Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 MIR373-201ENST00000362273 69 ntBASIC1.03□□□□□ -2.24
DDX39AO00148 RNU6-874P-201ENST00000362390 105 ntBASIC1.03□□□□□ -2.24
DDX39AO00148 Y_RNA.116-201ENST00000363292 103 ntBASIC1.03□□□□□ -2.24
DDX39AO00148 RNU6-601P-201ENST00000384540 107 ntBASIC1.03□□□□□ -2.24
DDX39AO00148 MIR548F5-201ENST00000408421 86 ntBASIC1.03□□□□□ -2.24
DDX39AO00148 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.03□□□□□ -2.24
DDX39AO00148 POLR2J4-204ENST00000418424 324 ntBASIC1.03□□□□□ -2.24
DDX39AO00148 AC104332.1-201ENST00000440471 797 ntBASIC1.03□□□□□ -2.24
DDX39AO00148 AC233266.1-201ENST00000454518 96 ntBASIC1.03□□□□□ -2.24
DDX39AO00148 AL049830.1-201ENST00000468034 425 ntBASIC1.03□□□□□ -2.24
DDX39AO00148 Y_RNA.670-201ENST00000516255 105 ntBASIC1.03□□□□□ -2.24
DDX39AO00148 AL358944.1-201ENST00000528537 144 ntBASIC1.03□□□□□ -2.24
DDX39AO00148 AC242852.1-201ENST00000612151 96 ntBASIC1.03□□□□□ -2.24
DDX39AO00148 AC244015.1-201ENST00000622301 99 ntBASIC1.03□□□□□ -2.24
DDX39AO00148 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.03□□□□□ -2.24
DDX39AO00148 Y_RNA.86-201ENST00000363020 111 ntBASIC1.02□□□□□ -2.25
DDX39AO00148 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
DDX39AO00148 SNORA80D-201ENST00000384488 135 ntBASIC1.02□□□□□ -2.25
DDX39AO00148 MIR532-201ENST00000385025 91 ntBASIC1.02□□□□□ -2.25
DDX39AO00148 MIR548K-201ENST00000408406 116 ntBASIC1.02□□□□□ -2.25
DDX39AO00148 MIR1277-201ENST00000408536 78 ntBASIC1.02□□□□□ -2.25
DDX39AO00148 RNU5A-5P-201ENST00000411054 116 ntBASIC1.02□□□□□ -2.25
DDX39AO00148 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.02□□□□□ -2.25
DDX39AO00148 AC092423.1-201ENST00000430165 186 ntBASIC1.02□□□□□ -2.25
DDX39AO00148 AC002429.1-201ENST00000437672 148 ntBASIC1.02□□□□□ -2.25
DDX39AO00148 AC107399.1-201ENST00000451226 265 ntBASIC1.02□□□□□ -2.25
DDX39AO00148 AC011352.1-201ENST00000512300 793 ntBASIC1.02□□□□□ -2.25
DDX39AO00148 SNORA40.9-201ENST00000515895 93 ntBASIC1.02□□□□□ -2.25
DDX39AO00148 Y_RNA.655-201ENST00000515919 96 ntBASIC1.02□□□□□ -2.25
DDX39AO00148 AP002001.1-203ENST00000534002 267 ntBASIC1.02□□□□□ -2.25
DDX39AO00148 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.02□□□□□ -2.25
DDX39AO00148 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.02□□□□□ -2.25
DDX39AO00148 AL117336.2-201ENST00000602435 335 ntBASIC1.02□□□□□ -2.25
DDX39AO00148 MIRLET7C-201ENST00000362160 84 ntBASIC1.01□□□□□ -2.25
DDX39AO00148 Y_RNA.6-201ENST00000362350 114 ntBASIC1.01□□□□□ -2.25
DDX39AO00148 SNORD114-24-201ENST00000365029 72 ntBASIC1.01□□□□□ -2.25
DDX39AO00148 Y_RNA.358-201ENST00000365491 99 ntBASIC1.01□□□□□ -2.25
DDX39AO00148 MIR518E-201ENST00000385252 88 ntBASIC1.01□□□□□ -2.25
DDX39AO00148 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.01□□□□□ -2.25
DDX39AO00148 MTND1P34-201ENST00000438556 671 ntBASIC1.01□□□□□ -2.25
DDX39AO00148 LINC01399-202ENST00000458450 244 ntBASIC1.01□□□□□ -2.25
DDX39AO00148 SNORD124-201ENST00000459577 104 ntBASIC1.01□□□□□ -2.25
DDX39AO00148 SCARNA16.2-201ENST00000516520 172 ntBASIC1.01□□□□□ -2.25
DDX39AO00148 RNU6-1096P-201ENST00000517089 102 ntBASIC1.01□□□□□ -2.25
DDX39AO00148 AC011604.1-201ENST00000545978 196 ntBASIC1.01□□□□□ -2.25
DDX39AO00148 AL078603.1-201ENST00000603824 313 ntBASIC1.01□□□□□ -2.25
DDX39AO00148 AC005828.6-201ENST00000606610 232 ntBASIC1.01□□□□□ -2.25
DDX39AO00148 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.01□□□□□ -2.25
DDX39AO00148 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.01□□□□□ -2.25
DDX39AO00148 RNU6-117P-201ENST00000365415 107 ntBASIC1□□□□□ -2.25
DDX39AO00148 Y_RNA.363-201ENST00000365529 113 ntBASIC1□□□□□ -2.25
DDX39AO00148 MIR200A-201ENST00000384875 90 ntBASIC1□□□□□ -2.25
DDX39AO00148 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1□□□□□ -2.25
DDX39AO00148 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1□□□□□ -2.25
DDX39AO00148 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1□□□□□ -2.25
DDX39AO00148 U8.22-201ENST00000459141 133 ntBASIC1□□□□□ -2.25
DDX39AO00148 SNORD111.1-201ENST00000516421 86 ntBASIC1□□□□□ -2.25
DDX39AO00148 RNU6-307P-201ENST00000516743 106 ntBASIC1□□□□□ -2.25
DDX39AO00148 AC005899.2-201ENST00000584353 90 ntBASIC1□□□□□ -2.25
DDX39AO00148 AC068790.6-201ENST00000602558 258 ntBASIC1□□□□□ -2.25
DDX39AO00148 AC211469.2-201ENST00000605461 205 ntBASIC1□□□□□ -2.25
DDX39AO00148 AC009229.3-201ENST00000608056 282 ntBASIC1□□□□□ -2.25
DDX39AO00148 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1□□□□□ -2.25
DDX39AO00148 AC002553.4-201ENST00000616896 331 ntBASIC1□□□□□ -2.25
DDX39AO00148 AC073869.6-201ENST00000640656 341 ntBASIC1□□□□□ -2.25
DDX39AO00148 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
DDX39AO00148 SNORD114-7-201ENST00000362520 77 ntBASIC0.99□□□□□ -2.25
DDX39AO00148 Y_RNA.124-201ENST00000363339 93 ntBASIC0.99□□□□□ -2.25
DDX39AO00148 RNU6-454P-201ENST00000364292 107 ntBASIC0.99□□□□□ -2.25
DDX39AO00148 RNU4-41P-201ENST00000364426 143 ntBASIC0.99□□□□□ -2.25
DDX39AO00148 Y_RNA.269-201ENST00000364685 89 ntBASIC0.99□□□□□ -2.25
DDX39AO00148 RNU6-1310P-201ENST00000384153 107 ntBASIC0.99□□□□□ -2.25
DDX39AO00148 MIR891A-201ENST00000401237 79 ntBASIC0.99□□□□□ -2.25
DDX39AO00148 MTND3P8-201ENST00000412909 339 ntBASIC0.99□□□□□ -2.25
DDX39AO00148 RPL7P42-201ENST00000481005 679 ntBASIC0.99□□□□□ -2.25
DDX39AO00148 CYCTP-201ENST00000504253 315 ntBASIC0.99□□□□□ -2.25
DDX39AO00148 PDCD5P2-201ENST00000507570 312 ntBASIC0.99□□□□□ -2.25
DDX39AO00148 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.99□□□□□ -2.25
DDX39AO00148 SNORA4-201ENST00000584302 138 ntBASIC0.99□□□□□ -2.25
DDX39AO00148 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.99□□□□□ -2.25
DDX39AO00148 AL020996.3-201ENST00000606617 222 ntBASIC0.99□□□□□ -2.25
DDX39AO00148 PISRT1.1-201ENST00000616930 107 ntBASIC0.99□□□□□ -2.25
DDX39AO00148 RNU6-318P-201ENST00000384283 103 ntBASIC0.98□□□□□ -2.25
DDX39AO00148 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.98□□□□□ -2.25
DDX39AO00148 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.98□□□□□ -2.25
DDX39AO00148 AF235103.2-201ENST00000525753 346 ntBASIC0.98□□□□□ -2.25
DDX39AO00148 AC004832.4-201ENST00000608952 331 ntBASIC0.98□□□□□ -2.25
DDX39AO00148 AC007014.2-201ENST00000615581 479 ntBASIC0.98□□□□□ -2.25
DDX39AO00148 Y_RNA.122-201ENST00000363331 96 ntBASIC0.97□□□□□ -2.25
DDX39AO00148 RNU6-833P-201ENST00000363486 107 ntBASIC0.97□□□□□ -2.25
DDX39AO00148 RNU1-36P-201ENST00000365130 165 ntBASIC0.97□□□□□ -2.25
DDX39AO00148 Y_RNA.355-201ENST00000365462 98 ntBASIC0.97□□□□□ -2.25
DDX39AO00148 Y_RNA.482-201ENST00000384377 111 ntBASIC0.97□□□□□ -2.25
DDX39AO00148 RNY1P14-201ENST00000384426 108 ntBASIC0.97□□□□□ -2.25
DDX39AO00148 MIR548J-201ENST00000408833 112 ntBASIC0.97□□□□□ -2.25
DDX39AO00148 SNORD12B-201ENST00000410433 91 ntBASIC0.97□□□□□ -2.25
DDX39AO00148 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.97□□□□□ -2.25
DDX39AO00148 RPL23AP50-201ENST00000434149 455 ntBASIC0.97□□□□□ -2.25
DDX39AO00148 Z98949.2-201ENST00000440996 144 ntBASIC0.97□□□□□ -2.25
DDX39AO00148 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms