Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC005178.1-201ENST00000508392 440 ntBASIC-0.75□□□□□ -2.53
TNFP01375 AC097462.1-201ENST00000514125 324 ntBASIC-0.75□□□□□ -2.53
TNFP01375 RNU7-51P-201ENST00000516560 62 ntBASIC-0.75□□□□□ -2.53
TNFP01375 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.75□□□□□ -2.53
TNFP01375 AC068587.5-201ENST00000528506 175 ntBASIC-0.75□□□□□ -2.53
TNFP01375 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.75□□□□□ -2.53
TNFP01375 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.75□□□□□ -2.53
TNFP01375 AC125232.2-201ENST00000592457 143 ntBASIC-0.75□□□□□ -2.53
TNFP01375 MTATP6P2-201ENST00000603319 678 ntBASIC-0.75□□□□□ -2.53
TNFP01375 AC245297.2-201ENST00000610119 565 ntBASIC-0.75□□□□□ -2.53
TNFP01375 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.75□□□□□ -2.53
TNFP01375 AL139418.1-201ENST00000613613 177 ntBASIC-0.75□□□□□ -2.53
TNFP01375 AC068880.4-201ENST00000623082 495 ntBASIC-0.75□□□□□ -2.53
TNFP01375 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.75□□□□□ -2.53
TNFP01375 AC073343.1-201ENST00000328239 651 ntBASIC-0.76□□□□□ -2.53
TNFP01375 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.76□□□□□ -2.53
TNFP01375 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.76□□□□□ -2.53
TNFP01375 SNORD115-44-201ENST00000365391 82 ntBASIC-0.76□□□□□ -2.53
TNFP01375 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.76□□□□□ -2.53
TNFP01375 MIR9-2-201ENST00000384838 87 ntBASIC-0.76□□□□□ -2.53
TNFP01375 MIR136-201ENST00000385207 82 ntBASIC-0.76□□□□□ -2.53
TNFP01375 SNORD28B-201ENST00000390993 75 ntBASIC-0.76□□□□□ -2.53
TNFP01375 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.76□□□□□ -2.53
TNFP01375 MTND1P26-201ENST00000440488 538 ntBASIC-0.76□□□□□ -2.53
TNFP01375 BTBD7P2-201ENST00000441962 620 ntBASIC-0.76□□□□□ -2.53
TNFP01375 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.76□□□□□ -2.53
TNFP01375 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.76□□□□□ -2.53
TNFP01375 U8.21-201ENST00000459536 136 ntBASIC-0.76□□□□□ -2.53
TNFP01375 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.76□□□□□ -2.53
TNFP01375 RNU6-685P-201ENST00000517088 95 ntBASIC-0.76□□□□□ -2.53
TNFP01375 RNA5SP66-201ENST00000517178 101 ntBASIC-0.76□□□□□ -2.53
TNFP01375 AC068587.4-201ENST00000533893 186 ntBASIC-0.76□□□□□ -2.53
TNFP01375 MIR4263-201ENST00000584745 83 ntBASIC-0.76□□□□□ -2.53
TNFP01375 AC005776.1-201ENST00000603164 290 ntBASIC-0.76□□□□□ -2.53
TNFP01375 MIR8066-201ENST00000617280 78 ntBASIC-0.76□□□□□ -2.53
TNFP01375 RNU4-36P-201ENST00000364294 144 ntBASIC-0.77□□□□□ -2.53
TNFP01375 RNU6-61P-201ENST00000365528 109 ntBASIC-0.77□□□□□ -2.53
TNFP01375 RNU6-24P-201ENST00000384440 107 ntBASIC-0.77□□□□□ -2.53
TNFP01375 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.77□□□□□ -2.53
TNFP01375 RNU2-8P-201ENST00000410727 190 ntBASIC-0.77□□□□□ -2.53
TNFP01375 MTCO2P23-201ENST00000425216 680 ntBASIC-0.77□□□□□ -2.53
TNFP01375 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.77□□□□□ -2.53
TNFP01375 SNORD65B-201ENST00000459126 73 ntBASIC-0.77□□□□□ -2.53
TNFP01375 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.77□□□□□ -2.53
TNFP01375 SNORD38.3-201ENST00000516599 73 ntBASIC-0.77□□□□□ -2.53
TNFP01375 SNORA31.14-201ENST00000516728 116 ntBASIC-0.77□□□□□ -2.53
TNFP01375 RNU6-448P-201ENST00000517052 107 ntBASIC-0.77□□□□□ -2.53
TNFP01375 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.77□□□□□ -2.53
TNFP01375 FGF7P1-201ENST00000582820 288 ntBASIC-0.77□□□□□ -2.53
TNFP01375 AC011458.1-201ENST00000604034 617 ntBASIC-0.77□□□□□ -2.53
TNFP01375 uc_338.19-201ENST00000616808 99 ntBASIC-0.77□□□□□ -2.53
TNFP01375 U4.1-201ENST00000620349 87 ntBASIC-0.77□□□□□ -2.53
TNFP01375 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.78□□□□□ -2.53
TNFP01375 RNU6-827P-201ENST00000365553 106 ntBASIC-0.78□□□□□ -2.53
TNFP01375 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.78□□□□□ -2.53
TNFP01375 MIR587-201ENST00000384845 96 ntBASIC-0.78□□□□□ -2.53
TNFP01375 MIR125B2-201ENST00000385128 89 ntBASIC-0.78□□□□□ -2.53
TNFP01375 MIR153-2-201ENST00000385225 87 ntBASIC-0.78□□□□□ -2.53
TNFP01375 AL590002.1-201ENST00000406554 418 ntBASIC-0.78□□□□□ -2.53
TNFP01375 RNU2-54P-201ENST00000410299 190 ntBASIC-0.78□□□□□ -2.53
TNFP01375 RNU2-39P-201ENST00000410604 198 ntBASIC-0.78□□□□□ -2.53
TNFP01375 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.78□□□□□ -2.53
TNFP01375 ELOCP21-201ENST00000412558 336 ntBASIC-0.78□□□□□ -2.53
TNFP01375 RNU7-134P-201ENST00000458997 64 ntBASIC-0.78□□□□□ -2.53
TNFP01375 AC010486.3-201ENST00000511602 785 ntBASIC-0.78□□□□□ -2.53
TNFP01375 RNU6-344P-201ENST00000516635 111 ntBASIC-0.78□□□□□ -2.53
TNFP01375 RNA5SP33-201ENST00000516687 98 ntBASIC-0.78□□□□□ -2.53
TNFP01375 AC026421.1-201ENST00000519101 163 ntBASIC-0.78□□□□□ -2.53
TNFP01375 RNU6-323P-201ENST00000521915 107 ntBASIC-0.78□□□□□ -2.53
TNFP01375 MIR3118-1-201ENST00000581787 76 ntBASIC-0.78□□□□□ -2.53
TNFP01375 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.79□□□□□ -2.54
TNFP01375 RNU4-16P-201ENST00000364737 141 ntBASIC-0.79□□□□□ -2.54
TNFP01375 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.79□□□□□ -2.54
TNFP01375 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.79□□□□□ -2.54
TNFP01375 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-0.79□□□□□ -2.54
TNFP01375 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.79□□□□□ -2.54
TNFP01375 SPINT5P-201ENST00000448174 155 ntBASIC-0.79□□□□□ -2.54
TNFP01375 MTND1P12-201ENST00000455231 147 ntBASIC-0.79□□□□□ -2.54
TNFP01375 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.79□□□□□ -2.54
TNFP01375 AC010493.1-201ENST00000513479 292 ntBASIC-0.79□□□□□ -2.54
TNFP01375 AC046134.1-201ENST00000514454 666 ntBASIC-0.79□□□□□ -2.54
TNFP01375 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.79□□□□□ -2.54
TNFP01375 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.79□□□□□ -2.54
TNFP01375 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-0.79□□□□□ -2.54
TNFP01375 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.79□□□□□ -2.54
TNFP01375 MIR6740-201ENST00000618268 113 ntBASIC-0.79□□□□□ -2.54
TNFP01375 AC091304.10-201ENST00000641554 121 ntBASIC-0.79□□□□□ -2.54
TNFP01375 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.8□□□□□ -2.54
TNFP01375 SNORD56.2-201ENST00000363242 71 ntBASIC-0.8□□□□□ -2.54
TNFP01375 RNU6-226P-201ENST00000363778 107 ntBASIC-0.8□□□□□ -2.54
TNFP01375 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.8□□□□□ -2.54
TNFP01375 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.8□□□□□ -2.54
TNFP01375 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.8□□□□□ -2.54
TNFP01375 MIR562-201ENST00000384894 95 ntBASIC-0.8□□□□□ -2.54
TNFP01375 MIR570-201ENST00000384917 97 ntBASIC-0.8□□□□□ -2.54
TNFP01375 SNORD64-201ENST00000386683 67 ntBASIC-0.8□□□□□ -2.54
TNFP01375 MTCO3P19-201ENST00000415864 321 ntBASIC-0.8□□□□□ -2.54
TNFP01375 POLR2KP2-201ENST00000438155 177 ntBASIC-0.8□□□□□ -2.54
TNFP01375 MTND2P30-201ENST00000456663 382 ntBASIC-0.8□□□□□ -2.54
TNFP01375 AC010655.3-201ENST00000478818 450 ntBASIC-0.8□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms