Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 SNORA40.15-201ENST00000516884 107 ntBASIC1.51□□□□□ -2.17
CDX4O14627 SUMO2P18-201ENST00000518873 252 ntBASIC1.51□□□□□ -2.17
CDX4O14627 AK6P2-201ENST00000549020 471 ntBASIC1.51□□□□□ -2.17
CDX4O14627 AC136932.1-201ENST00000574771 208 ntBASIC1.51□□□□□ -2.17
CDX4O14627 MIR3935-201ENST00000583472 104 ntBASIC1.51□□□□□ -2.17
CDX4O14627 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.51□□□□□ -2.17
CDX4O14627 Y_RNA.772-201ENST00000606692 102 ntBASIC1.51□□□□□ -2.17
CDX4O14627 AC010205.1-201ENST00000616668 449 ntBASIC1.51□□□□□ -2.17
CDX4O14627 AL590240.4-201ENST00000616908 390 ntBASIC1.51□□□□□ -2.17
CDX4O14627 AL353770.2-201ENST00000620024 78 ntBASIC1.51□□□□□ -2.17
CDX4O14627 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.51□□□□□ -2.17
CDX4O14627 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
CDX4O14627 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CDX4O14627 RNU6-626P-201ENST00000363354 107 ntBASIC1.5□□□□□ -2.17
CDX4O14627 Y_RNA.144-201ENST00000363521 113 ntBASIC1.5□□□□□ -2.17
CDX4O14627 Y_RNA.149-201ENST00000363558 117 ntBASIC1.5□□□□□ -2.17
CDX4O14627 Y_RNA.183-201ENST00000363882 113 ntBASIC1.5□□□□□ -2.17
CDX4O14627 RNU6-20P-201ENST00000384106 107 ntBASIC1.5□□□□□ -2.17
CDX4O14627 SNORA67.2-201ENST00000384300 149 ntBASIC1.5□□□□□ -2.17
CDX4O14627 RNU6-937P-201ENST00000384325 106 ntBASIC1.5□□□□□ -2.17
CDX4O14627 Y_RNA.498-201ENST00000384460 102 ntBASIC1.5□□□□□ -2.17
CDX4O14627 SNORA8-201ENST00000384574 139 ntBASIC1.5□□□□□ -2.17
CDX4O14627 MIR597-201ENST00000384968 97 ntBASIC1.5□□□□□ -2.17
CDX4O14627 MIR586-201ENST00000385035 97 ntBASIC1.5□□□□□ -2.17
CDX4O14627 RNA5SP212-201ENST00000391223 107 ntBASIC1.5□□□□□ -2.17
CDX4O14627 MRPL35P1-201ENST00000404272 572 ntBASIC1.5□□□□□ -2.17
CDX4O14627 MTCYBP9-201ENST00000431021 303 ntBASIC1.5□□□□□ -2.17
CDX4O14627 LINC01399-202ENST00000458450 244 ntBASIC1.5□□□□□ -2.17
CDX4O14627 MTCO2P24-201ENST00000515611 426 ntBASIC1.5□□□□□ -2.17
CDX4O14627 RNU6-948P-201ENST00000516374 107 ntBASIC1.5□□□□□ -2.17
CDX4O14627 RNU6-107P-201ENST00000516643 102 ntBASIC1.5□□□□□ -2.17
CDX4O14627 SNORA31.24-201ENST00000517232 57 ntBASIC1.5□□□□□ -2.17
CDX4O14627 AC018448.1-201ENST00000552843 316 ntBASIC1.5□□□□□ -2.17
CDX4O14627 AC055872.1-201ENST00000570978 278 ntBASIC1.5□□□□□ -2.17
CDX4O14627 MIR3169-201ENST00000578032 83 ntBASIC1.5□□□□□ -2.17
CDX4O14627 SNORD11B-201ENST00000607707 90 ntBASIC1.5□□□□□ -2.17
CDX4O14627 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.5□□□□□ -2.17
CDX4O14627 MIR6734-201ENST00000621166 68 ntBASIC1.5□□□□□ -2.17
CDX4O14627 AC091895.1-201ENST00000624494 256 ntBASIC1.5□□□□□ -2.17
CDX4O14627 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.5□□□□□ -2.17
CDX4O14627 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
CDX4O14627 RNU6-1305P-201ENST00000364353 104 ntBASIC1.49□□□□□ -2.17
CDX4O14627 MIR215-201ENST00000384858 110 ntBASIC1.49□□□□□ -2.17
CDX4O14627 RNA5SP489-201ENST00000410986 109 ntBASIC1.49□□□□□ -2.17
CDX4O14627 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.49□□□□□ -2.17
CDX4O14627 RPL21P38-201ENST00000418090 167 ntBASIC1.49□□□□□ -2.17
CDX4O14627 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.49□□□□□ -2.17
CDX4O14627 RNU6-625P-201ENST00000459412 107 ntBASIC1.49□□□□□ -2.17
CDX4O14627 RNA5SP57-201ENST00000459463 123 ntBASIC1.49□□□□□ -2.17
CDX4O14627 AP002001.1-203ENST00000534002 267 ntBASIC1.49□□□□□ -2.17
CDX4O14627 AC011604.1-201ENST00000545978 196 ntBASIC1.49□□□□□ -2.17
CDX4O14627 MIR4503-201ENST00000582187 83 ntBASIC1.49□□□□□ -2.17
CDX4O14627 PRR13P7-201ENST00000605538 430 ntBASIC1.49□□□□□ -2.17
CDX4O14627 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.49□□□□□ -2.17
CDX4O14627 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.49□□□□□ -2.17
CDX4O14627 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.49□□□□□ -2.17
CDX4O14627 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CDX4O14627 AC245060.5-201ENST00000610778 3293 ntBASIC1.48□□□□□ -2.17
CDX4O14627 AL159152.1-201ENST00000635019 2587 ntBASIC1.48□□□□□ -2.17
CDX4O14627 SNORD114-6-201ENST00000364393 72 ntBASIC1.48□□□□□ -2.17
CDX4O14627 Y_RNA.276-201ENST00000364732 109 ntBASIC1.48□□□□□ -2.17
CDX4O14627 SNORD48-201ENST00000364953 64 ntBASIC1.48□□□□□ -2.17
CDX4O14627 RNU6-196P-201ENST00000384315 107 ntBASIC1.48□□□□□ -2.17
CDX4O14627 RNU6-463P-201ENST00000384340 107 ntBASIC1.48□□□□□ -2.17
CDX4O14627 RNU6-1235P-201ENST00000384559 107 ntBASIC1.48□□□□□ -2.17
CDX4O14627 MIR548B-201ENST00000385247 97 ntBASIC1.48□□□□□ -2.17
CDX4O14627 MIR613-201ENST00000385248 95 ntBASIC1.48□□□□□ -2.17
CDX4O14627 SNORA48.1-201ENST00000390879 135 ntBASIC1.48□□□□□ -2.17
CDX4O14627 AC005002.2-201ENST00000438228 269 ntBASIC1.48□□□□□ -2.17
CDX4O14627 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.48□□□□□ -2.17
CDX4O14627 MTCO1P44-201ENST00000441935 243 ntBASIC1.48□□□□□ -2.17
CDX4O14627 AL731563.1-201ENST00000442202 214 ntBASIC1.48□□□□□ -2.17
CDX4O14627 RNU6-498P-201ENST00000459468 107 ntBASIC1.48□□□□□ -2.17
CDX4O14627 AC010531.2-201ENST00000465012 153 ntBASIC1.48□□□□□ -2.17
CDX4O14627 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CDX4O14627 AC074133.1-201ENST00000515696 183 ntBASIC1.48□□□□□ -2.17
CDX4O14627 AP003733.2-201ENST00000529409 171 ntBASIC1.48□□□□□ -2.17
CDX4O14627 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.48□□□□□ -2.17
CDX4O14627 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.48□□□□□ -2.17
CDX4O14627 MIR4300-201ENST00000581016 96 ntBASIC1.48□□□□□ -2.17
CDX4O14627 AC012493.3-201ENST00000604494 112 ntBASIC1.48□□□□□ -2.17
CDX4O14627 7SK.10-201ENST00000621414 298 ntBASIC1.48□□□□□ -2.17
CDX4O14627 AC008873.1-201ENST00000625051 138 ntBASIC1.48□□□□□ -2.17
CDX4O14627 AC068205.3-201ENST00000636385 468 ntBASIC1.48□□□□□ -2.17
CDX4O14627 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CDX4O14627 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CDX4O14627 MIR96-201ENST00000362288 78 ntBASIC1.47□□□□□ -2.17
CDX4O14627 Y_RNA.376-201ENST00000365638 108 ntBASIC1.47□□□□□ -2.17
CDX4O14627 Y_RNA.396-201ENST00000383949 103 ntBASIC1.47□□□□□ -2.17
CDX4O14627 SNORD115-46-201ENST00000390982 71 ntBASIC1.47□□□□□ -2.17
CDX4O14627 SUMO2P12-201ENST00000405924 140 ntBASIC1.47□□□□□ -2.17
CDX4O14627 RNU4-30P-201ENST00000410245 143 ntBASIC1.47□□□□□ -2.17
CDX4O14627 Y_RNA.602-201ENST00000410535 92 ntBASIC1.47□□□□□ -2.17
CDX4O14627 RNA5SP501-201ENST00000410990 112 ntBASIC1.47□□□□□ -2.17
CDX4O14627 RAB28P5-201ENST00000427490 651 ntBASIC1.47□□□□□ -2.17
CDX4O14627 AC016717.1-201ENST00000448918 286 ntBASIC1.47□□□□□ -2.17
CDX4O14627 HMGN2P9-201ENST00000476875 229 ntBASIC1.47□□□□□ -2.17
CDX4O14627 RN7SL274P-201ENST00000492268 272 ntBASIC1.47□□□□□ -2.17
CDX4O14627 RNU6-966P-201ENST00000516479 104 ntBASIC1.47□□□□□ -2.17
CDX4O14627 RNU6-856P-201ENST00000516959 98 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms