Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC093023.1-201ENST00000547375 507 ntBASIC0.33□□□□□ -2.36
RBFOX3A6NFN3 MIR7111-201ENST00000619751 72 ntBASIC0.33□□□□□ -2.36
RBFOX3A6NFN3 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.33□□□□□ -2.36
RBFOX3A6NFN3 MIR6863-201ENST00000636112 90 ntBASIC0.33□□□□□ -2.36
RBFOX3A6NFN3 ZNF299P-201ENST00000406845 1804 ntBASIC0.33□□□□□ -2.36
RBFOX3A6NFN3 SNORD114-7-201ENST00000362520 77 ntBASIC0.32□□□□□ -2.36
RBFOX3A6NFN3 RNU6-595P-201ENST00000363944 107 ntBASIC0.32□□□□□ -2.36
RBFOX3A6NFN3 U8.5-201ENST00000364528 136 ntBASIC0.32□□□□□ -2.36
RBFOX3A6NFN3 Y_RNA.359-201ENST00000365498 102 ntBASIC0.32□□□□□ -2.36
RBFOX3A6NFN3 RNU6-1297P-201ENST00000384415 104 ntBASIC0.32□□□□□ -2.36
RBFOX3A6NFN3 PIGPP3-201ENST00000425307 415 ntBASIC0.32□□□□□ -2.36
RBFOX3A6NFN3 AC098934.3-201ENST00000430450 190 ntBASIC0.32□□□□□ -2.36
RBFOX3A6NFN3 AC092628.1-201ENST00000436250 252 ntBASIC0.32□□□□□ -2.36
RBFOX3A6NFN3 UQCRBP2-201ENST00000447827 297 ntBASIC0.32□□□□□ -2.36
RBFOX3A6NFN3 RNU7-41P-201ENST00000515917 61 ntBASIC0.32□□□□□ -2.36
RBFOX3A6NFN3 RNU11-2P-201ENST00000516898 142 ntBASIC0.32□□□□□ -2.36
RBFOX3A6NFN3 AC036111.3-201ENST00000526389 112 ntBASIC0.32□□□□□ -2.36
RBFOX3A6NFN3 AC023442.1-201ENST00000531247 422 ntBASIC0.32□□□□□ -2.36
RBFOX3A6NFN3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.32□□□□□ -2.36
RBFOX3A6NFN3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.32□□□□□ -2.36
RBFOX3A6NFN3 AC010525.2-201ENST00000590920 195 ntBASIC0.32□□□□□ -2.36
RBFOX3A6NFN3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.32□□□□□ -2.36
RBFOX3A6NFN3 AL359880.1-201ENST00000621879 266 ntBASIC0.32□□□□□ -2.36
RBFOX3A6NFN3 U6.115-201ENST00000636045 103 ntBASIC0.32□□□□□ -2.36
RBFOX3A6NFN3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 RNU6-1252P-201ENST00000363054 104 ntBASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 Y_RNA.373-201ENST00000365600 103 ntBASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 RNU6-342P-201ENST00000384521 104 ntBASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 Y_RNA.533-201ENST00000384596 114 ntBASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 MIR520C-201ENST00000385005 87 ntBASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 MIR15B-201ENST00000385045 98 ntBASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 MTCO3P40-201ENST00000392516 676 ntBASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 MIR936-201ENST00000401264 98 ntBASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 SNORD111-201ENST00000408139 94 ntBASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 MIR1298-201ENST00000408783 112 ntBASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 MRPS18CP6-201ENST00000423587 223 ntBASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 MTND4LP16-201ENST00000440828 295 ntBASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 RPS20P10-201ENST00000451209 253 ntBASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 PCNPP5-201ENST00000452246 481 ntBASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 AC114811.1-201ENST00000507207 168 ntBASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 AC090617.3-201ENST00000573670 475 ntBASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 MIR4762-201ENST00000585261 75 ntBASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 AC125232.2-201ENST00000592457 143 ntBASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 AC119751.7-201ENST00000600494 245 ntBASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 DISC2.1-201ENST00000612827 205 ntBASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
RBFOX3A6NFN3 MTND5P26-201ENST00000426018 1752 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 RNU6-222P-201ENST00000362438 107 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 Y_RNA.77-201ENST00000362962 107 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 SNORA25.3-201ENST00000363205 127 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 Y_RNA.212-201ENST00000364177 102 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 AC117470.1-201ENST00000381974 330 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 SNORA50A-201ENST00000384225 134 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 RNY1P4-201ENST00000384595 115 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 MIR329-1-201ENST00000385028 80 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 MIR1827-201ENST00000408549 66 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 Y_RNA.615-201ENST00000410769 117 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 RNU6-1001P-201ENST00000411265 100 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 AC244023.1-201ENST00000426884 112 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 AC010424.1-201ENST00000506336 297 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 AC074133.1-201ENST00000515696 183 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 RNU6-496P-201ENST00000516145 99 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 Y_RNA.706-201ENST00000516933 99 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 AF235103.2-201ENST00000525753 346 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 AC011195.1-201ENST00000578177 177 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 AC242498.1-201ENST00000604134 111 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 AC100812.1-201ENST00000607622 580 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 RNU6-94P-201ENST00000607728 107 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 AC243829.6-201ENST00000612652 106 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 AC243994.1-201ENST00000618627 109 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 MTND5P16-201ENST00000460269 1703 ntBASIC0.3□□□□□ -2.36
RBFOX3A6NFN3 Y_RNA.36-201ENST00000362602 112 ntBASIC0.29□□□□□ -2.36
RBFOX3A6NFN3 SNORD114-23-201ENST00000363536 72 ntBASIC0.29□□□□□ -2.36
RBFOX3A6NFN3 SNORD14.1-201ENST00000365609 90 ntBASIC0.29□□□□□ -2.36
RBFOX3A6NFN3 RNU6-1119P-201ENST00000384349 108 ntBASIC0.29□□□□□ -2.36
RBFOX3A6NFN3 DEFB108C-201ENST00000400154 252 ntBASIC0.29□□□□□ -2.36
RBFOX3A6NFN3 MTND2P9-201ENST00000422293 931 ntBASIC0.29□□□□□ -2.36
RBFOX3A6NFN3 EIF1P2-201ENST00000428233 350 ntBASIC0.29□□□□□ -2.36
RBFOX3A6NFN3 RNU7-43P-201ENST00000516554 64 ntBASIC0.29□□□□□ -2.36
RBFOX3A6NFN3 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.29□□□□□ -2.36
RBFOX3A6NFN3 AL512360.1-201ENST00000555346 234 ntBASIC0.29□□□□□ -2.36
RBFOX3A6NFN3 AC006362.1-201ENST00000567392 174 ntBASIC0.29□□□□□ -2.36
RBFOX3A6NFN3 MIR4764-201ENST00000580680 88 ntBASIC0.29□□□□□ -2.36
RBFOX3A6NFN3 RN7SL793P-201ENST00000583259 296 ntBASIC0.29□□□□□ -2.36
RBFOX3A6NFN3 MIR3672-201ENST00000584290 82 ntBASIC0.29□□□□□ -2.36
RBFOX3A6NFN3 AC124864.2-201ENST00000624736 186 ntBASIC0.29□□□□□ -2.36
RBFOX3A6NFN3 AC090582.1-201ENST00000636321 199 ntBASIC0.29□□□□□ -2.36
RBFOX3A6NFN3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
RBFOX3A6NFN3 SNORD68-201ENST00000363214 84 ntBASIC0.28□□□□□ -2.36
RBFOX3A6NFN3 Y_RNA.256-201ENST00000364594 104 ntBASIC0.28□□□□□ -2.36
RBFOX3A6NFN3 Y_RNA.393-201ENST00000383936 102 ntBASIC0.28□□□□□ -2.36
RBFOX3A6NFN3 RNU6-1145P-201ENST00000384246 107 ntBASIC0.28□□□□□ -2.36
RBFOX3A6NFN3 MIR136-201ENST00000385207 82 ntBASIC0.28□□□□□ -2.36
RBFOX3A6NFN3 SNORD105-201ENST00000386910 85 ntBASIC0.28□□□□□ -2.36
RBFOX3A6NFN3 RNU6-994P-201ENST00000410507 111 ntBASIC0.28□□□□□ -2.36
RBFOX3A6NFN3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.28□□□□□ -2.36
RBFOX3A6NFN3 RNU4-57P-201ENST00000515980 135 ntBASIC0.28□□□□□ -2.36
RBFOX3A6NFN3 MIR4711-201ENST00000578274 70 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms