Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 POLR3GP1-201ENST00000594073 261 ntBASIC3.02□□□□□ -1.93
SRGAP3O43295 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SRGAP3O43295 SNORD114-7-201ENST00000362520 77 ntBASIC3.01□□□□□ -1.93
SRGAP3O43295 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.01□□□□□ -1.93
SRGAP3O43295 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.01□□□□□ -1.93
SRGAP3O43295 RPS27P1-201ENST00000450552 247 ntBASIC3.01□□□□□ -1.93
SRGAP3O43295 SNORD65B-201ENST00000459126 73 ntBASIC3.01□□□□□ -1.93
SRGAP3O43295 RNU6-63P-201ENST00000516690 95 ntBASIC3.01□□□□□ -1.93
SRGAP3O43295 AP003357.1-201ENST00000604497 148 ntBASIC3.01□□□□□ -1.93
SRGAP3O43295 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.01□□□□□ -1.93
SRGAP3O43295 TUG1_4.1-201ENST00000619464 181 ntBASIC3.01□□□□□ -1.93
SRGAP3O43295 UCA1.1-201ENST00000620952 75 ntBASIC3.01□□□□□ -1.93
SRGAP3O43295 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
SRGAP3O43295 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SRGAP3O43295 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SRGAP3O43295 RNA5SP289-201ENST00000362332 137 ntBASIC3□□□□□ -1.93
SRGAP3O43295 Y_RNA.273-201ENST00000364703 102 ntBASIC3□□□□□ -1.93
SRGAP3O43295 Y_RNA.353-201ENST00000365440 108 ntBASIC3□□□□□ -1.93
SRGAP3O43295 RNU6-975P-201ENST00000384296 105 ntBASIC3□□□□□ -1.93
SRGAP3O43295 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3□□□□□ -1.93
SRGAP3O43295 CYCSP49-201ENST00000420810 319 ntBASIC3□□□□□ -1.93
SRGAP3O43295 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3□□□□□ -1.93
SRGAP3O43295 RNU7-197P-201ENST00000458836 62 ntBASIC3□□□□□ -1.93
SRGAP3O43295 RNU6-221P-201ENST00000459541 99 ntBASIC3□□□□□ -1.93
SRGAP3O43295 AC092991.1-201ENST00000477176 376 ntBASIC3□□□□□ -1.93
SRGAP3O43295 AC010598.1-201ENST00000510378 103 ntBASIC3□□□□□ -1.93
SRGAP3O43295 RNA5SP20-201ENST00000515976 84 ntBASIC3□□□□□ -1.93
SRGAP3O43295 AC005972.2-201ENST00000604690 348 ntBASIC3□□□□□ -1.93
SRGAP3O43295 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3□□□□□ -1.93
SRGAP3O43295 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3□□□□□ -1.93
SRGAP3O43295 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3□□□□□ -1.93
SRGAP3O43295 AL159152.1-201ENST00000635019 2587 ntBASIC3□□□□□ -1.93
SRGAP3O43295 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SRGAP3O43295 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SRGAP3O43295 AC092435.3-201ENST00000565538 3654 ntBASIC2.99□□□□□ -1.93
SRGAP3O43295 SNORD45.3-201ENST00000363836 72 ntBASIC2.99□□□□□ -1.93
SRGAP3O43295 RNU6-1180P-201ENST00000364935 107 ntBASIC2.99□□□□□ -1.93
SRGAP3O43295 Y_RNA.393-201ENST00000383936 102 ntBASIC2.99□□□□□ -1.93
SRGAP3O43295 RNU6-80P-201ENST00000384195 107 ntBASIC2.99□□□□□ -1.93
SRGAP3O43295 RNU6-588P-201ENST00000410281 105 ntBASIC2.99□□□□□ -1.93
SRGAP3O43295 AL135786.1-201ENST00000415892 214 ntBASIC2.99□□□□□ -1.93
SRGAP3O43295 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.99□□□□□ -1.93
SRGAP3O43295 RPS12P2-201ENST00000439728 269 ntBASIC2.99□□□□□ -1.93
SRGAP3O43295 RPL23AP58-201ENST00000440453 469 ntBASIC2.99□□□□□ -1.93
SRGAP3O43295 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.99□□□□□ -1.93
SRGAP3O43295 RNU6-437P-201ENST00000459408 95 ntBASIC2.99□□□□□ -1.93
SRGAP3O43295 RN7SL636P-201ENST00000497504 294 ntBASIC2.99□□□□□ -1.93
SRGAP3O43295 AC234781.5-201ENST00000508429 271 ntBASIC2.99□□□□□ -1.93
SRGAP3O43295 AC026436.1-201ENST00000510537 270 ntBASIC2.99□□□□□ -1.93
SRGAP3O43295 RNU2-56P-201ENST00000516826 190 ntBASIC2.99□□□□□ -1.93
SRGAP3O43295 MIR3646-201ENST00000578301 84 ntBASIC2.99□□□□□ -1.93
SRGAP3O43295 AC103810.6-201ENST00000606708 136 ntBASIC2.99□□□□□ -1.93
SRGAP3O43295 AC046143.2-201ENST00000609789 160 ntBASIC2.99□□□□□ -1.93
SRGAP3O43295 AC013412.1-201ENST00000610687 192 ntBASIC2.99□□□□□ -1.93
SRGAP3O43295 AC002064.3-201ENST00000623448 346 ntBASIC2.99□□□□□ -1.93
SRGAP3O43295 MIR1291-201ENST00000627649 87 ntBASIC2.99□□□□□ -1.93
SRGAP3O43295 AC110079.1-202ENST00000635213 138 ntBASIC2.99□□□□□ -1.93
SRGAP3O43295 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SRGAP3O43295 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SRGAP3O43295 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.98□□□□□ -1.93
SRGAP3O43295 RNU4-13P-201ENST00000364019 141 ntBASIC2.98□□□□□ -1.93
SRGAP3O43295 RNU4-41P-201ENST00000364426 143 ntBASIC2.98□□□□□ -1.93
SRGAP3O43295 SNORA14A-201ENST00000364773 135 ntBASIC2.98□□□□□ -1.93
SRGAP3O43295 RNU6-1323P-201ENST00000384025 107 ntBASIC2.98□□□□□ -1.93
SRGAP3O43295 SNORA79-201ENST00000408376 140 ntBASIC2.98□□□□□ -1.93
SRGAP3O43295 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.98□□□□□ -1.93
SRGAP3O43295 Y_RNA.686-201ENST00000516548 134 ntBASIC2.98□□□□□ -1.93
SRGAP3O43295 RNU6-965P-201ENST00000516721 96 ntBASIC2.98□□□□□ -1.93
SRGAP3O43295 RNU7-116P-201ENST00000516940 62 ntBASIC2.98□□□□□ -1.93
SRGAP3O43295 RNU6-586P-201ENST00000517265 104 ntBASIC2.98□□□□□ -1.93
SRGAP3O43295 AP001328.1-201ENST00000528550 176 ntBASIC2.98□□□□□ -1.93
SRGAP3O43295 AC012640.5-201ENST00000623897 319 ntBASIC2.98□□□□□ -1.93
SRGAP3O43295 AC010297.1-201ENST00000623948 149 ntBASIC2.98□□□□□ -1.93
SRGAP3O43295 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.98□□□□□ -1.93
SRGAP3O43295 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SRGAP3O43295 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.97□□□□□ -1.93
SRGAP3O43295 AC016717.2-201ENST00000609089 5141 ntBASIC2.97□□□□□ -1.93
SRGAP3O43295 SNORD31B-201ENST00000364977 69 ntBASIC2.97□□□□□ -1.93
SRGAP3O43295 RNU6-215P-201ENST00000365169 102 ntBASIC2.97□□□□□ -1.93
SRGAP3O43295 RNU6-438P-201ENST00000365561 103 ntBASIC2.97□□□□□ -1.93
SRGAP3O43295 DEFA7P-201ENST00000382676 285 ntBASIC2.97□□□□□ -1.93
SRGAP3O43295 RNY3P5-201ENST00000384127 102 ntBASIC2.97□□□□□ -1.93
SRGAP3O43295 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SRGAP3O43295 Y_RNA.587-201ENST00000391210 103 ntBASIC2.97□□□□□ -1.93
SRGAP3O43295 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SRGAP3O43295 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.97□□□□□ -1.93
SRGAP3O43295 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.97□□□□□ -1.93
SRGAP3O43295 MIR4474-201ENST00000579189 78 ntBASIC2.97□□□□□ -1.93
SRGAP3O43295 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.97□□□□□ -1.93
SRGAP3O43295 AC091564.4-201ENST00000533934 2194 ntBASIC2.97□□□□□ -1.93
SRGAP3O43295 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SRGAP3O43295 RNU6-418P-201ENST00000384035 107 ntBASIC2.96□□□□□ -1.94
SRGAP3O43295 MIR218-1-201ENST00000384999 110 ntBASIC2.96□□□□□ -1.94
SRGAP3O43295 SNORA75.5-201ENST00000391291 81 ntBASIC2.96□□□□□ -1.94
SRGAP3O43295 RNU4-43P-201ENST00000410628 137 ntBASIC2.96□□□□□ -1.94
SRGAP3O43295 AC007336.1-201ENST00000576365 3828 ntBASIC2.96□□□□□ -1.94
SRGAP3O43295 AC067747.1-201ENST00000608026 250 ntBASIC2.96□□□□□ -1.94
SRGAP3O43295 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.96□□□□□ -1.94
SRGAP3O43295 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.96□□□□□ -1.94
SRGAP3O43295 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms