Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
ZIC3O60481 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
ZIC3O60481 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
ZIC3O60481 AL356292.1-201ENST00000283110 373 ntBASIC1.87□□□□□ -2.11
ZIC3O60481 Y_RNA.14-201ENST00000362415 103 ntBASIC1.87□□□□□ -2.11
ZIC3O60481 SNORA48.1-201ENST00000390879 135 ntBASIC1.87□□□□□ -2.11
ZIC3O60481 AL355497.1-201ENST00000406262 551 ntBASIC1.87□□□□□ -2.11
ZIC3O60481 RNA5SP501-201ENST00000410990 112 ntBASIC1.87□□□□□ -2.11
ZIC3O60481 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.87□□□□□ -2.11
ZIC3O60481 AC024067.1-201ENST00000426199 223 ntBASIC1.87□□□□□ -2.11
ZIC3O60481 AC091959.1-201ENST00000495857 238 ntBASIC1.87□□□□□ -2.11
ZIC3O60481 RNU7-99P-201ENST00000516271 62 ntBASIC1.87□□□□□ -2.11
ZIC3O60481 RNVU1-2-201ENST00000516326 135 ntBASIC1.87□□□□□ -2.11
ZIC3O60481 RNU6-1337P-201ENST00000516525 95 ntBASIC1.87□□□□□ -2.11
ZIC3O60481 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.87□□□□□ -2.11
ZIC3O60481 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.87□□□□□ -2.11
ZIC3O60481 AC007229.1-201ENST00000590455 412 ntBASIC1.87□□□□□ -2.11
ZIC3O60481 AC037487.3-201ENST00000606668 112 ntBASIC1.87□□□□□ -2.11
ZIC3O60481 AL359075.3-201ENST00000613288 217 ntBASIC1.87□□□□□ -2.11
ZIC3O60481 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.87□□□□□ -2.11
ZIC3O60481 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
ZIC3O60481 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.87□□□□□ -2.11
ZIC3O60481 AC092881.1-201ENST00000638218 2733 ntBASIC1.86□□□□□ -2.11
ZIC3O60481 SNORA25.1-201ENST00000362326 128 ntBASIC1.86□□□□□ -2.11
ZIC3O60481 Y_RNA.310-201ENST00000365063 113 ntBASIC1.86□□□□□ -2.11
ZIC3O60481 Y_RNA.368-201ENST00000365547 113 ntBASIC1.86□□□□□ -2.11
ZIC3O60481 MIR515-2-201ENST00000384883 83 ntBASIC1.86□□□□□ -2.11
ZIC3O60481 MIR515-1-201ENST00000384884 83 ntBASIC1.86□□□□□ -2.11
ZIC3O60481 RNU6-1248P-201ENST00000391096 64 ntBASIC1.86□□□□□ -2.11
ZIC3O60481 AL139156.1-201ENST00000412785 841 ntBASIC1.86□□□□□ -2.11
ZIC3O60481 EBAG9P1-201ENST00000418955 543 ntBASIC1.86□□□□□ -2.11
ZIC3O60481 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ZIC3O60481 MTND1P19-201ENST00000511780 315 ntBASIC1.86□□□□□ -2.11
ZIC3O60481 SNORA27.4-201ENST00000516650 95 ntBASIC1.86□□□□□ -2.11
ZIC3O60481 RNU7-172P-201ENST00000517125 64 ntBASIC1.86□□□□□ -2.11
ZIC3O60481 SNORA16B-201ENST00000364674 135 ntBASIC1.85□□□□□ -2.11
ZIC3O60481 RNU6-855P-201ENST00000410395 104 ntBASIC1.85□□□□□ -2.11
ZIC3O60481 RNU6-1186P-201ENST00000410429 97 ntBASIC1.85□□□□□ -2.11
ZIC3O60481 snoU13.15-201ENST00000459407 104 ntBASIC1.85□□□□□ -2.11
ZIC3O60481 RPS26P45-201ENST00000471748 340 ntBASIC1.85□□□□□ -2.11
ZIC3O60481 AC010409.1-201ENST00000487382 476 ntBASIC1.85□□□□□ -2.11
ZIC3O60481 RNU6-63P-201ENST00000516690 95 ntBASIC1.85□□□□□ -2.11
ZIC3O60481 AC024995.1-201ENST00000523014 93 ntBASIC1.85□□□□□ -2.11
ZIC3O60481 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.85□□□□□ -2.11
ZIC3O60481 AL512605.2-201ENST00000592972 256 ntBASIC1.85□□□□□ -2.11
ZIC3O60481 AP000942.4-201ENST00000604811 241 ntBASIC1.85□□□□□ -2.11
ZIC3O60481 Y_RNA.783-201ENST00000613546 102 ntBASIC1.85□□□□□ -2.11
ZIC3O60481 U2.14-201ENST00000615943 113 ntBASIC1.85□□□□□ -2.11
ZIC3O60481 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.11
ZIC3O60481 UBE2WP1-201ENST00000362030 340 ntBASIC1.84□□□□□ -2.11
ZIC3O60481 SNORD114-1-201ENST00000362705 72 ntBASIC1.84□□□□□ -2.11
ZIC3O60481 RNU6-801P-201ENST00000364087 105 ntBASIC1.84□□□□□ -2.11
ZIC3O60481 Y_RNA.307-201ENST00000365022 117 ntBASIC1.84□□□□□ -2.11
ZIC3O60481 Y_RNA.350-201ENST00000365409 98 ntBASIC1.84□□□□□ -2.11
ZIC3O60481 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.84□□□□□ -2.11
ZIC3O60481 Y_RNA.401-201ENST00000383965 117 ntBASIC1.84□□□□□ -2.11
ZIC3O60481 RNU6-514P-201ENST00000384208 107 ntBASIC1.84□□□□□ -2.11
ZIC3O60481 Y_RNA.456-201ENST00000384232 111 ntBASIC1.84□□□□□ -2.11
ZIC3O60481 SNORD116-13-201ENST00000384408 92 ntBASIC1.84□□□□□ -2.11
ZIC3O60481 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.84□□□□□ -2.11
ZIC3O60481 AC010154.1-201ENST00000425857 269 ntBASIC1.84□□□□□ -2.11
ZIC3O60481 AC245047.4-201ENST00000433189 144 ntBASIC1.84□□□□□ -2.11
ZIC3O60481 RPS20P10-201ENST00000451209 253 ntBASIC1.84□□□□□ -2.11
ZIC3O60481 RPL39P38-201ENST00000467018 153 ntBASIC1.84□□□□□ -2.11
ZIC3O60481 AL163195.1-201ENST00000496941 348 ntBASIC1.84□□□□□ -2.11
ZIC3O60481 Y_RNA.680-201ENST00000516441 93 ntBASIC1.84□□□□□ -2.11
ZIC3O60481 RNU1-142P-201ENST00000516682 145 ntBASIC1.84□□□□□ -2.11
ZIC3O60481 AC136628.3-201ENST00000521868 290 ntBASIC1.84□□□□□ -2.11
ZIC3O60481 SUB1P4-201ENST00000566062 339 ntBASIC1.84□□□□□ -2.11
ZIC3O60481 MIR5094-201ENST00000578766 85 ntBASIC1.84□□□□□ -2.11
ZIC3O60481 AC004832.4-201ENST00000608952 331 ntBASIC1.84□□□□□ -2.11
ZIC3O60481 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.84□□□□□ -2.11
ZIC3O60481 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
ZIC3O60481 Y_RNA.44-201ENST00000362676 108 ntBASIC1.83□□□□□ -2.12
ZIC3O60481 Y_RNA.217-201ENST00000364214 105 ntBASIC1.83□□□□□ -2.12
ZIC3O60481 Y_RNA.275-201ENST00000364726 110 ntBASIC1.83□□□□□ -2.12
ZIC3O60481 Y_RNA.341-201ENST00000365341 102 ntBASIC1.83□□□□□ -2.12
ZIC3O60481 Y_RNA.352-201ENST00000365439 102 ntBASIC1.83□□□□□ -2.12
ZIC3O60481 Y_RNA.447-201ENST00000384184 113 ntBASIC1.83□□□□□ -2.12
ZIC3O60481 AL603910.2-201ENST00000407268 136 ntBASIC1.83□□□□□ -2.12
ZIC3O60481 RNA5SP511-201ENST00000410487 115 ntBASIC1.83□□□□□ -2.12
ZIC3O60481 Y_RNA.641-201ENST00000459414 105 ntBASIC1.83□□□□□ -2.12
ZIC3O60481 UBL5P3-201ENST00000475112 231 ntBASIC1.83□□□□□ -2.12
ZIC3O60481 RPL36AP21-201ENST00000490372 323 ntBASIC1.83□□□□□ -2.12
ZIC3O60481 RNU6-1278P-201ENST00000516130 107 ntBASIC1.83□□□□□ -2.12
ZIC3O60481 AC084364.2-201ENST00000546924 395 ntBASIC1.83□□□□□ -2.12
ZIC3O60481 AC015720.1-201ENST00000565251 277 ntBASIC1.83□□□□□ -2.12
ZIC3O60481 AC078899.2-201ENST00000595282 212 ntBASIC1.83□□□□□ -2.12
ZIC3O60481 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.83□□□□□ -2.12
ZIC3O60481 AC073413.2-201ENST00000604332 360 ntBASIC1.83□□□□□ -2.12
ZIC3O60481 AC010900.2-201ENST00000604508 210 ntBASIC1.83□□□□□ -2.12
ZIC3O60481 AC069114.2-201ENST00000604699 304 ntBASIC1.83□□□□□ -2.12
ZIC3O60481 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.83□□□□□ -2.12
ZIC3O60481 U1.36-201ENST00000620684 176 ntBASIC1.83□□□□□ -2.12
ZIC3O60481 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.83□□□□□ -2.12
ZIC3O60481 AC245060.5-201ENST00000610778 3293 ntBASIC1.83□□□□□ -2.12
ZIC3O60481 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
ZIC3O60481 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
ZIC3O60481 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
ZIC3O60481 AP006437.1-201ENST00000641440 3685 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms