -2.27
CAPN1P07384 AL117336.2-201ENST00000602435 335 ntBASIC0.85□□□□□ -2.27
CAPN1P07384 AC013244.2-201ENST00000603396 103 ntBASIC0.85□□□□□ -2.27
CAPN1P07384 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.85□□□□□ -2.27
CAPN1P07384 RNU1-36P-201ENST00000365130 165 ntBASIC0.84□□□□□ -2.27
CAPN1P07384 Y_RNA.339-201ENST00000365325 102 ntBASIC0.84□□□□□ -2.27
CAPN1P07384 RNU6-117P-201ENST00000365415 107 ntBASIC0.84□□□□□ -2.27
CAPN1P07384 Y_RNA.358-201ENST00000365491 99 ntBASIC0.84□□□□□ -2.27
CAPN1P07384 Y_RNA.404-201ENST00000383978 102 ntBASIC0.84□□□□□ -2.27
CAPN1P07384 Y_RNA.498-201ENST00000384460 102 ntBASIC0.84□□□□□ -2.27
CAPN1P07384 RNU6-510P-201ENST00000391239 108 ntBASIC0.84□□□□□ -2.27
CAPN1P07384 RNU2-64P-201ENST00000411315 191 ntBASIC0.84□□□□□ -2.27
CAPN1P07384 MTND3P8-201ENST00000412909 339 ntBASIC0.84□□□□□ -2.27
CAPN1P07384 PCNPP5-201ENST00000452246 481 ntBASIC0.84□□□□□ -2.27
CAPN1P07384 AC069439.1-201ENST00000494739 167 ntBASIC0.84□□□□□ -2.27
CAPN1P07384 AC090142.3-201ENST00000519012 385 ntBASIC0.84□□□□□ -2.27
CAPN1P07384 CYP3A137P-201ENST00000562436 69 ntBASIC0.84□□□□□ -2.27
CAPN1P07384 MIR4698-201ENST00000577795 80 ntBASIC0.84□□□□□ -2.27
CAPN1P07384 AC005828.6-201ENST00000606610 232 ntBASIC0.84□□□□□ -2.27
CAPN1P07384 RNY1-201ENST00000364228 113 ntBASIC0.83□□□□□ -2.28
CAPN1P07384 RNU6-601P-201ENST00000384540 107 ntBASIC0.83□□□□□ -2.28
CAPN1P07384 Y_RNA.540-201ENST00000384638 111 ntBASIC0.83□□□□□ -2.28
CAPN1P07384 MIR942-201ENST00000401111 86 ntBASIC0.83□□□□□ -2.28
CAPN1P07384 MIR873-201ENST00000401120 77 ntBASIC0.83□□□□□ -2.28
CAPN1P07384 RNU5A-5P-201ENST00000411054 116 ntBASIC0.83□□□□□ -2.28
CAPN1P07384 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.83□□□□□ -2.28
CAPN1P07384 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.83□□□□□ -2.28
CAPN1P07384 MTND3P10-201ENST00000450967 341 ntBASIC0.83□□□□□ -2.28
CAPN1P07384 RNU6-625P-201ENST00000459412 107 ntBASIC0.83□□□□□ -2.28
CAPN1P07384 SNORA40.9-201ENST00000515895 93 ntBASIC0.83□□□□□ -2.28
CAPN1P07384 SNORD79.1-201ENST00000516069 84 ntBASIC0.83□□□□□ -2.28
CAPN1P07384 ACA64.5-201ENST00000516207 127 ntBASIC0.83□□□□□ -2.28
CAPN1P07384 Y_RNA.708-201ENST00000516950 96 ntBASIC0.83□□□□□ -2.28
CAPN1P07384 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.83□□□□□ -2.28
CAPN1P07384 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.83□□□□□ -2.28
CAPN1P07384 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.83□□□□□ -2.28
CAPN1P07384 FAM71BP1-201ENST00000604431 523 ntBASIC0.83□□□□□ -2.28
CAPN1P07384 AC002553.4-201ENST00000616896 331 ntBASIC0.83□□□□□ -2.28
CAPN1P07384 MIR3674-201ENST00000636576 68 ntBASIC0.83□□□□□ -2.28
CAPN1P07384 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms