Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 RNU6-468P-201ENST00000384003 109 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 RNU6-480P-201ENST00000384332 107 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 RNU6-424P-201ENST00000384367 105 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 MIR802-201ENST00000390235 94 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 MIR208B-201ENST00000401172 77 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 MIR1185-2-201ENST00000408687 86 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.3□□□□□ -2.46
CACNA1AO00555 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 RNU7-182P-201ENST00000459009 62 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 snoU13.2-201ENST00000459201 104 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 RNU6-803P-201ENST00000516034 102 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 RNU6-1102P-201ENST00000516149 96 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 SNORD27.1-201ENST00000516319 72 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 RNU6-1225P-201ENST00000516336 65 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 RNU6-897P-201ENST00000517135 105 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 AC105029.1-201ENST00000520250 669 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.3□□□□□ -2.46
CACNA1AO00555 MTND3P13-201ENST00000574391 343 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.3□□□□□ -2.46
CACNA1AO00555 Z94722.1-201ENST00000604328 474 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 AC108747.1-201ENST00000609508 535 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 AC023158.2-201ENST00000614876 543 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 RNU6-187P-201ENST00000384139 106 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 MIR570-201ENST00000384917 97 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
CACNA1AO00555 RNU4-30P-201ENST00000410245 143 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 RNU7-62P-201ENST00000458856 62 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 SNORD65B-201ENST00000459126 73 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 RNA5SP216-201ENST00000516111 123 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 RNU6-118P-201ENST00000516552 102 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 RNU6-344P-201ENST00000516635 111 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 AL358944.1-201ENST00000528537 144 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.3□□□□□ -2.46
CACNA1AO00555 MIR378D2-201ENST00000580636 98 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 AC090897.1-201ENST00000580909 226 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 AC010205.1-201ENST00000616668 449 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 AC022418.1-201ENST00000624118 445 ntBASIC-0.3□□□□□ -2.46
CACNA1AO00555 SNORD45.3-201ENST00000363836 72 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 RNU6-371P-201ENST00000364283 108 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 RNU6-245P-201ENST00000384020 107 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.31□□□□□ -2.46
CACNA1AO00555 AL365184.2-201ENST00000431139 435 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 MTND4P32-201ENST00000437189 1237 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 AC004386.2-201ENST00000441858 148 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 BTBD7P2-201ENST00000441962 620 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 RPL39P25-201ENST00000449384 154 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 AL031274.1-201ENST00000450334 232 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
CACNA1AO00555 AF186996.7-201ENST00000492781 209 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 RNU7-129P-201ENST00000516128 62 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 RNU7-43P-201ENST00000516554 64 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 RNU7-51P-201ENST00000516560 62 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 MIR3152-201ENST00000579801 74 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 VN1R87P-201ENST00000596706 487 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 AP000907.4-201ENST00000604143 237 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 uc_338.28-201ENST00000612082 187 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 uc_338.4-201ENST00000616635 176 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 AL445523.1-201ENST00000451184 1362 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 RNU6-580P-201ENST00000365159 107 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 SNORA36A-201ENST00000384221 132 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.31□□□□□ -2.46
CACNA1AO00555 AC114491.1-201ENST00000416095 246 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.31□□□□□ -2.46
CACNA1AO00555 MTND1P14-201ENST00000427400 950 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 SNAP23P1-201ENST00000433229 246 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 MTND4P18-201ENST00000447010 465 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 RNU7-102P-201ENST00000458948 62 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 RNU7-185P-201ENST00000459215 60 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 AC005178.1-201ENST00000508392 440 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.31□□□□□ -2.46
CACNA1AO00555 AC018448.1-201ENST00000552843 316 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 MIR4306-201ENST00000583390 91 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 AC174048.1-201ENST00000603389 144 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 AC245008.1-201ENST00000608123 476 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 AC063944.3-201ENST00000609969 533 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 AC097478.2-201ENST00000610572 514 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 AC006441.5-201ENST00000612680 209 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 U6.73-201ENST00000619194 103 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 AC006504.8-201ENST00000621046 635 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 AC068880.4-201ENST00000623082 495 ntBASIC-0.31□□□□□ -2.46
CACNA1AO00555 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 SNORA67.2-201ENST00000384300 149 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 RNU6-540P-201ENST00000384622 101 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 RPS29P13-201ENST00000402041 169 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms