Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 RNU6-408P-201ENST00000515910 100 ntBASIC1.44□□□□□ -2.18
GGPS1O95749 RNU6-341P-201ENST00000516973 96 ntBASIC1.44□□□□□ -2.18
GGPS1O95749 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.44□□□□□ -2.18
GGPS1O95749 RAB11AP2-201ENST00000545905 639 ntBASIC1.44□□□□□ -2.18
GGPS1O95749 AC005730.3-201ENST00000583067 366 ntBASIC1.44□□□□□ -2.18
GGPS1O95749 Y_RNA.124-201ENST00000363339 93 ntBASIC1.43□□□□□ -2.18
GGPS1O95749 Y_RNA.259-201ENST00000364619 101 ntBASIC1.43□□□□□ -2.18
GGPS1O95749 RNU6-117P-201ENST00000365415 107 ntBASIC1.43□□□□□ -2.18
GGPS1O95749 Y_RNA.361-201ENST00000365515 120 ntBASIC1.43□□□□□ -2.18
GGPS1O95749 MRPS18CP6-201ENST00000423587 223 ntBASIC1.43□□□□□ -2.18
GGPS1O95749 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.43□□□□□ -2.18
GGPS1O95749 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.43□□□□□ -2.18
GGPS1O95749 RPL39P38-201ENST00000467018 153 ntBASIC1.43□□□□□ -2.18
GGPS1O95749 AL132765.2-201ENST00000610812 351 ntBASIC1.43□□□□□ -2.18
GGPS1O95749 SNORD3E-202ENST00000627253 216 ntBASIC1.43□□□□□ -2.18
GGPS1O95749 RNU6-490P-201ENST00000362985 107 ntBASIC1.42□□□□□ -2.18
GGPS1O95749 SNORA72.1-201ENST00000363485 129 ntBASIC1.42□□□□□ -2.18
GGPS1O95749 RNU6-961P-201ENST00000363893 105 ntBASIC1.42□□□□□ -2.18
GGPS1O95749 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.42□□□□□ -2.18
GGPS1O95749 SNORD116-29-201ENST00000384516 83 ntBASIC1.42□□□□□ -2.18
GGPS1O95749 MIR559-201ENST00000385188 96 ntBASIC1.42□□□□□ -2.18
GGPS1O95749 RNY4P36-201ENST00000391116 96 ntBASIC1.42□□□□□ -2.18
GGPS1O95749 FCF1P4-201ENST00000448326 183 ntBASIC1.42□□□□□ -2.18
GGPS1O95749 RPS29P29-201ENST00000456396 171 ntBASIC1.42□□□□□ -2.18
GGPS1O95749 RNU2-56P-201ENST00000516826 190 ntBASIC1.42□□□□□ -2.18
GGPS1O95749 RNU2-12P-201ENST00000517216 168 ntBASIC1.42□□□□□ -2.18
GGPS1O95749 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.42□□□□□ -2.18
GGPS1O95749 CYP3A52P-201ENST00000563326 91 ntBASIC1.42□□□□□ -2.18
GGPS1O95749 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.42□□□□□ -2.18
GGPS1O95749 AC127459.3-201ENST00000624328 466 ntBASIC1.42□□□□□ -2.18
GGPS1O95749 MTND4LP32-201ENST00000636111 270 ntBASIC1.42□□□□□ -2.18
GGPS1O95749 MIR1302-1-201ENST00000637932 143 ntBASIC1.42□□□□□ -2.18
GGPS1O95749 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
GGPS1O95749 Y_RNA.384-201ENST00000383909 102 ntBASIC1.41□□□□□ -2.18
GGPS1O95749 SDAD1P3-201ENST00000427380 333 ntBASIC1.41□□□□□ -2.18
GGPS1O95749 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.41□□□□□ -2.18
GGPS1O95749 AC099799.1-201ENST00000439809 192 ntBASIC1.41□□□□□ -2.18
GGPS1O95749 RNU7-28P-201ENST00000516759 62 ntBASIC1.41□□□□□ -2.18
GGPS1O95749 RNA5SP102-201ENST00000516865 106 ntBASIC1.41□□□□□ -2.18
GGPS1O95749 AP002004.2-201ENST00000531656 154 ntBASIC1.41□□□□□ -2.18
GGPS1O95749 AC068338.1-201ENST00000565567 176 ntBASIC1.41□□□□□ -2.18
GGPS1O95749 MIR3664-201ENST00000579074 99 ntBASIC1.41□□□□□ -2.18
GGPS1O95749 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
GGPS1O95749 SNORD115-30-201ENST00000364117 82 ntBASIC1.4□□□□□ -2.19
GGPS1O95749 RNY3P11-201ENST00000364153 102 ntBASIC1.4□□□□□ -2.19
GGPS1O95749 Y_RNA.265-201ENST00000364677 108 ntBASIC1.4□□□□□ -2.19
GGPS1O95749 Y_RNA.267-201ENST00000364679 109 ntBASIC1.4□□□□□ -2.19
GGPS1O95749 RNU6-926P-201ENST00000384075 107 ntBASIC1.4□□□□□ -2.19
GGPS1O95749 RNU6-505P-201ENST00000384427 107 ntBASIC1.4□□□□□ -2.19
GGPS1O95749 MIR520G-201ENST00000385064 90 ntBASIC1.4□□□□□ -2.19
GGPS1O95749 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
GGPS1O95749 SNORD78.2-201ENST00000391076 69 ntBASIC1.4□□□□□ -2.19
GGPS1O95749 Y_RNA.605-201ENST00000410577 105 ntBASIC1.4□□□□□ -2.19
GGPS1O95749 RNU5A-5P-201ENST00000411054 116 ntBASIC1.4□□□□□ -2.19
GGPS1O95749 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.4□□□□□ -2.19
GGPS1O95749 AC015922.2-201ENST00000435593 184 ntBASIC1.4□□□□□ -2.19
GGPS1O95749 RNU7-169P-201ENST00000459456 61 ntBASIC1.4□□□□□ -2.19
GGPS1O95749 OR9P1P-201ENST00000496431 281 ntBASIC1.4□□□□□ -2.19
GGPS1O95749 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.4□□□□□ -2.19
GGPS1O95749 RNU6-911P-201ENST00000516523 104 ntBASIC1.4□□□□□ -2.19
GGPS1O95749 Y_RNA.718-201ENST00000517110 102 ntBASIC1.4□□□□□ -2.19
GGPS1O95749 AC023442.1-201ENST00000531247 422 ntBASIC1.4□□□□□ -2.19
GGPS1O95749 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.4□□□□□ -2.19
GGPS1O95749 AC004467.1-201ENST00000615678 330 ntBASIC1.4□□□□□ -2.19
GGPS1O95749 U2.1-201ENST00000618978 145 ntBASIC1.4□□□□□ -2.19
GGPS1O95749 MIR26B-201ENST00000362251 77 ntBASIC1.39□□□□□ -2.19
GGPS1O95749 SNORA1B-201ENST00000362535 133 ntBASIC1.39□□□□□ -2.19
GGPS1O95749 RNU4-76P-201ENST00000364509 141 ntBASIC1.39□□□□□ -2.19
GGPS1O95749 Y_RNA.314-201ENST00000365114 102 ntBASIC1.39□□□□□ -2.19
GGPS1O95749 RNU6-1040P-201ENST00000383974 107 ntBASIC1.39□□□□□ -2.19
GGPS1O95749 RNU6-424P-201ENST00000384367 105 ntBASIC1.39□□□□□ -2.19
GGPS1O95749 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.39□□□□□ -2.19
GGPS1O95749 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.39□□□□□ -2.19
GGPS1O95749 AC092991.1-201ENST00000477176 376 ntBASIC1.39□□□□□ -2.19
GGPS1O95749 RNU6-1012P-201ENST00000516606 109 ntBASIC1.39□□□□□ -2.19
GGPS1O95749 AC055872.1-201ENST00000570978 278 ntBASIC1.39□□□□□ -2.19
GGPS1O95749 AC138305.3-201ENST00000624988 240 ntBASIC1.39□□□□□ -2.19
GGPS1O95749 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
GGPS1O95749 Y_RNA.70-201ENST00000362886 110 ntBASIC1.38□□□□□ -2.19
GGPS1O95749 Y_RNA.303-201ENST00000364998 94 ntBASIC1.38□□□□□ -2.19
GGPS1O95749 MIR628-201ENST00000385229 95 ntBASIC1.38□□□□□ -2.19
GGPS1O95749 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.38□□□□□ -2.19
GGPS1O95749 CALM2P4-201ENST00000430810 426 ntBASIC1.38□□□□□ -2.19
GGPS1O95749 AC091951.2-201ENST00000500762 203 ntBASIC1.38□□□□□ -2.19
GGPS1O95749 FGF7P4-201ENST00000509595 295 ntBASIC1.38□□□□□ -2.19
GGPS1O95749 RNU6-1291P-201ENST00000516591 104 ntBASIC1.38□□□□□ -2.19
GGPS1O95749 RNA5SP168-201ENST00000516642 112 ntBASIC1.38□□□□□ -2.19
GGPS1O95749 RN7SKP88-201ENST00000516847 250 ntBASIC1.38□□□□□ -2.19
GGPS1O95749 AL358944.1-201ENST00000528537 144 ntBASIC1.38□□□□□ -2.19
GGPS1O95749 AL160236.1-201ENST00000556317 195 ntBASIC1.38□□□□□ -2.19
GGPS1O95749 MIR4778-201ENST00000577635 80 ntBASIC1.38□□□□□ -2.19
GGPS1O95749 RBM11P1-201ENST00000604951 799 ntBASIC1.38□□□□□ -2.19
GGPS1O95749 7SK.8-201ENST00000612110 250 ntBASIC1.38□□□□□ -2.19
GGPS1O95749 MIR6504-201ENST00000613520 61 ntBASIC1.38□□□□□ -2.19
GGPS1O95749 7SK.11-201ENST00000615477 250 ntBASIC1.38□□□□□ -2.19
GGPS1O95749 7SK.13-201ENST00000622040 250 ntBASIC1.38□□□□□ -2.19
GGPS1O95749 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
GGPS1O95749 RNA5SP482-201ENST00000391269 118 ntBASIC1.37□□□□□ -2.19
GGPS1O95749 RNU7-152P-201ENST00000458982 64 ntBASIC1.37□□□□□ -2.19
GGPS1O95749 SNORA70.12-201ENST00000516084 153 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms