Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 Y_RNA.124-201ENST00000363339 93 ntBASIC0.81□□□□□ -2.28
CD74P04233 RNU6-99P-201ENST00000364721 107 ntBASIC0.81□□□□□ -2.28
CD74P04233 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.81□□□□□ -2.28
CD74P04233 RNU6-318P-201ENST00000384283 103 ntBASIC0.81□□□□□ -2.28
CD74P04233 RNU6-192P-201ENST00000391253 100 ntBASIC0.81□□□□□ -2.28
CD74P04233 RNU4-14P-201ENST00000410858 122 ntBASIC0.81□□□□□ -2.28
CD74P04233 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.81□□□□□ -2.28
CD74P04233 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.81□□□□□ -2.28
CD74P04233 RPL39P38-201ENST00000467018 153 ntBASIC0.81□□□□□ -2.28
CD74P04233 COX6CP14-201ENST00000469580 174 ntBASIC0.81□□□□□ -2.28
CD74P04233 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.81□□□□□ -2.28
CD74P04233 SNORA40.9-201ENST00000515895 93 ntBASIC0.81□□□□□ -2.28
CD74P04233 RNU6-947P-201ENST00000516264 106 ntBASIC0.81□□□□□ -2.28
CD74P04233 RNU6-165P-201ENST00000517170 99 ntBASIC0.81□□□□□ -2.28
CD74P04233 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.81□□□□□ -2.28
CD74P04233 AL162424.1-201ENST00000602325 221 ntBASIC0.81□□□□□ -2.28
CD74P04233 SNORA28-201ENST00000606769 126 ntBASIC0.81□□□□□ -2.28
CD74P04233 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.81□□□□□ -2.28
CD74P04233 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.81□□□□□ -2.28
CD74P04233 AL669831.3-213ENST00000636676 183 ntBASIC0.81□□□□□ -2.28
CD74P04233 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
CD74P04233 AC005592.1-201ENST00000566527 1640 ntBASIC0.8□□□□□ -2.28
CD74P04233 SNORA27.1-201ENST00000362604 124 ntBASIC0.8□□□□□ -2.28
CD74P04233 Y_RNA.122-201ENST00000363331 96 ntBASIC0.8□□□□□ -2.28
CD74P04233 RNU1-93P-201ENST00000364704 169 ntBASIC0.8□□□□□ -2.28
CD74P04233 SNORD114-22-201ENST00000365423 72 ntBASIC0.8□□□□□ -2.28
CD74P04233 RNU6-1080P-201ENST00000383982 107 ntBASIC0.8□□□□□ -2.28
CD74P04233 U8.16-201ENST00000391279 133 ntBASIC0.8□□□□□ -2.28
CD74P04233 RNU6-876P-201ENST00000391295 104 ntBASIC0.8□□□□□ -2.28
CD74P04233 SNORD12B-201ENST00000410433 91 ntBASIC0.8□□□□□ -2.28
CD74P04233 AC114482.1-201ENST00000418010 247 ntBASIC0.8□□□□□ -2.28
CD74P04233 RAB28P5-201ENST00000427490 651 ntBASIC0.8□□□□□ -2.28
CD74P04233 MIR2053-201ENST00000459295 91 ntBASIC0.8□□□□□ -2.28
CD74P04233 RPL39P28-201ENST00000465655 155 ntBASIC0.8□□□□□ -2.28
CD74P04233 RPL17P19-201ENST00000489069 552 ntBASIC0.8□□□□□ -2.28
CD74P04233 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.8□□□□□ -2.28
CD74P04233 AC074133.1-201ENST00000515696 183 ntBASIC0.8□□□□□ -2.28
CD74P04233 RN7SKP49-201ENST00000516675 260 ntBASIC0.8□□□□□ -2.28
CD74P04233 RNU6-63P-201ENST00000516690 95 ntBASIC0.8□□□□□ -2.28
CD74P04233 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.8□□□□□ -2.28
CD74P04233 MTND4LP26-201ENST00000518144 282 ntBASIC0.8□□□□□ -2.28
CD74P04233 AC005899.2-201ENST00000584353 90 ntBASIC0.8□□□□□ -2.28
CD74P04233 AC080078.3-201ENST00000605407 463 ntBASIC0.8□□□□□ -2.28
CD74P04233 MIR7111-201ENST00000619751 72 ntBASIC0.8□□□□□ -2.28
CD74P04233 U6.115-201ENST00000636045 103 ntBASIC0.8□□□□□ -2.28
CD74P04233 MIR3674-201ENST00000636576 68 ntBASIC0.8□□□□□ -2.28
CD74P04233 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CD74P04233 MIR96-201ENST00000362288 78 ntBASIC0.79□□□□□ -2.28
CD74P04233 SNORA1B-201ENST00000362535 133 ntBASIC0.79□□□□□ -2.28
CD74P04233 RNU6-454P-201ENST00000364292 107 ntBASIC0.79□□□□□ -2.28
CD74P04233 RNU6-926P-201ENST00000384075 107 ntBASIC0.79□□□□□ -2.28
CD74P04233 RNY1P14-201ENST00000384426 108 ntBASIC0.79□□□□□ -2.28
CD74P04233 MIR222-201ENST00000384992 110 ntBASIC0.79□□□□□ -2.28
CD74P04233 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.79□□□□□ -2.28
CD74P04233 snoU13.18-201ENST00000459483 104 ntBASIC0.79□□□□□ -2.28
CD74P04233 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.79□□□□□ -2.28
CD74P04233 RNU6-408P-201ENST00000515910 100 ntBASIC0.79□□□□□ -2.28
CD74P04233 RNU7-12P-201ENST00000516030 62 ntBASIC0.79□□□□□ -2.28
CD74P04233 RNU6-307P-201ENST00000516743 106 ntBASIC0.79□□□□□ -2.28
CD74P04233 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.79□□□□□ -2.28
CD74P04233 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.79□□□□□ -2.28
CD74P04233 AC127459.3-201ENST00000624328 466 ntBASIC0.79□□□□□ -2.28
CD74P04233 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.79□□□□□ -2.28
CD74P04233 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
CD74P04233 RNU6-845P-201ENST00000362578 103 ntBASIC0.78□□□□□ -2.28
CD74P04233 RNU6-1301P-201ENST00000362724 104 ntBASIC0.78□□□□□ -2.28
CD74P04233 RNU6-199P-201ENST00000362954 107 ntBASIC0.78□□□□□ -2.28
CD74P04233 Y_RNA.118-201ENST00000363300 101 ntBASIC0.78□□□□□ -2.28
CD74P04233 RNU1-36P-201ENST00000365130 165 ntBASIC0.78□□□□□ -2.28
CD74P04233 RNU6-424P-201ENST00000384367 105 ntBASIC0.78□□□□□ -2.28
CD74P04233 RNU11-5P-201ENST00000391216 129 ntBASIC0.78□□□□□ -2.28
CD74P04233 RNU6-370P-201ENST00000411008 104 ntBASIC0.78□□□□□ -2.28
CD74P04233 AL137792.2-201ENST00000443484 235 ntBASIC0.78□□□□□ -2.28
CD74P04233 AC087343.1-201ENST00000477341 475 ntBASIC0.78□□□□□ -2.28
CD74P04233 OR9P1P-201ENST00000496431 281 ntBASIC0.78□□□□□ -2.28
CD74P04233 AC116353.2-201ENST00000505332 712 ntBASIC0.78□□□□□ -2.28
CD74P04233 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.78□□□□□ -2.28
CD74P04233 RNU6-1278P-201ENST00000516130 107 ntBASIC0.78□□□□□ -2.28
CD74P04233 RNU6-341P-201ENST00000516973 96 ntBASIC0.78□□□□□ -2.28
CD74P04233 AC023442.1-201ENST00000531247 422 ntBASIC0.78□□□□□ -2.28
CD74P04233 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.78□□□□□ -2.28
CD74P04233 MIR3684-201ENST00000579779 74 ntBASIC0.78□□□□□ -2.28
CD74P04233 SNORA4-201ENST00000584302 138 ntBASIC0.78□□□□□ -2.28
CD74P04233 AC098679.4-201ENST00000624241 654 ntBASIC0.78□□□□□ -2.28
CD74P04233 RNY3P11-201ENST00000364153 102 ntBASIC0.77□□□□□ -2.29
CD74P04233 Y_RNA.248-201ENST00000364501 109 ntBASIC0.77□□□□□ -2.29
CD74P04233 MIR873-201ENST00000401120 77 ntBASIC0.77□□□□□ -2.29
CD74P04233 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.77□□□□□ -2.29
CD74P04233 Y_RNA.619-201ENST00000410951 90 ntBASIC0.77□□□□□ -2.29
CD74P04233 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.77□□□□□ -2.29
CD74P04233 PDCL2P1-201ENST00000419302 352 ntBASIC0.77□□□□□ -2.29
CD74P04233 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.77□□□□□ -2.29
CD74P04233 AC104332.1-201ENST00000440471 797 ntBASIC0.77□□□□□ -2.29
CD74P04233 Y_RNA.635-201ENST00000459041 101 ntBASIC0.77□□□□□ -2.29
CD74P04233 RNU7-169P-201ENST00000459456 61 ntBASIC0.77□□□□□ -2.29
CD74P04233 AC048334.1-201ENST00000477975 159 ntBASIC0.77□□□□□ -2.29
CD74P04233 AC105758.1-201ENST00000506038 399 ntBASIC0.77□□□□□ -2.29
CD74P04233 SNORA31.2-201ENST00000516019 134 ntBASIC0.77□□□□□ -2.29
CD74P04233 RNU6-264P-201ENST00000517134 104 ntBASIC0.77□□□□□ -2.29
CD74P04233 RNU6-1116P-201ENST00000517269 99 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms