Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 SNORD113-5-201ENST00000607261 78 ntBASIC1.69□□□□□ -2.14
CLDN1O95832 snoU2_19.2-201ENST00000363024 80 ntBASIC1.68□□□□□ -2.14
CLDN1O95832 SNORD81.1-201ENST00000363064 77 ntBASIC1.68□□□□□ -2.14
CLDN1O95832 RNU6-1240P-201ENST00000365155 104 ntBASIC1.68□□□□□ -2.14
CLDN1O95832 AL355796.1-201ENST00000406706 323 ntBASIC1.68□□□□□ -2.14
CLDN1O95832 RNU2-20P-201ENST00000410425 191 ntBASIC1.68□□□□□ -2.14
CLDN1O95832 RPL21P38-201ENST00000418090 167 ntBASIC1.68□□□□□ -2.14
CLDN1O95832 BX510359.4-201ENST00000423750 193 ntBASIC1.68□□□□□ -2.14
CLDN1O95832 MTND2P29-201ENST00000438595 412 ntBASIC1.68□□□□□ -2.14
CLDN1O95832 SNORD65B-201ENST00000459126 73 ntBASIC1.68□□□□□ -2.14
CLDN1O95832 AC011406.1-201ENST00000512440 370 ntBASIC1.68□□□□□ -2.14
CLDN1O95832 RNU6-635P-201ENST00000516651 102 ntBASIC1.68□□□□□ -2.14
CLDN1O95832 AP003733.2-201ENST00000529409 171 ntBASIC1.68□□□□□ -2.14
CLDN1O95832 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.68□□□□□ -2.14
CLDN1O95832 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.68□□□□□ -2.14
CLDN1O95832 MIR5089-201ENST00000580047 84 ntBASIC1.68□□□□□ -2.14
CLDN1O95832 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.68□□□□□ -2.14
CLDN1O95832 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.68□□□□□ -2.14
CLDN1O95832 snoU2-30.2-201ENST00000362805 70 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 Y_RNA.64-201ENST00000362845 102 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 RNU6-23P-201ENST00000363283 107 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 SNORD113-8-201ENST00000363497 74 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 Y_RNA.149-201ENST00000363558 117 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 Y_RNA.176-201ENST00000363815 109 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 SNORA72.2-201ENST00000365028 127 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 RNU6-102P-201ENST00000384485 104 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 MIR568-201ENST00000385036 95 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 HMGN2P34-201ENST00000437647 269 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 DYNLT3P2-201ENST00000442517 295 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 ATP5J2P3-201ENST00000451550 258 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.67□□□□□ -2.14
CLDN1O95832 RNU7-95P-201ENST00000459222 64 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 HMGB3P17-201ENST00000504195 649 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 AC010598.1-201ENST00000510378 103 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 AC005786.1-201ENST00000588553 154 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 AC011373.1-201ENST00000607270 237 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 MIR6504-201ENST00000613520 61 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 MIR8062-201ENST00000621515 85 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 AC006001.4-201ENST00000622243 395 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 MIR338-201ENST00000636369 67 ntBASIC1.67□□□□□ -2.14
CLDN1O95832 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CLDN1O95832 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CLDN1O95832 SNORA27.1-201ENST00000362604 124 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 Y_RNA.47-201ENST00000362697 108 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 Y_RNA.286-201ENST00000364813 102 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 Y_RNA.287-201ENST00000364853 94 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 Y_RNA.331-201ENST00000365267 102 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.66□□□□□ -2.14
CLDN1O95832 SNORA20B-201ENST00000384220 132 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 RNU6-472P-201ENST00000384299 107 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 MIR9-3-201ENST00000385084 90 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 SNORA67.5-201ENST00000391036 107 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 AL031003.1-201ENST00000404229 172 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 RNU2-61P-201ENST00000411069 191 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 RNA5SP450-201ENST00000411206 102 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.66□□□□□ -2.14
CLDN1O95832 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
CLDN1O95832 HMGN1P10-201ENST00000474557 553 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.66□□□□□ -2.14
CLDN1O95832 SEPT14P8-201ENST00000508026 178 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 RNY3P15-201ENST00000516297 97 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 RNU6-155P-201ENST00000516347 100 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 RNA5SP480-201ENST00000516840 109 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 RNU6-250P-201ENST00000516958 103 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 AL161670.1-201ENST00000554348 137 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 AC008269.2-201ENST00000561915 1105 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 MIR3935-201ENST00000583472 104 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 AL096840.1-201ENST00000603287 93 ntBASIC1.66□□□□□ -2.14
CLDN1O95832 RNA5SP276-201ENST00000362580 94 ntBASIC1.65□□□□□ -2.15
CLDN1O95832 RNU4-90P-201ENST00000362773 141 ntBASIC1.65□□□□□ -2.15
CLDN1O95832 RNU6-1266P-201ENST00000362794 105 ntBASIC1.65□□□□□ -2.15
CLDN1O95832 Y_RNA.84-201ENST00000363011 104 ntBASIC1.65□□□□□ -2.15
CLDN1O95832 SNORD115-3-201ENST00000363100 82 ntBASIC1.65□□□□□ -2.15
CLDN1O95832 Y_RNA.136-201ENST00000363444 102 ntBASIC1.65□□□□□ -2.15
CLDN1O95832 RNU6-290P-201ENST00000365212 101 ntBASIC1.65□□□□□ -2.15
CLDN1O95832 MIR215-201ENST00000384858 110 ntBASIC1.65□□□□□ -2.15
CLDN1O95832 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CLDN1O95832 MIR873-201ENST00000401120 77 ntBASIC1.65□□□□□ -2.15
CLDN1O95832 AL512604.1-201ENST00000404812 257 ntBASIC1.65□□□□□ -2.15
CLDN1O95832 RNU4-30P-201ENST00000410245 143 ntBASIC1.65□□□□□ -2.15
CLDN1O95832 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CLDN1O95832 AC099677.2-201ENST00000436385 175 ntBASIC1.65□□□□□ -2.15
CLDN1O95832 AC098869.1-201ENST00000481627 292 ntBASIC1.65□□□□□ -2.15
CLDN1O95832 RNU6-436P-201ENST00000516171 114 ntBASIC1.65□□□□□ -2.15
CLDN1O95832 RNU6-1146P-201ENST00000516282 102 ntBASIC1.65□□□□□ -2.15
CLDN1O95832 RNU7-110P-201ENST00000516891 62 ntBASIC1.65□□□□□ -2.15
CLDN1O95832 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.65□□□□□ -2.15
CLDN1O95832 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.65□□□□□ -2.15
CLDN1O95832 AC006380.1-201ENST00000603598 186 ntBASIC1.65□□□□□ -2.15
CLDN1O95832 AL627230.6-201ENST00000611129 280 ntBASIC1.65□□□□□ -2.15
CLDN1O95832 RNU6-271P-201ENST00000363858 105 ntBASIC1.64□□□□□ -2.15
CLDN1O95832 Y_RNA.327-201ENST00000365201 102 ntBASIC1.64□□□□□ -2.15
CLDN1O95832 Y_RNA.512-201ENST00000384518 102 ntBASIC1.64□□□□□ -2.15
CLDN1O95832 Y_RNA.541-201ENST00000384640 113 ntBASIC1.64□□□□□ -2.15
CLDN1O95832 RNU6-21P-201ENST00000384710 107 ntBASIC1.64□□□□□ -2.15
CLDN1O95832 RNU6-713P-201ENST00000384761 107 ntBASIC1.64□□□□□ -2.15
CLDN1O95832 MIR515-2-201ENST00000384883 83 ntBASIC1.64□□□□□ -2.15
CLDN1O95832 MIR515-1-201ENST00000384884 83 ntBASIC1.64□□□□□ -2.15
CLDN1O95832 MIR597-201ENST00000384968 97 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms