Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 ERLEC1P1-201ENST00000433806 578 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 MTATP6P13-201ENST00000438531 667 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-63P-201ENST00000516690 95 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 AL358944.1-201ENST00000528537 144 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 AC093023.1-201ENST00000547375 507 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 ZNF519P2-201ENST00000557032 169 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 MIR4760-201ENST00000585040 80 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 AC125232.2-201ENST00000592457 143 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 AC007742.2-201ENST00000618226 398 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 U6.115-201ENST00000636045 103 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
TRAV41A0A0B4J266 AC073544.1-201ENST00000600110 1595 ntBASIC0.21□□□□□ -2.38
TRAV41A0A0B4J266 MIRLET7D-201ENST00000362263 87 ntBASIC0.21□□□□□ -2.38
TRAV41A0A0B4J266 Y_RNA.135-201ENST00000363439 95 ntBASIC0.21□□□□□ -2.38
TRAV41A0A0B4J266 RNU5F-3P-201ENST00000363767 117 ntBASIC0.21□□□□□ -2.38
TRAV41A0A0B4J266 MIR489-201ENST00000384923 84 ntBASIC0.21□□□□□ -2.38
TRAV41A0A0B4J266 MIR520C-201ENST00000385005 87 ntBASIC0.21□□□□□ -2.38
TRAV41A0A0B4J266 MIR520G-201ENST00000385064 90 ntBASIC0.21□□□□□ -2.38
TRAV41A0A0B4J266 MIR1827-201ENST00000408549 66 ntBASIC0.21□□□□□ -2.38
TRAV41A0A0B4J266 ACA59.1-201ENST00000515966 143 ntBASIC0.21□□□□□ -2.38
TRAV41A0A0B4J266 RNU6-1114P-201ENST00000516022 107 ntBASIC0.21□□□□□ -2.38
TRAV41A0A0B4J266 RNU6-1278P-201ENST00000516130 107 ntBASIC0.21□□□□□ -2.38
TRAV41A0A0B4J266 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.21□□□□□ -2.38
TRAV41A0A0B4J266 AC119751.7-201ENST00000600494 245 ntBASIC0.21□□□□□ -2.38
TRAV41A0A0B4J266 PVT1_3.1-201ENST00000620853 95 ntBASIC0.21□□□□□ -2.38
TRAV41A0A0B4J266 AC127459.3-201ENST00000624328 466 ntBASIC0.21□□□□□ -2.38
TRAV41A0A0B4J266 AC068137.3-201ENST00000639191 341 ntBASIC0.21□□□□□ -2.38
TRAV41A0A0B4J266 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
TRAV41A0A0B4J266 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
TRAV41A0A0B4J266 AC090625.1-201ENST00000357130 210 ntBASIC0.2□□□□□ -2.38
TRAV41A0A0B4J266 SNORD68-201ENST00000363214 84 ntBASIC0.2□□□□□ -2.38
TRAV41A0A0B4J266 RNU6-454P-201ENST00000364292 107 ntBASIC0.2□□□□□ -2.38
TRAV41A0A0B4J266 RNU6-306P-201ENST00000384617 107 ntBASIC0.2□□□□□ -2.38
TRAV41A0A0B4J266 MIR329-1-201ENST00000385028 80 ntBASIC0.2□□□□□ -2.38
TRAV41A0A0B4J266 SNORD105-201ENST00000386910 85 ntBASIC0.2□□□□□ -2.38
TRAV41A0A0B4J266 MTCYBP4-201ENST00000401524 249 ntBASIC0.2□□□□□ -2.38
TRAV41A0A0B4J266 RNA5SP95-201ENST00000410319 137 ntBASIC0.2□□□□□ -2.38
TRAV41A0A0B4J266 RNU6-1304P-201ENST00000411374 106 ntBASIC0.2□□□□□ -2.38
TRAV41A0A0B4J266 Y_RNA.717-201ENST00000517106 92 ntBASIC0.2□□□□□ -2.38
TRAV41A0A0B4J266 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.2□□□□□ -2.38
TRAV41A0A0B4J266 AL158211.1-201ENST00000566763 763 ntBASIC0.2□□□□□ -2.38
TRAV41A0A0B4J266 MIR4764-201ENST00000580680 88 ntBASIC0.2□□□□□ -2.38
TRAV41A0A0B4J266 MIR3672-201ENST00000584290 82 ntBASIC0.2□□□□□ -2.38
TRAV41A0A0B4J266 AC010525.2-201ENST00000590920 195 ntBASIC0.2□□□□□ -2.38
TRAV41A0A0B4J266 AC005828.6-201ENST00000606610 232 ntBASIC0.2□□□□□ -2.38
TRAV41A0A0B4J266 AC019193.3-201ENST00000609144 554 ntBASIC0.2□□□□□ -2.38
TRAV41A0A0B4J266 AL591926.4-201ENST00000616895 298 ntBASIC0.2□□□□□ -2.38
TRAV41A0A0B4J266 AC023510.2-201ENST00000622162 746 ntBASIC0.2□□□□□ -2.38
TRAV41A0A0B4J266 Z69908.1-201ENST00000622603 247 ntBASIC0.2□□□□□ -2.38
TRAV41A0A0B4J266 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.2□□□□□ -2.38
TRAV41A0A0B4J266 RNU6-369P-201ENST00000362515 102 ntBASIC0.19□□□□□ -2.38
TRAV41A0A0B4J266 U8.5-201ENST00000364528 136 ntBASIC0.19□□□□□ -2.38
TRAV41A0A0B4J266 Y_RNA.373-201ENST00000365600 103 ntBASIC0.19□□□□□ -2.38
TRAV41A0A0B4J266 RNU6-342P-201ENST00000384521 104 ntBASIC0.19□□□□□ -2.38
TRAV41A0A0B4J266 Y_RNA.553-201ENST00000384670 102 ntBASIC0.19□□□□□ -2.38
TRAV41A0A0B4J266 MIR140-201ENST00000385282 100 ntBASIC0.19□□□□□ -2.38
TRAV41A0A0B4J266 MIR873-201ENST00000401120 77 ntBASIC0.19□□□□□ -2.38
TRAV41A0A0B4J266 SNORD111-201ENST00000408139 94 ntBASIC0.19□□□□□ -2.38
TRAV41A0A0B4J266 RNU6-994P-201ENST00000410507 111 ntBASIC0.19□□□□□ -2.38
TRAV41A0A0B4J266 RNU6-177P-201ENST00000411257 104 ntBASIC0.19□□□□□ -2.38
TRAV41A0A0B4J266 AL392103.1-201ENST00000447000 198 ntBASIC0.19□□□□□ -2.38
TRAV41A0A0B4J266 RNU7-175P-201ENST00000515915 61 ntBASIC0.19□□□□□ -2.38
TRAV41A0A0B4J266 SNORA18.7-201ENST00000516910 131 ntBASIC0.19□□□□□ -2.38
TRAV41A0A0B4J266 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.19□□□□□ -2.38
TRAV41A0A0B4J266 AC124303.1-201ENST00000605703 360 ntBASIC0.19□□□□□ -2.38
TRAV41A0A0B4J266 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.19□□□□□ -2.38
TRAV41A0A0B4J266 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.19□□□□□ -2.38
TRAV41A0A0B4J266 MIR6863-201ENST00000636112 90 ntBASIC0.19□□□□□ -2.38
TRAV41A0A0B4J266 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
TRAV41A0A0B4J266 Y_RNA.106-201ENST00000363189 100 ntBASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 RNU6-595P-201ENST00000363944 107 ntBASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 RNA5SP48-201ENST00000363969 126 ntBASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 Y_RNA.212-201ENST00000364177 102 ntBASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 SNORD14.1-201ENST00000365609 90 ntBASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 RNU6-780P-201ENST00000391030 104 ntBASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 DEFB108C-201ENST00000400154 252 ntBASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 RNA5SP511-201ENST00000410487 115 ntBASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 AL354751.2-201ENST00000415471 210 ntBASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 USP9YP16-201ENST00000430287 407 ntBASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 UQCRBP2-201ENST00000447827 297 ntBASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 USP9YP23-201ENST00000455085 407 ntBASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 AC067940.1-201ENST00000458411 300 ntBASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 RNU6-256P-201ENST00000516747 97 ntBASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 MIR3684-201ENST00000579779 74 ntBASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 RN7SL793P-201ENST00000583259 296 ntBASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 MIR4762-201ENST00000585261 75 ntBASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 AC121247.2-201ENST00000604776 136 ntBASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 AC092954.2-201ENST00000609103 430 ntBASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 AL136317.1-201ENST00000612653 226 ntBASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 AC010487.4-201ENST00000637027 61 ntBASIC0.18□□□□□ -2.38
TRAV41A0A0B4J266 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms