Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 SNORA40.15-201ENST00000516884 107 ntBASIC2.18□□□□□ -2.06
APAF1O14727 RNU7-128P-201ENST00000517247 62 ntBASIC2.18□□□□□ -2.06
APAF1O14727 AC113195.1-201ENST00000579952 141 ntBASIC2.18□□□□□ -2.06
APAF1O14727 Y_RNA.812-201ENST00000610788 101 ntBASIC2.18□□□□□ -2.06
APAF1O14727 PART1_1.1-201ENST00000611761 217 ntBASIC2.18□□□□□ -2.06
APAF1O14727 Y_RNA.784-201ENST00000613803 101 ntBASIC2.18□□□□□ -2.06
APAF1O14727 Y_RNA.787-201ENST00000616522 101 ntBASIC2.18□□□□□ -2.06
APAF1O14727 Y_RNA.780-201ENST00000617336 101 ntBASIC2.18□□□□□ -2.06
APAF1O14727 Y_RNA.801-201ENST00000619005 101 ntBASIC2.18□□□□□ -2.06
APAF1O14727 AC022140.2-201ENST00000623500 188 ntBASIC2.18□□□□□ -2.06
APAF1O14727 AC127459.3-201ENST00000624328 466 ntBASIC2.18□□□□□ -2.06
APAF1O14727 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.18□□□□□ -2.06
APAF1O14727 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
APAF1O14727 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
APAF1O14727 SNORA33-201ENST00000363664 130 ntBASIC2.17□□□□□ -2.06
APAF1O14727 RNU6-324P-201ENST00000363957 106 ntBASIC2.17□□□□□ -2.06
APAF1O14727 RNU6-985P-201ENST00000410182 104 ntBASIC2.17□□□□□ -2.06
APAF1O14727 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.17□□□□□ -2.06
APAF1O14727 RNU6-764P-201ENST00000516396 105 ntBASIC2.17□□□□□ -2.06
APAF1O14727 SNORA25.15-201ENST00000516487 89 ntBASIC2.17□□□□□ -2.06
APAF1O14727 AC018630.2-201ENST00000534866 2403 ntBASIC2.17□□□□□ -2.06
APAF1O14727 RNU6-450P-201ENST00000364654 107 ntBASIC2.16□□□□□ -2.06
APAF1O14727 RNU2-61P-201ENST00000411069 191 ntBASIC2.16□□□□□ -2.06
APAF1O14727 RNU6-130P-201ENST00000411112 103 ntBASIC2.16□□□□□ -2.06
APAF1O14727 HSPE1P9-201ENST00000440046 311 ntBASIC2.16□□□□□ -2.06
APAF1O14727 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.16□□□□□ -2.06
APAF1O14727 RNU6-436P-201ENST00000516171 114 ntBASIC2.16□□□□□ -2.06
APAF1O14727 AP003072.1-201ENST00000531740 145 ntBASIC2.16□□□□□ -2.06
APAF1O14727 MIR376A1-201ENST00000616574 68 ntBASIC2.16□□□□□ -2.06
APAF1O14727 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.16□□□□□ -2.06
APAF1O14727 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
APAF1O14727 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
APAF1O14727 RNU6-414P-201ENST00000363705 104 ntBASIC2.15□□□□□ -2.07
APAF1O14727 Y_RNA.326-201ENST00000365176 113 ntBASIC2.15□□□□□ -2.07
APAF1O14727 RNU6-937P-201ENST00000384325 106 ntBASIC2.15□□□□□ -2.07
APAF1O14727 RNU6-505P-201ENST00000384427 107 ntBASIC2.15□□□□□ -2.07
APAF1O14727 Y_RNA.527-201ENST00000384573 102 ntBASIC2.15□□□□□ -2.07
APAF1O14727 RNU6-376P-201ENST00000384731 106 ntBASIC2.15□□□□□ -2.07
APAF1O14727 RNU6-1248P-201ENST00000391096 64 ntBASIC2.15□□□□□ -2.07
APAF1O14727 AL078595.1-201ENST00000404458 226 ntBASIC2.15□□□□□ -2.07
APAF1O14727 COX6CP10-201ENST00000416832 224 ntBASIC2.15□□□□□ -2.07
APAF1O14727 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.15□□□□□ -2.07
APAF1O14727 AC025465.3-201ENST00000510570 311 ntBASIC2.15□□□□□ -2.07
APAF1O14727 RNU6-897P-201ENST00000517135 105 ntBASIC2.15□□□□□ -2.07
APAF1O14727 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.15□□□□□ -2.07
APAF1O14727 AL162424.1-201ENST00000602325 221 ntBASIC2.15□□□□□ -2.07
APAF1O14727 AC073413.2-201ENST00000604332 360 ntBASIC2.15□□□□□ -2.07
APAF1O14727 RAC1P9-201ENST00000604990 392 ntBASIC2.15□□□□□ -2.07
APAF1O14727 RNA5SP190-201ENST00000365222 118 ntBASIC2.14□□□□□ -2.07
APAF1O14727 MIR520G-201ENST00000385064 90 ntBASIC2.14□□□□□ -2.07
APAF1O14727 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
APAF1O14727 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
APAF1O14727 snoU13.27-201ENST00000459278 104 ntBASIC2.14□□□□□ -2.07
APAF1O14727 SNORD13-201ENST00000459299 104 ntBASIC2.14□□□□□ -2.07
APAF1O14727 RNA5SP437-201ENST00000517249 129 ntBASIC2.14□□□□□ -2.07
APAF1O14727 MIR3198-2-201ENST00000577868 80 ntBASIC2.14□□□□□ -2.07
APAF1O14727 MIR502-201ENST00000606349 86 ntBASIC2.14□□□□□ -2.07
APAF1O14727 MIR7843-201ENST00000622274 79 ntBASIC2.14□□□□□ -2.07
APAF1O14727 RNU6-117P-201ENST00000365415 107 ntBASIC2.13□□□□□ -2.07
APAF1O14727 SNORD115-46-201ENST00000390982 71 ntBASIC2.13□□□□□ -2.07
APAF1O14727 RN7SKP200-201ENST00000410564 320 ntBASIC2.13□□□□□ -2.07
APAF1O14727 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.13□□□□□ -2.07
APAF1O14727 AC131281.1-201ENST00000522984 164 ntBASIC2.13□□□□□ -2.07
APAF1O14727 AL358944.1-201ENST00000528537 144 ntBASIC2.13□□□□□ -2.07
APAF1O14727 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.13□□□□□ -2.07
APAF1O14727 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.13□□□□□ -2.07
APAF1O14727 MIR4300-201ENST00000581016 96 ntBASIC2.13□□□□□ -2.07
APAF1O14727 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.13□□□□□ -2.07
APAF1O14727 MIR6079-201ENST00000635807 62 ntBASIC2.13□□□□□ -2.07
APAF1O14727 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
APAF1O14727 Y_RNA.124-201ENST00000363339 93 ntBASIC2.12□□□□□ -2.07
APAF1O14727 RN7SKP101-201ENST00000411376 320 ntBASIC2.12□□□□□ -2.07
APAF1O14727 AC245047.3-201ENST00000429428 127 ntBASIC2.12□□□□□ -2.07
APAF1O14727 RPS27P1-201ENST00000450552 247 ntBASIC2.12□□□□□ -2.07
APAF1O14727 MTND4LP30-201ENST00000454092 297 ntBASIC2.12□□□□□ -2.07
APAF1O14727 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.12□□□□□ -2.07
APAF1O14727 HMGB3P17-201ENST00000504195 649 ntBASIC2.12□□□□□ -2.07
APAF1O14727 RNU6-397P-201ENST00000516226 104 ntBASIC2.12□□□□□ -2.07
APAF1O14727 RNU6-341P-201ENST00000516973 96 ntBASIC2.12□□□□□ -2.07
APAF1O14727 MIR4709-201ENST00000577272 72 ntBASIC2.12□□□□□ -2.07
APAF1O14727 AC103810.8-201ENST00000607347 118 ntBASIC2.12□□□□□ -2.07
APAF1O14727 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.12□□□□□ -2.07
APAF1O14727 MIR8074-201ENST00000615081 81 ntBASIC2.12□□□□□ -2.07
APAF1O14727 AL359851.1-201ENST00000569460 4997 ntBASIC2.12□□□□□ -2.07
APAF1O14727 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
APAF1O14727 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
APAF1O14727 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
APAF1O14727 RNU1-17P-201ENST00000363022 152 ntBASIC2.11□□□□□ -2.07
APAF1O14727 RNU6-770P-201ENST00000363929 105 ntBASIC2.11□□□□□ -2.07
APAF1O14727 Y_RNA.329-201ENST00000365209 107 ntBASIC2.11□□□□□ -2.07
APAF1O14727 MIR30A-201ENST00000385092 71 ntBASIC2.11□□□□□ -2.07
APAF1O14727 MIR676-201ENST00000390702 67 ntBASIC2.11□□□□□ -2.07
APAF1O14727 RPL21P1-201ENST00000399532 476 ntBASIC2.11□□□□□ -2.07
APAF1O14727 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.11□□□□□ -2.07
APAF1O14727 RNU7-28P-201ENST00000516759 62 ntBASIC2.11□□□□□ -2.07
APAF1O14727 AC136932.1-201ENST00000574771 208 ntBASIC2.11□□□□□ -2.07
APAF1O14727 AC022217.4-201ENST00000604389 163 ntBASIC2.11□□□□□ -2.07
APAF1O14727 SNORA28-201ENST00000606769 126 ntBASIC2.11□□□□□ -2.07
APAF1O14727 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.11□□□□□ -2.07
APAF1O14727 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 202.4 ms