Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 RNU6-1323P-201ENST00000384025 107 ntBASIC2.55□□□□□ -2
KDM1AO60341 RNU6-376P-201ENST00000384731 106 ntBASIC2.55□□□□□ -2
KDM1AO60341 MIR515-2-201ENST00000384883 83 ntBASIC2.55□□□□□ -2
KDM1AO60341 MIR515-1-201ENST00000384884 83 ntBASIC2.55□□□□□ -2
KDM1AO60341 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
KDM1AO60341 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.55□□□□□ -2
KDM1AO60341 EBAG9P1-201ENST00000418955 543 ntBASIC2.55□□□□□ -2
KDM1AO60341 RPS29P21-201ENST00000496272 170 ntBASIC2.55□□□□□ -2
KDM1AO60341 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.55□□□□□ -2
KDM1AO60341 RNU7-116P-201ENST00000516940 62 ntBASIC2.55□□□□□ -2
KDM1AO60341 AC015720.1-201ENST00000565251 277 ntBASIC2.55□□□□□ -2
KDM1AO60341 AP003357.1-201ENST00000604497 148 ntBASIC2.55□□□□□ -2
KDM1AO60341 AC098479.1-201ENST00000609225 154 ntBASIC2.55□□□□□ -2
KDM1AO60341 AL359075.3-201ENST00000613288 217 ntBASIC2.55□□□□□ -2
KDM1AO60341 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.54□□□□□ -2
KDM1AO60341 RNU6-1205P-201ENST00000363625 106 ntBASIC2.54□□□□□ -2
KDM1AO60341 RNU4-13P-201ENST00000364019 141 ntBASIC2.54□□□□□ -2
KDM1AO60341 Y_RNA.293-201ENST00000364908 93 ntBASIC2.54□□□□□ -2
KDM1AO60341 U8.7-201ENST00000364940 136 ntBASIC2.54□□□□□ -2
KDM1AO60341 Y_RNA.308-201ENST00000365043 101 ntBASIC2.54□□□□□ -2
KDM1AO60341 RNU6-1186P-201ENST00000410429 97 ntBASIC2.54□□□□□ -2
KDM1AO60341 RNA5SP511-201ENST00000410487 115 ntBASIC2.54□□□□□ -2
KDM1AO60341 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.54□□□□□ -2
KDM1AO60341 BX510359.4-201ENST00000423750 193 ntBASIC2.54□□□□□ -2
KDM1AO60341 PIGPP3-201ENST00000425307 415 ntBASIC2.54□□□□□ -2
KDM1AO60341 CST2P1-201ENST00000425770 87 ntBASIC2.54□□□□□ -2
KDM1AO60341 AC117454.1-201ENST00000491120 168 ntBASIC2.54□□□□□ -2
KDM1AO60341 RN7SKP132-201ENST00000516001 208 ntBASIC2.54□□□□□ -2
KDM1AO60341 RNU7-128P-201ENST00000517247 62 ntBASIC2.54□□□□□ -2
KDM1AO60341 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.54□□□□□ -2
KDM1AO60341 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KDM1AO60341 AC127455.1-201ENST00000565496 145 ntBASIC2.54□□□□□ -2
KDM1AO60341 AC073413.2-201ENST00000604332 360 ntBASIC2.54□□□□□ -2
KDM1AO60341 SNORD14A-201ENST00000606526 91 ntBASIC2.54□□□□□ -2
KDM1AO60341 MIR203B-201ENST00000636080 86 ntBASIC2.54□□□□□ -2
KDM1AO60341 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
KDM1AO60341 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
KDM1AO60341 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
KDM1AO60341 RNU6-923P-201ENST00000364753 107 ntBASIC2.53□□□□□ -2
KDM1AO60341 RNU4-17P-201ENST00000365598 141 ntBASIC2.53□□□□□ -2
KDM1AO60341 RNA5SP467-201ENST00000391274 118 ntBASIC2.53□□□□□ -2
KDM1AO60341 RPS15AP28-201ENST00000435088 386 ntBASIC2.53□□□□□ -2
KDM1AO60341 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.53□□□□□ -2
KDM1AO60341 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.53□□□□□ -2
KDM1AO60341 RNU7-99P-201ENST00000516271 62 ntBASIC2.53□□□□□ -2
KDM1AO60341 RNY3P16-201ENST00000516338 101 ntBASIC2.53□□□□□ -2
KDM1AO60341 AP002392.1-201ENST00000537692 208 ntBASIC2.53□□□□□ -2
KDM1AO60341 AC005786.1-201ENST00000588553 154 ntBASIC2.53□□□□□ -2
KDM1AO60341 AL033523.1-201ENST00000605153 153 ntBASIC2.53□□□□□ -2
KDM1AO60341 AC004792.1-201ENST00000614523 137 ntBASIC2.53□□□□□ -2
KDM1AO60341 AC245884.12-201ENST00000615364 59 ntBASIC2.53□□□□□ -2
KDM1AO60341 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.53□□□□□ -2
KDM1AO60341 AC068700.1-201ENST00000565862 3754 ntBASIC2.53□□□□□ -2
KDM1AO60341 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
KDM1AO60341 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
KDM1AO60341 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
KDM1AO60341 ZNF658B-202ENST00000615961 3375 ntBASIC2.52□□□□□ -2.01
KDM1AO60341 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
KDM1AO60341 RNU6-862P-201ENST00000362804 105 ntBASIC2.52□□□□□ -2.01
KDM1AO60341 SNORA33-201ENST00000363664 130 ntBASIC2.52□□□□□ -2.01
KDM1AO60341 RNU11-5P-201ENST00000391216 129 ntBASIC2.52□□□□□ -2.01
KDM1AO60341 RNU6-493P-201ENST00000391321 108 ntBASIC2.52□□□□□ -2.01
KDM1AO60341 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.52□□□□□ -2.01
KDM1AO60341 AC018634.1-201ENST00000437554 401 ntBASIC2.52□□□□□ -2.01
KDM1AO60341 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.52□□□□□ -2.01
KDM1AO60341 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.52□□□□□ -2.01
KDM1AO60341 MIR3162-201ENST00000581818 82 ntBASIC2.52□□□□□ -2.01
KDM1AO60341 POLR3GP1-201ENST00000594073 261 ntBASIC2.52□□□□□ -2.01
KDM1AO60341 MIR6840-201ENST00000611937 71 ntBASIC2.52□□□□□ -2.01
KDM1AO60341 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.52□□□□□ -2.01
KDM1AO60341 U4.3-201ENST00000621047 82 ntBASIC2.52□□□□□ -2.01
KDM1AO60341 AC022513.1-201ENST00000624512 117 ntBASIC2.52□□□□□ -2.01
KDM1AO60341 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.52□□□□□ -2.01
KDM1AO60341 AC007336.1-201ENST00000576365 3828 ntBASIC2.51□□□□□ -2.01
KDM1AO60341 AL596028.1-201ENST00000326971 197 ntBASIC2.51□□□□□ -2.01
KDM1AO60341 Y_RNA.111-201ENST00000363248 100 ntBASIC2.51□□□□□ -2.01
KDM1AO60341 RNU6-47P-201ENST00000383866 107 ntBASIC2.51□□□□□ -2.01
KDM1AO60341 RNU6-144P-201ENST00000383951 107 ntBASIC2.51□□□□□ -2.01
KDM1AO60341 SNORA6-201ENST00000384033 151 ntBASIC2.51□□□□□ -2.01
KDM1AO60341 SNORA8.3-201ENST00000384679 139 ntBASIC2.51□□□□□ -2.01
KDM1AO60341 MIR518A2-201ENST00000384966 87 ntBASIC2.51□□□□□ -2.01
KDM1AO60341 MIR526A2-201ENST00000390198 65 ntBASIC2.51□□□□□ -2.01
KDM1AO60341 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
KDM1AO60341 RNA5SP323-201ENST00000391094 133 ntBASIC2.51□□□□□ -2.01
KDM1AO60341 HMGN2P39-201ENST00000398005 273 ntBASIC2.51□□□□□ -2.01
KDM1AO60341 SNORA36B-201ENST00000410438 131 ntBASIC2.51□□□□□ -2.01
KDM1AO60341 RNU7-120P-201ENST00000459334 63 ntBASIC2.51□□□□□ -2.01
KDM1AO60341 RNU1-142P-201ENST00000516682 145 ntBASIC2.51□□□□□ -2.01
KDM1AO60341 AC024995.1-201ENST00000523014 93 ntBASIC2.51□□□□□ -2.01
KDM1AO60341 MIR4308-201ENST00000580634 81 ntBASIC2.51□□□□□ -2.01
KDM1AO60341 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.51□□□□□ -2.01
KDM1AO60341 AL137847.3-201ENST00000611521 109 ntBASIC2.51□□□□□ -2.01
KDM1AO60341 Y_RNA.802-201ENST00000614892 130 ntBASIC2.51□□□□□ -2.01
KDM1AO60341 FTX_2.1-201ENST00000618816 94 ntBASIC2.51□□□□□ -2.01
KDM1AO60341 U6.108-201ENST00000637764 58 ntBASIC2.51□□□□□ -2.01
KDM1AO60341 AP006437.1-201ENST00000641440 3685 ntBASIC2.5□□□□□ -2.01
KDM1AO60341 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
KDM1AO60341 MIR367-201ENST00000362299 68 ntBASIC2.5□□□□□ -2.01
KDM1AO60341 SNORA72-201ENST00000384339 132 ntBASIC2.5□□□□□ -2.01
KDM1AO60341 Y_RNA.510-201ENST00000384511 114 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms