Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RNU7-87P-201ENST00000459343 62 ntBASIC1.2□□□□□ -2.22
CUX2O14529 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.2□□□□□ -2.22
CUX2O14529 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.2□□□□□ -2.22
CUX2O14529 MIR4438-201ENST00000585271 93 ntBASIC1.2□□□□□ -2.22
CUX2O14529 AC099654.5-201ENST00000636479 350 ntBASIC1.2□□□□□ -2.22
CUX2O14529 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CUX2O14529 RNU6-842P-201ENST00000384269 107 ntBASIC1.19□□□□□ -2.22
CUX2O14529 Y_RNA.498-201ENST00000384460 102 ntBASIC1.19□□□□□ -2.22
CUX2O14529 SNORD116-4-201ENST00000384733 96 ntBASIC1.19□□□□□ -2.22
CUX2O14529 AL356776.1-201ENST00000406574 447 ntBASIC1.19□□□□□ -2.22
CUX2O14529 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.19□□□□□ -2.22
CUX2O14529 USP9YP16-201ENST00000430287 407 ntBASIC1.19□□□□□ -2.22
CUX2O14529 USP9YP23-201ENST00000455085 407 ntBASIC1.19□□□□□ -2.22
CUX2O14529 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.19□□□□□ -2.22
CUX2O14529 AC091144.1-201ENST00000519573 138 ntBASIC1.19□□□□□ -2.22
CUX2O14529 AC023157.2-201ENST00000540596 141 ntBASIC1.19□□□□□ -2.22
CUX2O14529 AC093023.1-201ENST00000547375 507 ntBASIC1.19□□□□□ -2.22
CUX2O14529 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.19□□□□□ -2.22
CUX2O14529 MIR3664-201ENST00000579074 99 ntBASIC1.19□□□□□ -2.22
CUX2O14529 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CUX2O14529 Y_RNA.6-201ENST00000362350 114 ntBASIC1.18□□□□□ -2.22
CUX2O14529 RNU6-1059P-201ENST00000363752 98 ntBASIC1.18□□□□□ -2.22
CUX2O14529 MIR190B-201ENST00000401119 79 ntBASIC1.18□□□□□ -2.22
CUX2O14529 RNA5SP475-201ENST00000410568 110 ntBASIC1.18□□□□□ -2.22
CUX2O14529 RNU6-1148P-201ENST00000410992 104 ntBASIC1.18□□□□□ -2.22
CUX2O14529 PCNPP5-201ENST00000452246 481 ntBASIC1.18□□□□□ -2.22
CUX2O14529 RN7SKP88-201ENST00000516847 250 ntBASIC1.18□□□□□ -2.22
CUX2O14529 AF235103.2-201ENST00000525753 346 ntBASIC1.18□□□□□ -2.22
CUX2O14529 AL512310.8-201ENST00000550183 120 ntBASIC1.18□□□□□ -2.22
CUX2O14529 AC018638.8-201ENST00000588755 281 ntBASIC1.18□□□□□ -2.22
CUX2O14529 7SK.8-201ENST00000612110 250 ntBASIC1.18□□□□□ -2.22
CUX2O14529 7SK.11-201ENST00000615477 250 ntBASIC1.18□□□□□ -2.22
CUX2O14529 7SK.13-201ENST00000622040 250 ntBASIC1.18□□□□□ -2.22
CUX2O14529 AC073869.6-201ENST00000640656 341 ntBASIC1.18□□□□□ -2.22
CUX2O14529 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
CUX2O14529 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CUX2O14529 MIR548F1-201ENST00000408667 84 ntBASIC1.18□□□□□ -2.22
CUX2O14529 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.18□□□□□ -2.22
CUX2O14529 MTND1P17-201ENST00000448961 204 ntBASIC1.18□□□□□ -2.22
CUX2O14529 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.18□□□□□ -2.22
CUX2O14529 RPS29P25-201ENST00000481709 171 ntBASIC1.18□□□□□ -2.22
CUX2O14529 RNU6-1114P-201ENST00000516022 107 ntBASIC1.18□□□□□ -2.22
CUX2O14529 AC019288.1-201ENST00000557918 224 ntBASIC1.18□□□□□ -2.22
CUX2O14529 AC006435.5-201ENST00000624486 112 ntBASIC1.18□□□□□ -2.22
CUX2O14529 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
CUX2O14529 RNU6-1050P-201ENST00000410388 107 ntBASIC1.17□□□□□ -2.22
CUX2O14529 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.17□□□□□ -2.22
CUX2O14529 AC117454.1-201ENST00000491120 168 ntBASIC1.17□□□□□ -2.22
CUX2O14529 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.17□□□□□ -2.22
CUX2O14529 AC018462.2-201ENST00000605375 395 ntBASIC1.17□□□□□ -2.22
CUX2O14529 SNORA28-201ENST00000606769 126 ntBASIC1.17□□□□□ -2.22
CUX2O14529 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.17□□□□□ -2.22
CUX2O14529 AC007014.2-201ENST00000615581 479 ntBASIC1.17□□□□□ -2.22
CUX2O14529 SNORD3E-202ENST00000627253 216 ntBASIC1.17□□□□□ -2.22
CUX2O14529 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CUX2O14529 Y_RNA.86-201ENST00000363020 111 ntBASIC1.16□□□□□ -2.22
CUX2O14529 MTCYBP10-201ENST00000424905 650 ntBASIC1.16□□□□□ -2.22
CUX2O14529 RPL23AP50-201ENST00000434149 455 ntBASIC1.16□□□□□ -2.22
CUX2O14529 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.16□□□□□ -2.22
CUX2O14529 AC046134.1-201ENST00000514454 666 ntBASIC1.16□□□□□ -2.22
CUX2O14529 PISRT1.1-201ENST00000616930 107 ntBASIC1.16□□□□□ -2.22
CUX2O14529 RNA5SP327-201ENST00000362494 101 ntBASIC1.15□□□□□ -2.23
CUX2O14529 Y_RNA.265-201ENST00000364677 108 ntBASIC1.15□□□□□ -2.23
CUX2O14529 SNORD114-15-201ENST00000364687 72 ntBASIC1.15□□□□□ -2.23
CUX2O14529 Y_RNA.364-201ENST00000365532 101 ntBASIC1.15□□□□□ -2.23
CUX2O14529 RNU6-1145P-201ENST00000384246 107 ntBASIC1.15□□□□□ -2.23
CUX2O14529 TRBVB-201ENST00000477100 408 ntBASIC1.15□□□□□ -2.23
CUX2O14529 MTND5P5-201ENST00000503764 376 ntBASIC1.15□□□□□ -2.23
CUX2O14529 AC026782.1-201ENST00000512952 449 ntBASIC1.15□□□□□ -2.23
CUX2O14529 AC013244.2-201ENST00000603396 103 ntBASIC1.15□□□□□ -2.23
CUX2O14529 AL513534.2-201ENST00000603836 250 ntBASIC1.15□□□□□ -2.23
CUX2O14529 RNY1P16-201ENST00000363063 111 ntBASIC1.14□□□□□ -2.23
CUX2O14529 RNU6-879P-201ENST00000364328 108 ntBASIC1.14□□□□□ -2.23
CUX2O14529 Y_RNA.557-201ENST00000384680 107 ntBASIC1.14□□□□□ -2.23
CUX2O14529 MIR1277-201ENST00000408536 78 ntBASIC1.14□□□□□ -2.23
CUX2O14529 MTND3P8-201ENST00000412909 339 ntBASIC1.14□□□□□ -2.23
CUX2O14529 EIF1P2-201ENST00000428233 350 ntBASIC1.14□□□□□ -2.23
CUX2O14529 HSPE1P13-201ENST00000451143 297 ntBASIC1.14□□□□□ -2.23
CUX2O14529 AC074133.1-201ENST00000515696 183 ntBASIC1.14□□□□□ -2.23
CUX2O14529 RNA5SP20-201ENST00000515976 84 ntBASIC1.14□□□□□ -2.23
CUX2O14529 RNU7-172P-201ENST00000517125 64 ntBASIC1.14□□□□□ -2.23
CUX2O14529 MIR3684-201ENST00000579779 74 ntBASIC1.14□□□□□ -2.23
CUX2O14529 AC005899.2-201ENST00000584353 90 ntBASIC1.14□□□□□ -2.23
CUX2O14529 AC243829.6-201ENST00000612652 106 ntBASIC1.14□□□□□ -2.23
CUX2O14529 AC106754.2-201ENST00000623006 233 ntBASIC1.14□□□□□ -2.23
CUX2O14529 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.14□□□□□ -2.23
CUX2O14529 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CUX2O14529 SNORA20B-201ENST00000384220 132 ntBASIC1.13□□□□□ -2.23
CUX2O14529 Y_RNA.473-201ENST00000384333 102 ntBASIC1.13□□□□□ -2.23
CUX2O14529 MIR562-201ENST00000384894 95 ntBASIC1.13□□□□□ -2.23
CUX2O14529 MIR329-1-201ENST00000385028 80 ntBASIC1.13□□□□□ -2.23
CUX2O14529 TOMM22P2-201ENST00000430735 237 ntBASIC1.13□□□□□ -2.23
CUX2O14529 UQCRBP2-201ENST00000447827 297 ntBASIC1.13□□□□□ -2.23
CUX2O14529 AC107399.1-201ENST00000451226 265 ntBASIC1.13□□□□□ -2.23
CUX2O14529 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.13□□□□□ -2.23
CUX2O14529 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.13□□□□□ -2.23
CUX2O14529 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.13□□□□□ -2.23
CUX2O14529 MIR4514-201ENST00000581410 57 ntBASIC1.13□□□□□ -2.23
CUX2O14529 AC073349.3-201ENST00000617616 186 ntBASIC1.13□□□□□ -2.23
CUX2O14529 AL513423.1-201ENST00000621695 132 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms